RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 IQCA1LA6NCM1 817 aa14.94□□□□□ -0.02
RFFL-201ENST00000315249 TMEM191BP0C7N4 346 aa14.94□□□□□ -0.02
RFFL-201ENST00000315249 CDK12Q9NYV4 1490 aaPredicted RBP14.94□□□□□ -0.02
RFFL-201ENST00000315249 STK10O94804 968 aaKnown RBP14.94□□□□□ -0.02
RFFL-201ENST00000315249 FOSP01100 380 aaPredicted RBP14.94□□□□□ -0.02
RFFL-201ENST00000315249 ATP2A2P16615 1042 aaKnown RBP14.94□□□□□ -0.02
RFFL-201ENST00000315249 NFIXQ14938 502 aa14.94□□□□□ -0.02
RFFL-201ENST00000315249 TAB2Q9NYJ8 693 aa14.94□□□□□ -0.02
RFFL-201ENST00000315249 ADCY9O60503 1353 aa14.93□□□□□ -0.02
RFFL-201ENST00000315249 ARMCX5Q6P1M9 558 aa14.93□□□□□ -0.02
RFFL-201ENST00000315249 PUS7LQ9H0K6 701 aaKnown RBP14.93□□□□□ -0.02
RFFL-201ENST00000315249 ZMYM1Q5SVZ6 1142 aa14.93□□□□□ -0.02
RFFL-201ENST00000315249 STIM2Q9P246 746 aa14.93□□□□□ -0.02
RFFL-201ENST00000315249 ZNF215Q9UL58 517 aaPredicted RBP14.93□□□□□ -0.02
RFFL-201ENST00000315249 MYO3BQ8WXR4 1341 aa14.93□□□□□ -0.02
RFFL-201ENST00000315249 IQGAP3Q86VI3 1631 aa14.93□□□□□ -0.02
RFFL-201ENST00000315249 GSPT1P15170 499 aaKnown RBP14.93□□□□□ -0.02
RFFL-201ENST00000315249 TFDP1Q14186 410 aa14.93□□□□□ -0.02
RFFL-201ENST00000315249 FTOQ9C0B1 505 aaKnown RBP eCLIP14.93□□□□□ -0.02
RFFL-201ENST00000315249 CD209Q9NNX6 404 aa14.93□□□□□ -0.02
RFFL-201ENST00000315249 KIAA1024Q9UPX6 916 aa14.93□□□□□ -0.02
RFFL-201ENST00000315249 RABGAP1Q9Y3P9 1069 aa14.93□□□□□ -0.02
RFFL-201ENST00000315249 BTBD18B2RXH4 712 aa14.93□□□□□ -0.02
RFFL-201ENST00000315249 SLC7A3Q8WY07 619 aa14.93□□□□□ -0.02
RFFL-201ENST00000315249 SERTAD1Q9UHV2 236 aa14.93□□□□□ -0.02
RFFL-201ENST00000315249 ADGRB3O60242 1522 aa14.93□□□□□ -0.02
RFFL-201ENST00000315249 PLA2R1Q13018 1463 aa14.93□□□□□ -0.02
RFFL-201ENST00000315249 TLR3O15455 904 aaKnown RBP14.92□□□□□ -0.02
RFFL-201ENST00000315249 HOXA13P31271 388 aaPredicted RBP14.92□□□□□ -0.02
RFFL-201ENST00000315249 ARPP19P56211 112 aa14.92□□□□□ -0.02
RFFL-201ENST00000315249 PTPN12Q05209 780 aaKnown RBP14.92□□□□□ -0.02
RFFL-201ENST00000315249 PNOCQ13519 176 aa14.92□□□□□ -0.02
RFFL-201ENST00000315249 GPR108Q9NPR9 543 aa14.92□□□□□ -0.02
RFFL-201ENST00000315249 YWHAEP62258 255 aaKnown RBP14.92□□□□□ -0.02
RFFL-201ENST00000315249 PPP2R5CQ13362 524 aa14.92□□□□□ -0.02
RFFL-201ENST00000315249 PTGDRQ13258 359 aa14.92□□□□□ -0.02
RFFL-201ENST00000315249 GEN1Q17RS7 908 aa14.92□□□□□ -0.02
RFFL-201ENST00000315249 PIGSQ96S52 555 aa14.92□□□□□ -0.02
RFFL-201ENST00000315249 KDM2BQ8NHM5 1336 aa14.92□□□□□ -0.02
RFFL-201ENST00000315249 EIF2AK2P19525 551 aaKnown RBP14.92□□□□□ -0.02
RFFL-201ENST00000315249 ERCC5P28715 1186 aaPredicted RBP14.92□□□□□ -0.02
RFFL-201ENST00000315249 SCYL2Q6P3W7 929 aa14.92□□□□□ -0.02
RFFL-201ENST00000315249 FOXP4Q8IVH2 680 aaPredicted RBP14.92□□□□□ -0.02
RFFL-201ENST00000315249 ATP6V0A1Q93050 837 aa14.92□□□□□ -0.02
RFFL-201ENST00000315249 SRRTQ9BXP5 876 aaKnown RBP14.92□□□□□ -0.02
RFFL-201ENST00000315249 LARSQ9P2J5 1176 aaKnown RBP14.92□□□□□ -0.02
RFFL-201ENST00000315249 ARHGAP31Q2M1Z3 1444 aa14.92□□□□□ -0.02
RFFL-201ENST00000315249 GPSM2P81274 684 aa14.92□□□□□ -0.02
RFFL-201ENST00000315249 GALNT17Q6IS24 598 aa14.92□□□□□ -0.02
RFFL-201ENST00000315249 BAG1Q99933 345 aaPredicted RBP14.92□□□□□ -0.02
RFFL-201ENST00000315249 TRMT44Q8IYL2 757 aaKnown RBP14.91□□□□□ -0.02
RFFL-201ENST00000315249 MRRFQ96E11 262 aaKnown RBP14.91□□□□□ -0.02
RFFL-201ENST00000315249 RNF17Q9BXT8 1623 aaKnown RBP14.91□□□□□ -0.02
RFFL-201ENST00000315249 XRCC5P13010 732 aaKnown RBP14.91□□□□□ -0.02
RFFL-201ENST00000315249 KIAA1524Q8TCG1 905 aa14.91□□□□□ -0.02
RFFL-201ENST00000315249 CTTNBP2NLQ9P2B4 639 aa14.91□□□□□ -0.02
RFFL-201ENST00000315249 STK25O00506 426 aa14.91□□□□□ -0.02
RFFL-201ENST00000315249 PODNQ7Z5L7 613 aa14.91□□□□□ -0.02
RFFL-201ENST00000315249 MYOCDQ8IZQ8 938 aa14.91□□□□□ -0.02
RFFL-201ENST00000315249 SYNJ2BP-COX16A0A087WUM0 186 aa14.91□□□□□ -0.02
RFFL-201ENST00000315249 PRDX5P30044 214 aa14.91□□□□□ -0.02
RFFL-201ENST00000315249 SLC9C1Q4G0N8 1177 aa14.91□□□□□ -0.02
RFFL-201ENST00000315249 ZNF589Q86UQ0 364 aaPredicted RBP14.91□□□□□ -0.02
RFFL-201ENST00000315249 NLRC4Q9NPP4 1024 aa14.91□□□□□ -0.02
RFFL-201ENST00000315249 COX16Q9P0S2 106 aa14.91□□□□□ -0.02
RFFL-201ENST00000315249 OATP04181 439 aa14.91□□□□□ -0.02
RFFL-201ENST00000315249 MTERF2Q49AM1 385 aa14.91□□□□□ -0.02
RFFL-201ENST00000315249 GSDMBQ8TAX9 411 aa14.91□□□□□ -0.02
RFFL-201ENST00000315249 HAUS2Q9NVX0 235 aa14.91□□□□□ -0.02
RFFL-201ENST00000315249 SOS2Q07890 1332 aaPredicted RBP14.91□□□□□ -0.02
RFFL-201ENST00000315249 CAMSAP1Q5T5Y3 1602 aa14.91□□□□□ -0.02
RFFL-201ENST00000315249 HOXD10P28358 340 aa14.91□□□□□ -0.02
RFFL-201ENST00000315249 CSRNP2Q9H175 543 aa14.91□□□□□ -0.02
RFFL-201ENST00000315249 TPCN1Q9ULQ1 816 aa14.91□□□□□ -0.02
RFFL-201ENST00000315249 CEP170P1Q96L14 293 aa14.9□□□□□ -0.02
RFFL-201ENST00000315249 RNF123Q5XPI4 1314 aa14.9□□□□□ -0.02
RFFL-201ENST00000315249 NKX1-1Q15270 411 aaPredicted RBP14.9□□□□□ -0.02
RFFL-201ENST00000315249 EZH2Q15910 746 aaKnown RBP14.9□□□□□ -0.02
RFFL-201ENST00000315249 ODR4Q5SWX8 454 aa14.9□□□□□ -0.02
RFFL-201ENST00000315249 MLKLQ8NB16 471 aa14.9□□□□□ -0.02
RFFL-201ENST00000315249 FAM207AQ9NSI2 230 aaPredicted RBP14.9□□□□□ -0.02
RFFL-201ENST00000315249 GRIN3BO60391 1043 aa14.9□□□□□ -0.02
RFFL-201ENST00000315249 PIK3CAP42336 1068 aa14.9□□□□□ -0.02
RFFL-201ENST00000315249 PDXDC2PQ6P474 469 aa14.9□□□□□ -0.02
RFFL-201ENST00000315249 H0YCG3 227 aa14.9□□□□□ -0.02
RFFL-201ENST00000315249 HNRNPDLO14979 420 aaKnown RBP14.9□□□□□ -0.02
RFFL-201ENST00000315249 IPO4Q8TEX9 1081 aaKnown RBP14.9□□□□□ -0.02
RFFL-201ENST00000315249 CLSTN2Q9H4D0 955 aa14.9□□□□□ -0.02
RFFL-201ENST00000315249 PIH1D3Q9NQM4 214 aaKnown RBP14.9□□□□□ -0.02
RFFL-201ENST00000315249 DISC1Q9NRI5 854 aa14.9□□□□□ -0.02
RFFL-201ENST00000315249 SRGAP2CP0DJJ0 459 aa14.9□□□□□ -0.02
RFFL-201ENST00000315249 CASC4Q6P4E1 433 aa14.9□□□□□ -0.02
RFFL-201ENST00000315249 RNF207Q6ZRF8 634 aa14.9□□□□□ -0.02
RFFL-201ENST00000315249 FAM49AQ9H0Q0 323 aaPredicted RBP14.9□□□□□ -0.02
RFFL-201ENST00000315249 GPBP1L1Q9HC44 474 aaPredicted RBP14.9□□□□□ -0.02
RFFL-201ENST00000315249 TLDC2A0PJX2 215 aa14.9□□□□□ -0.02
RFFL-201ENST00000315249 CALCOCO2Q13137 446 aa14.9□□□□□ -0.02
RFFL-201ENST00000315249 UBE2SQ16763 222 aa14.9□□□□□ -0.02
RFFL-201ENST00000315249 CDHR1Q96JP9 859 aa14.9□□□□□ -0.02
RFFL-201ENST00000315249 SPP2Q13103 211 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms