RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 CCDC148Q8NFR7 591 aa8.15□□□□□ -1.1
RGPD3-201ENST00000304514 POLRMTO00411 1230 aaKnown RBP8.15□□□□□ -1.1
RGPD3-201ENST00000304514 ZRANB2O95218 330 aaKnown RBP eCLIP8.15□□□□□ -1.1
RGPD3-201ENST00000304514 COPB1P53618 953 aaKnown RBP8.15□□□□□ -1.1
RGPD3-201ENST00000304514 STAMQ92783 540 aa8.15□□□□□ -1.1
RGPD3-201ENST00000304514 DESI2Q9BSY9 194 aa8.15□□□□□ -1.1
RGPD3-201ENST00000304514 CCSER1Q9C0I3 900 aa8.15□□□□□ -1.1
RGPD3-201ENST00000304514 ZMYND15Q9H091 742 aa8.15□□□□□ -1.1
RGPD3-201ENST00000304514 THAP9Q9H5L6 903 aa8.15□□□□□ -1.1
RGPD3-201ENST00000304514 GDAQ9Y2T3 454 aa8.15□□□□□ -1.1
RGPD3-201ENST00000304514 RASSF10A6NK89 507 aa8.15□□□□□ -1.11
RGPD3-201ENST00000304514 BAG3O95817 575 aa8.15□□□□□ -1.11
RGPD3-201ENST00000304514 SNHG28P0DPA3 235 aa8.15□□□□□ -1.11
RGPD3-201ENST00000304514 FXR1P51114 621 aaKnown RBP eCLIP8.15□□□□□ -1.11
RGPD3-201ENST00000304514 CLCN6P51797 869 aa8.15□□□□□ -1.11
RGPD3-201ENST00000304514 FAM196AQ6ZSG2 479 aa8.15□□□□□ -1.11
RGPD3-201ENST00000304514 GIMAP8Q8ND71 665 aaPredicted RBP8.15□□□□□ -1.11
RGPD3-201ENST00000304514 NGLY1Q96IV0 654 aa8.15□□□□□ -1.11
RGPD3-201ENST00000304514 PRDM10Q9NQV6 1147 aa8.15□□□□□ -1.11
RGPD3-201ENST00000304514 NRDCO43847 1150 aa8.15□□□□□ -1.11
RGPD3-201ENST00000304514 STAT6P42226 847 aa8.15□□□□□ -1.11
RGPD3-201ENST00000304514 GNAQP50148 359 aa8.15□□□□□ -1.11
RGPD3-201ENST00000304514 HEATR3Q7Z4Q2 680 aa8.15□□□□□ -1.11
RGPD3-201ENST00000304514 NEDD1Q8NHV4 660 aa8.15□□□□□ -1.11
RGPD3-201ENST00000304514 TBC1D16Q8TBP0 767 aa8.15□□□□□ -1.11
RGPD3-201ENST00000304514 DNAJC7Q99615 494 aa8.15□□□□□ -1.11
RGPD3-201ENST00000304514 TRIM49BA6NDI0 452 aa8.14□□□□□ -1.11
RGPD3-201ENST00000304514 HOXA10P31260 410 aaPredicted RBP8.14□□□□□ -1.11
RGPD3-201ENST00000304514 ORC2Q13416 577 aaPredicted RBP8.14□□□□□ -1.11
RGPD3-201ENST00000304514 INF2Q27J81 1249 aa8.14□□□□□ -1.11
RGPD3-201ENST00000304514 MTMR9Q96QG7 549 aa8.14□□□□□ -1.11
RGPD3-201ENST00000304514 UBXN6Q9BZV1 441 aa8.14□□□□□ -1.11
RGPD3-201ENST00000304514 MAGEF1Q9HAY2 307 aa8.14□□□□□ -1.11
RGPD3-201ENST00000304514 UFL1O94874 794 aa8.14□□□□□ -1.11
RGPD3-201ENST00000304514 GOLGA8HP0CJ92 632 aa8.14□□□□□ -1.11
RGPD3-201ENST00000304514 GABPAQ06546 454 aa8.14□□□□□ -1.11
RGPD3-201ENST00000304514 GJD4Q96KN9 370 aaPredicted RBP8.14□□□□□ -1.11
RGPD3-201ENST00000304514 EYA3Q99504 573 aa8.14□□□□□ -1.11
RGPD3-201ENST00000304514 MMTAG2Q9BU76 263 aaKnown RBP8.14□□□□□ -1.11
RGPD3-201ENST00000304514 GTPBP4Q9BZE4 634 aaKnown RBP8.14□□□□□ -1.11
RGPD3-201ENST00000304514 TTYH3Q9C0H2 523 aa8.14□□□□□ -1.11
RGPD3-201ENST00000304514 RIOX1Q9H6W3 641 aa8.14□□□□□ -1.11
RGPD3-201ENST00000304514 ARHGAP25P42331 645 aa8.14□□□□□ -1.11
RGPD3-201ENST00000304514 DDR1Q08345 913 aa8.14□□□□□ -1.11
RGPD3-201ENST00000304514 KLHL10Q6JEL2 608 aa8.14□□□□□ -1.11
RGPD3-201ENST00000304514 C7orf25Q9BPX7 421 aa8.14□□□□□ -1.11
RGPD3-201ENST00000304514 CLK2P49760 499 aaKnown RBP8.14□□□□□ -1.11
RGPD3-201ENST00000304514 TRIM14Q14142 442 aa8.14□□□□□ -1.11
RGPD3-201ENST00000304514 CEP95Q96GE4 821 aa8.14□□□□□ -1.11
RGPD3-201ENST00000304514 AK8Q96MA6 479 aa8.14□□□□□ -1.11
RGPD3-201ENST00000304514 MKNK2Q9HBH9 465 aa8.14□□□□□ -1.11
RGPD3-201ENST00000304514 GGA1Q9UJY5 639 aa8.14□□□□□ -1.11
RGPD3-201ENST00000304514 USP17L5A8MUK1 530 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 hCG_1984214I3L0E3 225 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 PARP1P09874 1014 aaKnown RBP8.13□□□□□ -1.11
RGPD3-201ENST00000304514 CDC25AP30304 524 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 ST5P78524 1137 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 HOMER1Q86YM7 354 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 ZNF713Q8N859 430 aaPredicted RBP8.13□□□□□ -1.11
RGPD3-201ENST00000304514 CCDC34Q96HJ3 373 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 CUEDC2Q9H467 287 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 REXO2Q9Y3B8 237 aaKnown RBP8.13□□□□□ -1.11
RGPD3-201ENST00000304514 EP400Q96L91 3159 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 ESYT2A0FGR8 921 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 CCDC175P0C221 793 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 CCT6AP40227 531 aaKnown RBP8.13□□□□□ -1.11
RGPD3-201ENST00000304514 DTHD1Q6ZMT9 781 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 CNGA4Q8IV77 575 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 MB21D1Q8N884 522 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 RPGRQ92834 1020 aaKnown RBP8.13□□□□□ -1.11
RGPD3-201ENST00000304514 CRAMP1Q96RY5 1269 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 DUSP9Q99956 384 aaKnown RBP8.13□□□□□ -1.11
RGPD3-201ENST00000304514 ABL1P00519 1130 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 MIIPQ5JXC2 388 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 TTI2Q6NXR4 508 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 AMOTL1Q8IY63 956 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 A0A1W2PQC6 194 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 KLRF2D3W0D1 207 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 PPP2R3AQ06190 1150 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 ZNF444Q8N0Y2 327 aaPredicted RBP8.13□□□□□ -1.11
RGPD3-201ENST00000304514 DAGLAQ9Y4D2 1042 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 CCNT1O60563 726 aaKnown RBP8.13□□□□□ -1.11
RGPD3-201ENST00000304514 PPP1R11O60927 126 aaPredicted RBP8.13□□□□□ -1.11
RGPD3-201ENST00000304514 LDHCP07864 332 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 PDHBP11177 359 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 PLCG1P19174 1290 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 CNNM4Q6P4Q7 775 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 KRT25Q7Z3Z0 450 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 POTEDQ86YR6 584 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 PIGSQ96S52 555 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 CPVLQ9H3G5 476 aa8.13□□□□□ -1.11
RGPD3-201ENST00000304514 CCDC194A0A1B0GVG4 234 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 SERPINB2P05120 415 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 OR52Z1P0C646 297 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 SLC27A3Q5K4L6 730 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 RRP36Q96EU6 259 aaKnown RBP8.12□□□□□ -1.11
RGPD3-201ENST00000304514 TMEM260Q9NX78 707 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 TAB2Q9NYJ8 693 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 MYO3BQ8WXR4 1341 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 FER1L6Q2WGJ9 1857 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms