RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 GUCY1A3Q02108 690 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 DIXDC1Q155Q3 683 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 KIRREL3Q8IZU9 778 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 RPGRQ92834 1020 aaKnown RBP11.24□□□□□ -0.61
PALB2-201ENST00000261584 LBHD1Q9BQE6 289 aaPredicted RBP11.24□□□□□ -0.61
PALB2-201ENST00000261584 NEURL4Q96JN8 1562 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 GSG1L2A8MUP6 293 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 RIMBP2O15034 1052 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 CALM1P0DP23 149 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 CALM2P0DP24 149 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 CALM3P0DP25 149 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 APBA1Q02410 837 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 MAP2K1Q02750 393 aaPredicted RBP11.24□□□□□ -0.61
PALB2-201ENST00000261584 CHRNDQ07001 517 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 NLRP10Q86W26 655 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 FAM212AQ96EL1 285 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 LACRTQ9GZZ8 138 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 GGT7Q9UJ14 662 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 FANCGO15287 622 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 CHMP2AO43633 222 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 SEC24CP53992 1094 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 RASGRP2Q7LDG7 609 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 ENAHQ8N8S7 591 aaPredicted RBP11.23□□□□□ -0.61
PALB2-201ENST00000261584 OR2W6PQ8NHA6 318 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 HDAC7Q8WUI4 952 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 ANKZF1Q9H8Y5 726 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 GOLGA6L10A0A0M3HER8 536 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 ZSCAN5CA6NGD5 496 aaPredicted RBP11.23□□□□□ -0.61
PALB2-201ENST00000261584 WNT7AO00755 349 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 VIMP08670 466 aaKnown RBP11.23□□□□□ -0.61
PALB2-201ENST00000261584 SCG2P13521 617 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 SLCO1A2P46721 670 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 VPS41P49754 854 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 GFPT1Q06210 699 aaPredicted RBP11.23□□□□□ -0.61
PALB2-201ENST00000261584 NR1I3Q14994 352 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 TMEM266Q2M3C6 531 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 HERC4Q5GLZ8 1057 aaPredicted RBP11.23□□□□□ -0.61
PALB2-201ENST00000261584 BEND6Q5SZJ8 279 aaPredicted RBP11.23□□□□□ -0.61
PALB2-201ENST00000261584 SNX29Q8TEQ0 813 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 HAUS4Q9H6D7 363 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 FAM169AQ9Y6X4 670 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 USP31Q70CQ4 1352 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 HEXIM1O94992 359 aaKnown RBP11.23□□□□□ -0.61
PALB2-201ENST00000261584 ERCC5P28715 1186 aaPredicted RBP11.23□□□□□ -0.61
PALB2-201ENST00000261584 KIAA0753Q2KHM9 967 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 USP17L2Q6R6M4 530 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 AEBP2Q6ZN18 517 aaPredicted RBP11.23□□□□□ -0.61
PALB2-201ENST00000261584 BLIDQ8IZY5 108 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 PNMA1Q8ND90 353 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 FOXP1Q9H334 677 aaPredicted RBP11.23□□□□□ -0.61
PALB2-201ENST00000261584 TCEAL9Q9UHQ7 104 aa11.23□□□□□ -0.61
PALB2-201ENST00000261584 GSTTP1A0A1W2PQM5 241 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 NBPF5PQ86XG9 351 aaPredicted RBP11.22□□□□□ -0.61
PALB2-201ENST00000261584 LRRC47Q8N1G4 583 aaKnown RBP11.22□□□□□ -0.61
PALB2-201ENST00000261584 THOC1Q96FV9 657 aaKnown RBP11.22□□□□□ -0.61
PALB2-201ENST00000261584 CABS1Q96KC9 395 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 GSDMAQ96QA5 445 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 NAA15Q9BXJ9 866 aaKnown RBP11.22□□□□□ -0.61
PALB2-201ENST00000261584 DNAJC17Q9NVM6 304 aaKnown RBP11.22□□□□□ -0.61
PALB2-201ENST00000261584 ADD3Q9UEY8 706 aaKnown RBP11.22□□□□□ -0.61
PALB2-201ENST00000261584 ADAMTS1Q9UHI8 967 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 ZBTB21Q9ULJ3 1066 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 ANKRD62A6NC57 917 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 UBE3CQ15386 1083 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 KRT71Q3SY84 523 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 STAG2Q8N3U4 1231 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 COG1Q8WTW3 980 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 FERMT2Q96AC1 680 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 RTL9Q8NET4 1388 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 RICTORQ6R327 1708 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 PLCG1P19174 1290 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 AMPD3Q01432 767 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 DPYDQ12882 1025 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 NNTQ13423 1086 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 RABL6Q3YEC7 729 aaPredicted RBP11.22□□□□□ -0.61
PALB2-201ENST00000261584 DAAM2Q86T65 1068 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 FCHSD1Q86WN1 690 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 PIGBQ92521 554 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 PANX2Q96RD6 677 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 LSM14BQ9BX40 385 aaKnown RBP11.22□□□□□ -0.61
PALB2-201ENST00000261584 MLXIPLQ9NP71 852 aa11.22□□□□□ -0.61
PALB2-201ENST00000261584 ARHGEF28Q8N1W1 1705 aaKnown RBP11.22□□□□□ -0.61
PALB2-201ENST00000261584 SMCO2A6NFE2 343 aa11.21□□□□□ -0.61
PALB2-201ENST00000261584 GTPBP6O43824 516 aaPredicted RBP11.21□□□□□ -0.61
PALB2-201ENST00000261584 PCCAP05165 728 aaPredicted RBP11.21□□□□□ -0.61
PALB2-201ENST00000261584 PRDX5P30044 214 aa11.21□□□□□ -0.61
PALB2-201ENST00000261584 NF2P35240 595 aa11.21□□□□□ -0.61
PALB2-201ENST00000261584 CCDC93Q567U6 631 aa11.21□□□□□ -0.61
PALB2-201ENST00000261584 SV2BQ7L1I2 683 aa11.21□□□□□ -0.61
PALB2-201ENST00000261584 FAM114A1Q8IWE2 563 aa11.21□□□□□ -0.61
PALB2-201ENST00000261584 COA7Q96BR5 231 aa11.21□□□□□ -0.61
PALB2-201ENST00000261584 BPIFA3Q9BQP9 254 aa11.21□□□□□ -0.61
PALB2-201ENST00000261584 PCDHB13Q9Y5F0 798 aa11.21□□□□□ -0.61
PALB2-201ENST00000261584 ZRANB2O95218 330 aaKnown RBP eCLIP11.21□□□□□ -0.61
PALB2-201ENST00000261584 CYP4A11Q02928 519 aa11.21□□□□□ -0.61
PALB2-201ENST00000261584 KLHL30Q0D2K2 578 aa11.21□□□□□ -0.61
PALB2-201ENST00000261584 KRT79Q5XKE5 535 aa11.21□□□□□ -0.61
PALB2-201ENST00000261584 MB21D1Q8N884 522 aa11.21□□□□□ -0.61
PALB2-201ENST00000261584 KCNK9Q9NPC2 374 aa11.21□□□□□ -0.61
PALB2-201ENST00000261584 DMGDHQ9UI17 866 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms