RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 NAPAP54920 295 aa28.74■■■□□ 2.19
RAB40C-201ENST00000248139 TXNRD1Q16881 649 aa28.74■■■□□ 2.19
RAB40C-201ENST00000248139 ANKRD20A12PQ8NF67 263 aa28.74■■■□□ 2.19
RAB40C-201ENST00000248139 WDR66Q8TBY9 1149 aa28.74■■■□□ 2.19
RAB40C-201ENST00000248139 PALM3A6NDB9 673 aaPredicted RBP28.73■■■□□ 2.19
RAB40C-201ENST00000248139 PLCG1P19174 1290 aa28.73■■■□□ 2.19
RAB40C-201ENST00000248139 BTDP43251 543 aa28.73■■■□□ 2.19
RAB40C-201ENST00000248139 TMTC1Q8IUR5 882 aa28.73■■■□□ 2.19
RAB40C-201ENST00000248139 SH3GLB2Q9NR46 395 aa28.73■■■□□ 2.19
RAB40C-201ENST00000248139 BAG3O95817 575 aa28.73■■■□□ 2.19
RAB40C-201ENST00000248139 RABGGTAQ92696 567 aa28.73■■■□□ 2.19
RAB40C-201ENST00000248139 GUCA1BQ9UMX6 200 aa28.73■■■□□ 2.19
RAB40C-201ENST00000248139 REXO2Q9Y3B8 237 aaKnown RBP28.73■■■□□ 2.19
RAB40C-201ENST00000248139 RFC4P35249 363 aa28.72■■■□□ 2.19
RAB40C-201ENST00000248139 SPAG1Q07617 926 aa28.72■■■□□ 2.19
RAB40C-201ENST00000248139 CYP26C1Q6V0L0 522 aa28.72■■■□□ 2.19
RAB40C-201ENST00000248139 SRGAP1Q7Z6B7 1085 aa28.72■■■□□ 2.19
RAB40C-201ENST00000248139 GPIHBP1Q8IV16 184 aa28.72■■■□□ 2.19
RAB40C-201ENST00000248139 CDC23Q9UJX2 597 aa28.72■■■□□ 2.19
RAB40C-201ENST00000248139 B4DLN1 442 aa28.72■■■□□ 2.19
RAB40C-201ENST00000248139 TECP42680 631 aa28.72■■■□□ 2.19
RAB40C-201ENST00000248139 EYA3Q99504 573 aa28.72■■■□□ 2.19
RAB40C-201ENST00000248139 CTAGE9A4FU28 777 aa28.71■■■□□ 2.19
RAB40C-201ENST00000248139 RHOXF2BP0C7M4 288 aa28.71■■■□□ 2.19
RAB40C-201ENST00000248139 FCER1AP12319 257 aa28.71■■■□□ 2.19
RAB40C-201ENST00000248139 CDK8P49336 464 aa28.71■■■□□ 2.19
RAB40C-201ENST00000248139 GPSM2P81274 684 aa28.71■■■□□ 2.19
RAB40C-201ENST00000248139 CCDC178Q5BJE1 867 aa28.71■■■□□ 2.19
RAB40C-201ENST00000248139 JAKMIP3Q5VZ66 844 aa28.71■■■□□ 2.19
RAB40C-201ENST00000248139 AMOTL1Q8IY63 956 aa28.71■■■□□ 2.19
RAB40C-201ENST00000248139 MB21D1Q8N884 522 aa28.71■■■□□ 2.19
RAB40C-201ENST00000248139 RHOXF2Q9BQY4 288 aa28.71■■■□□ 2.19
RAB40C-201ENST00000248139 PYM1Q9BRP8 204 aaKnown RBP28.71■■■□□ 2.19
RAB40C-201ENST00000248139 RTFDC1Q9BY42 306 aaPredicted RBP28.71■■■□□ 2.19
RAB40C-201ENST00000248139 BIN2Q9UBW5 565 aaPredicted RBP28.71■■■□□ 2.19
RAB40C-201ENST00000248139 TNRC6CQ9HCJ0 1690 aaKnown RBP28.71■■■□□ 2.19
RAB40C-201ENST00000248139 SMCO2A6NFE2 343 aa28.71■■■□□ 2.19
RAB40C-201ENST00000248139 H7C1D1 291 aa28.71■■■□□ 2.19
RAB40C-201ENST00000248139 GYS2P54840 703 aa28.71■■■□□ 2.19
RAB40C-201ENST00000248139 GRAPQ13588 217 aa28.71■■■□□ 2.19
RAB40C-201ENST00000248139 GRAPLQ8TC17 118 aaPredicted RBP28.71■■■□□ 2.19
RAB40C-201ENST00000248139 ANKS1AQ92625 1134 aa28.71■■■□□ 2.19
RAB40C-201ENST00000248139 CCDC51Q96ER9 411 aa28.71■■■□□ 2.19
RAB40C-201ENST00000248139 PNKPQ96T60 521 aa28.71■■■□□ 2.19
RAB40C-201ENST00000248139 ARFGAP3Q9NP61 516 aa28.71■■■□□ 2.19
RAB40C-201ENST00000248139 TMEM260Q9NX78 707 aa28.71■■■□□ 2.19
RAB40C-201ENST00000248139 ENC1O14682 589 aa28.7■■■□□ 2.19
RAB40C-201ENST00000248139 ANKZF1Q9H8Y5 726 aa28.7■■■□□ 2.19
RAB40C-201ENST00000248139 SUGCTQ9HAC7 445 aa28.7■■■□□ 2.19
RAB40C-201ENST00000248139 GNAQP50148 359 aa28.7■■■□□ 2.18
RAB40C-201ENST00000248139 STK4Q13043 487 aa28.7■■■□□ 2.18
RAB40C-201ENST00000248139 RC3H1Q5TC82 1133 aaKnown RBP28.7■■■□□ 2.18
RAB40C-201ENST00000248139 CABP7Q86V35 215 aa28.7■■■□□ 2.18
RAB40C-201ENST00000248139 CLEC10AQ8IUN9 316 aa28.7■■■□□ 2.18
RAB40C-201ENST00000248139 KBTBD4Q9NVX7 518 aa28.7■■■□□ 2.18
RAB40C-201ENST00000248139 TTF2Q9UNY4 1162 aaKnown RBP28.7■■■□□ 2.18
RAB40C-201ENST00000248139 EIF6P56537 245 aaKnown RBP28.69■■■□□ 2.18
RAB40C-201ENST00000248139 TEX11Q8IYF3 940 aa28.69■■■□□ 2.18
RAB40C-201ENST00000248139 CCDC148Q8NFR7 591 aa28.69■■■□□ 2.18
RAB40C-201ENST00000248139 PIGSQ96S52 555 aa28.69■■■□□ 2.18
RAB40C-201ENST00000248139 AGPAT5Q9NUQ2 364 aa28.69■■■□□ 2.18
RAB40C-201ENST00000248139 ERCC3P19447 782 aa28.69■■■□□ 2.18
RAB40C-201ENST00000248139 FECHP22830 423 aa28.69■■■□□ 2.18
RAB40C-201ENST00000248139 NCAPH2Q6IBW4 605 aa28.69■■■□□ 2.18
RAB40C-201ENST00000248139 CEP95Q96GE4 821 aa28.69■■■□□ 2.18
RAB40C-201ENST00000248139 EPN1Q9Y6I3 576 aaPredicted RBP28.69■■■□□ 2.18
RAB40C-201ENST00000248139 FRMPD2Q68DX3 1309 aaPredicted RBP28.68■■■□□ 2.18
RAB40C-201ENST00000248139 HDAC6Q9UBN7 1215 aa28.68■■■□□ 2.18
RAB40C-201ENST00000248139 FLT1P17948 1338 aa28.68■■■□□ 2.18
RAB40C-201ENST00000248139 UFL1O94874 794 aa28.68■■■□□ 2.18
RAB40C-201ENST00000248139 DUSP9Q99956 384 aaKnown RBP28.68■■■□□ 2.18
RAB40C-201ENST00000248139 NDUFA10O95299 355 aa28.67■■■□□ 2.18
RAB40C-201ENST00000248139 PDE4DQ08499 809 aa28.67■■■□□ 2.18
RAB40C-201ENST00000248139 TTI2Q6NXR4 508 aa28.67■■■□□ 2.18
RAB40C-201ENST00000248139 FAM196AQ6ZSG2 479 aa28.67■■■□□ 2.18
RAB40C-201ENST00000248139 CSGALNACT2Q8N6G5 542 aa28.67■■■□□ 2.18
RAB40C-201ENST00000248139 CNBD1Q8NA66 436 aa28.67■■■□□ 2.18
RAB40C-201ENST00000248139 FUT8Q9BYC5 575 aa28.67■■■□□ 2.18
RAB40C-201ENST00000248139 RNF216Q9NWF9 866 aaPredicted RBP28.67■■■□□ 2.18
RAB40C-201ENST00000248139 LONRF2Q1L5Z9 754 aa28.67■■■□□ 2.18
RAB40C-201ENST00000248139 ANKRD40Q6AI12 368 aa28.67■■■□□ 2.18
RAB40C-201ENST00000248139 WDR59Q6PJI9 974 aa28.67■■■□□ 2.18
RAB40C-201ENST00000248139 ZNF804AQ7Z570 1209 aa28.67■■■□□ 2.18
RAB40C-201ENST00000248139 GIMAP8Q8ND71 665 aaPredicted RBP28.67■■■□□ 2.18
RAB40C-201ENST00000248139 UIMC1Q96RL1 719 aa28.67■■■□□ 2.18
RAB40C-201ENST00000248139 USP17L5A8MUK1 530 aa28.66■■■□□ 2.18
RAB40C-201ENST00000248139 LGALS16A8MUM7 142 aa28.66■■■□□ 2.18
RAB40C-201ENST00000248139 OAS2P29728 719 aaKnown RBP28.66■■■□□ 2.18
RAB40C-201ENST00000248139 ASIC1P78348 528 aa28.66■■■□□ 2.18
RAB40C-201ENST00000248139 CCSER1Q9C0I3 900 aa28.66■■■□□ 2.18
RAB40C-201ENST00000248139 CD209Q9NNX6 404 aa28.66■■■□□ 2.18
RAB40C-201ENST00000248139 LEMD3Q9Y2U8 911 aa28.66■■■□□ 2.18
RAB40C-201ENST00000248139 LUC7L2Q9Y383 392 aaKnown RBP28.66■■■□□ 2.18
RAB40C-201ENST00000248139 PSMA7O14818 248 aa28.66■■■□□ 2.18
RAB40C-201ENST00000248139 RHOBTB3O94955 611 aa28.66■■■□□ 2.18
RAB40C-201ENST00000248139 SMC1AQ14683 1233 aaKnown RBP28.66■■■□□ 2.18
RAB40C-201ENST00000248139 POTEDQ86YR6 584 aa28.66■■■□□ 2.18
RAB40C-201ENST00000248139 ZNF507Q8TCN5 953 aa28.66■■■□□ 2.18
RAB40C-201ENST00000248139 TBCKQ8TEA7 893 aa28.66■■■□□ 2.18
RAB40C-201ENST00000248139 NAPGQ99747 312 aaPredicted RBP28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms