RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 BARHL2Q9NY43 387 aa16.46■□□□□ 0.23
CNOT3-201ENST00000221232 GUCA1BQ9UMX6 200 aa16.46■□□□□ 0.23
CNOT3-201ENST00000221232 EP400Q96L91 3159 aa16.46■□□□□ 0.23
CNOT3-201ENST00000221232 NKRFO15226 690 aaKnown RBP eCLIP16.45■□□□□ 0.225e-14■□□□□ 8.7
CNOT3-201ENST00000221232 PLCG1P19174 1290 aa16.45■□□□□ 0.22
CNOT3-201ENST00000221232 BBXQ8WY36 941 aaPredicted RBP16.45■□□□□ 0.22
CNOT3-201ENST00000221232 PCMTD1Q96MG8 357 aaPredicted RBP16.45■□□□□ 0.22
CNOT3-201ENST00000221232 RMND1Q9NWS8 449 aa16.45■□□□□ 0.22
CNOT3-201ENST00000221232 TTC26A0AVF1 554 aa16.45■□□□□ 0.22
CNOT3-201ENST00000221232 SASH3O75995 380 aa16.45■□□□□ 0.22
CNOT3-201ENST00000221232 FCER1AP12319 257 aa16.45■□□□□ 0.22
CNOT3-201ENST00000221232 TXKP42681 527 aa16.45■□□□□ 0.22
CNOT3-201ENST00000221232 CEP95Q96GE4 821 aa16.45■□□□□ 0.22
CNOT3-201ENST00000221232 CD209Q9NNX6 404 aa16.45■□□□□ 0.22
CNOT3-201ENST00000221232 USP17L5A8MUK1 530 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 B4DLN1 442 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 C6orf229H3BNL8 230 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 RAD21O60216 631 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 RHOXF2BP0C7M4 288 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 GNAQP50148 359 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 PAXIP1Q6ZW49 1069 aaPredicted RBP16.44■□□□□ 0.22
CNOT3-201ENST00000221232 CABP7Q86V35 215 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 ADSSL1Q8N142 457 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 COA7Q96BR5 231 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 RHOXF2Q9BQY4 288 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 PALM3A6NDB9 673 aaPredicted RBP16.44■□□□□ 0.22
CNOT3-201ENST00000221232 M0R2N6 131 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 ENC1O14682 589 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 MFSD14BQ5SR56 506 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 RC3H1Q5TC82 1133 aaKnown RBP16.44■□□□□ 0.22
CNOT3-201ENST00000221232 RTFDC1Q9BY42 306 aaPredicted RBP16.44■□□□□ 0.22
CNOT3-201ENST00000221232 RNF216Q9NWF9 866 aaPredicted RBP16.44■□□□□ 0.22
CNOT3-201ENST00000221232 LEMD3Q9Y2U8 911 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 IRS2Q9Y4H2 1338 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 CHMP4BP1P59074 171 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 ASIC1P78348 528 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 GSTO1P78417 241 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 CT47A1Q5JQC4 288 aaPredicted RBP16.44■□□□□ 0.22
CNOT3-201ENST00000221232 LRRC47Q8N1G4 583 aaKnown RBP16.44■□□□□ 0.22
CNOT3-201ENST00000221232 GOLGA1Q92805 767 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 GJA10Q969M2 543 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 TCP11L1Q9NUJ3 509 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 FAM53CQ9NYF3 392 aa16.44■□□□□ 0.22
CNOT3-201ENST00000221232 LRRC10BA6NIK2 292 aa16.43■□□□□ 0.22
CNOT3-201ENST00000221232 ZRANB2O95218 330 aaKnown RBP eCLIP16.43■□□□□ 0.22
CNOT3-201ENST00000221232 ATP2B2Q01814 1243 aa16.43■□□□□ 0.22
CNOT3-201ENST00000221232 PDE4DQ08499 809 aa16.43■□□□□ 0.22
CNOT3-201ENST00000221232 STK4Q13043 487 aa16.43■□□□□ 0.22
CNOT3-201ENST00000221232 CCDC148Q8NFR7 591 aa16.43■□□□□ 0.22
CNOT3-201ENST00000221232 TBCKQ8TEA7 893 aa16.43■□□□□ 0.22
CNOT3-201ENST00000221232 NAA15Q9BXJ9 866 aaKnown RBP16.43■□□□□ 0.22
CNOT3-201ENST00000221232 GPCPD1Q9NPB8 672 aa16.43■□□□□ 0.22
CNOT3-201ENST00000221232 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.43■□□□□ 0.22
CNOT3-201ENST00000221232 H7C1D1 291 aa16.43■□□□□ 0.22
CNOT3-201ENST00000221232 KLRC4O43908 158 aa16.43■□□□□ 0.22
CNOT3-201ENST00000221232 LDHCP07864 332 aa16.43■□□□□ 0.22
CNOT3-201ENST00000221232 GYS2P54840 703 aa16.43■□□□□ 0.22
CNOT3-201ENST00000221232 SOGA3Q5TF21 947 aa16.43■□□□□ 0.22
CNOT3-201ENST00000221232 CC2D1AQ6P1N0 951 aaPredicted RBP16.43■□□□□ 0.22
CNOT3-201ENST00000221232 TMTC1Q8IUR5 882 aa16.43■□□□□ 0.22
CNOT3-201ENST00000221232 CSGALNACT2Q8N6G5 542 aa16.43■□□□□ 0.22
CNOT3-201ENST00000221232 SH3GLB2Q9NR46 395 aa16.43■□□□□ 0.22
CNOT3-201ENST00000221232 MAGEC2Q9UBF1 373 aaPredicted RBP16.43■□□□□ 0.22
CNOT3-201ENST00000221232 CTAGE9A4FU28 777 aa16.42■□□□□ 0.22
CNOT3-201ENST00000221232 GABPB1Q06547 395 aaPredicted RBP16.42■□□□□ 0.22
CNOT3-201ENST00000221232 PRR5LQ6MZQ0 368 aa16.42■□□□□ 0.22
CNOT3-201ENST00000221232 CYP26C1Q6V0L0 522 aa16.42■□□□□ 0.22
CNOT3-201ENST00000221232 RSRC2Q7L4I2 434 aaKnown RBP16.42■□□□□ 0.22
CNOT3-201ENST00000221232 DYMQ7RTS9 669 aa16.42■□□□□ 0.22
CNOT3-201ENST00000221232 GPR161Q8N6U8 529 aaKnown RBP16.42■□□□□ 0.22
CNOT3-201ENST00000221232 MB21D1Q8N884 522 aa16.42■□□□□ 0.22
CNOT3-201ENST00000221232 MXD3Q9BW11 206 aa16.42■□□□□ 0.22
CNOT3-201ENST00000221232 SLC39A2Q9NP94 309 aa16.42■□□□□ 0.22
CNOT3-201ENST00000221232 AGPAT5Q9NUQ2 364 aa16.42■□□□□ 0.22
CNOT3-201ENST00000221232 POTEDQ86YR6 584 aa16.42■□□□□ 0.22
CNOT3-201ENST00000221232 PYM1Q9BRP8 204 aaKnown RBP16.42■□□□□ 0.22
CNOT3-201ENST00000221232 LRRC4BQ9NT99 713 aa16.42■□□□□ 0.22
CNOT3-201ENST00000221232 SEC63Q9UGP8 760 aaKnown RBP16.42■□□□□ 0.22
CNOT3-201ENST00000221232 USP21Q9UK80 565 aa16.42■□□□□ 0.22
CNOT3-201ENST00000221232 PSMA7O14818 248 aa16.41■□□□□ 0.22
CNOT3-201ENST00000221232 GTF2IP78347 998 aa16.41■□□□□ 0.22
CNOT3-201ENST00000221232 SPAG1Q07617 926 aa16.41■□□□□ 0.22
CNOT3-201ENST00000221232 NONOQ15233 471 aaKnown RBP eCLIP16.41■□□□□ 0.222e-6■■■■□ 24
CNOT3-201ENST00000221232 ANKRD40Q6AI12 368 aa16.41■□□□□ 0.22
CNOT3-201ENST00000221232 NCAPH2Q6IBW4 605 aa16.41■□□□□ 0.22
CNOT3-201ENST00000221232 RRP36Q96EU6 259 aaKnown RBP16.41■□□□□ 0.22
CNOT3-201ENST00000221232 HDAC6Q9UBN7 1215 aa16.41■□□□□ 0.22
CNOT3-201ENST00000221232 LUC7L2Q9Y383 392 aaKnown RBP16.41■□□□□ 0.22
CNOT3-201ENST00000221232 PDS5AQ29RF7 1337 aaKnown RBP16.41■□□□□ 0.22
CNOT3-201ENST00000221232 TBC1D8O95759 1140 aa16.41■□□□□ 0.22
CNOT3-201ENST00000221232 OR52Z1P0C646 297 aa16.41■□□□□ 0.22
CNOT3-201ENST00000221232 SUGCTQ9HAC7 445 aa16.41■□□□□ 0.22
CNOT3-201ENST00000221232 ARFGAP3Q9NP61 516 aa16.41■□□□□ 0.22
CNOT3-201ENST00000221232 POLLQ9UGP5 575 aa16.41■□□□□ 0.22
CNOT3-201ENST00000221232 CDC23Q9UJX2 597 aa16.41■□□□□ 0.22
CNOT3-201ENST00000221232 EPN1Q9Y6I3 576 aaPredicted RBP16.41■□□□□ 0.22
CNOT3-201ENST00000221232 A0A1B0GUL6 1792 aa16.41■□□□□ 0.22
CNOT3-201ENST00000221232 ARHGAP25P42331 645 aa16.4■□□□□ 0.22
CNOT3-201ENST00000221232 STIM1Q13586 685 aa16.4■□□□□ 0.22
CNOT3-201ENST00000221232 VPS72Q15906 364 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms