RNA–Protein interactions for RNA: ENST00000638139.1

SMARCA2-265, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 2,675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-265ENST00000638139 CCDC87Q9NVE4 849 aa11.33□□□□□ -0.6
SMARCA2-265ENST00000638139 GNL3LQ9NVN8 582 aaKnown RBP11.33□□□□□ -0.6
SMARCA2-265ENST00000638139 GUCA1BQ9UMX6 200 aa11.33□□□□□ -0.6
SMARCA2-265ENST00000638139 H7C1D1 291 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 LONP1P36776 959 aaKnown RBP11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 FAM47AQ5JRC9 791 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 ADSSL1Q8N142 457 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 MB21D1Q8N884 522 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 NIP7Q9Y221 180 aaKnown RBP eCLIP11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 FAN1Q9Y2M0 1017 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 ORC4O43929 436 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 STAT6P42226 847 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 ARL6IP4Q66PJ3 421 aaKnown RBP11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 TRAPPC11Q7Z392 1133 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 OR8K1Q8NGG5 319 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 DOT1LQ8TEK3 1739 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 LAMB1P07942 1786 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 SCN7AQ01118 1682 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 LGALS16A8MUM7 142 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 TUBBP07437 444 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 ACTN2P35609 894 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 CRKLP46109 303 aaKnown RBP11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 PMS1P54277 932 aaKnown RBP11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 HSPA2P54652 639 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 HERVK_113P62684 666 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 ZNF507Q8TCN5 953 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 DNAJC7Q99615 494 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 HDAC6Q9UBN7 1215 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 TFR2Q9UP52 801 aa11.32□□□□□ -0.6
SMARCA2-265ENST00000638139 MYH14Q7Z406 1995 aaKnown RBP11.31□□□□□ -0.6
SMARCA2-265ENST00000638139 RREB1Q92766 1687 aa11.31□□□□□ -0.6
SMARCA2-265ENST00000638139 LRRIQ3A6PVS8 624 aaPredicted RBP11.31□□□□□ -0.6
SMARCA2-265ENST00000638139 EXOC5O00471 708 aa11.31□□□□□ -0.6
SMARCA2-265ENST00000638139 PSMD14O00487 310 aa11.31□□□□□ -0.6
SMARCA2-265ENST00000638139 WDR93Q6P2C0 686 aa11.31□□□□□ -0.6
SMARCA2-265ENST00000638139 WDR59Q6PJI9 974 aa11.31□□□□□ -0.6
SMARCA2-265ENST00000638139 DISC1Q9NRI5 854 aa11.31□□□□□ -0.6
SMARCA2-265ENST00000638139 FEZ2Q9UHY8 353 aaPredicted RBP11.31□□□□□ -0.6
SMARCA2-265ENST00000638139 LUC7L2Q9Y383 392 aaKnown RBP11.31□□□□□ -0.6
SMARCA2-265ENST00000638139 FAM205AQ6ZU69 1335 aa11.31□□□□□ -0.6
SMARCA2-265ENST00000638139 A0A1W2PQC6 194 aa11.31□□□□□ -0.6
SMARCA2-265ENST00000638139 ENC1O14682 589 aa11.31□□□□□ -0.6
SMARCA2-265ENST00000638139 UBE4AQ14139 1066 aa11.31□□□□□ -0.6
SMARCA2-265ENST00000638139 NAALADL2Q58DX5 795 aa11.31□□□□□ -0.6
SMARCA2-265ENST00000638139 BLIDQ8IZY5 108 aa11.31□□□□□ -0.6
SMARCA2-265ENST00000638139 CCDC148Q8NFR7 591 aa11.31□□□□□ -0.6
SMARCA2-265ENST00000638139 HAUS4Q9H6D7 363 aa11.31□□□□□ -0.6
SMARCA2-265ENST00000638139 CAPN11Q9UMQ6 739 aa11.31□□□□□ -0.6
SMARCA2-265ENST00000638139 PDS5AQ29RF7 1337 aaKnown RBP11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 ATP1A1P05023 1023 aaKnown RBP11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 CYP2D6P10635 497 aa11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 EEF1GP26641 437 aaKnown RBP11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 USP14P54578 494 aa11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 CAVIN4Q5BKX8 364 aa11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 C3orf67Q6ZVT6 689 aa11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 CCDC102AQ96A19 550 aa11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 FAM84BQ96KN1 310 aaPredicted RBP11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 CWC15Q9P013 229 aaKnown RBP11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 MYH1P12882 1939 aa11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 CASZ1Q86V15 1759 aa11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 PP2D1A8MPX8 630 aa11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 TULP1O00294 542 aaPredicted RBP11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 KLRC4O43908 158 aa11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 CALML3P27482 149 aa11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 RCSD1Q6JBY9 416 aa11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 ANKRD18AQ8IVF6 992 aa11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 FAM71BQ8TC56 605 aa11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 RASGRP4Q8TDF6 673 aa11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 GPKOWQ92917 476 aaPredicted RBP eCLIP11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 NSUN4Q96CB9 384 aaKnown RBP11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 MMS19Q96T76 1030 aa11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 THAP9Q9H5L6 903 aa11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 DCP1AQ9NPI6 582 aaPredicted RBP11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 LCMT1Q9UIC8 334 aa11.3□□□□□ -0.6
SMARCA2-265ENST00000638139 PES1O00541 588 aaKnown RBP11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 ATP6V1AP38606 617 aa11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 KCNB1Q14721 858 aa11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 CCDC122Q5T0U0 273 aa11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 TSPYL1Q9H0U9 437 aa11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 PCDHA4Q9UN74 947 aa11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 KIAA1551Q9HCM1 1747 aa11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 SRGAP2O75044 1071 aa11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 PHACTR2O75167 634 aa11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 GTF2E1P29083 439 aaPredicted RBP11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 MECOMQ03112 1051 aa11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 SLC20A2Q08357 652 aa11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 TSR1Q2NL82 804 aaKnown RBP11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 HSP90B2PQ58FF3 399 aa11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 PAPD7Q5XG87 772 aaKnown RBP11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 DTHD1Q6ZMT9 781 aa11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 LEKR1Q6ZMV7 388 aa11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 HOMEZQ8IX15 550 aa11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 TRIM47Q96LD4 638 aa11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 PLIN2Q99541 437 aa11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 TMEM60Q9H2L4 133 aa11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 RNF216Q9NWF9 866 aaPredicted RBP11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 SAR1BQ9Y6B6 198 aa11.29□□□□□ -0.6
SMARCA2-265ENST00000638139 KIF5BP33176 963 aa11.28□□□□□ -0.6
SMARCA2-265ENST00000638139 ITPK1Q13572 414 aa11.28□□□□□ -0.6
SMARCA2-265ENST00000638139 MEA1Q16626 185 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms