RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 NFXL1Q6ZNB6 911 aa11.5□□□□□ -0.57
SOX2-OT-249ENST00000628810 RASGRP2Q7LDG7 609 aa11.5□□□□□ -0.57
SOX2-OT-249ENST00000628810 ANKRD23Q86SG2 305 aa11.5□□□□□ -0.57
SOX2-OT-249ENST00000628810 ZNF274Q96GC6 653 aaPredicted RBP11.5□□□□□ -0.57
SOX2-OT-249ENST00000628810 HPS5Q9UPZ3 1129 aa11.5□□□□□ -0.57
SOX2-OT-249ENST00000628810 MYPNQ86TC9 1320 aa11.5□□□□□ -0.57
SOX2-OT-249ENST00000628810 WDR33Q9C0J8 1336 aaKnown RBP11.5□□□□□ -0.57
SOX2-OT-249ENST00000628810 RLFQ13129 1914 aa11.5□□□□□ -0.57
SOX2-OT-249ENST00000628810 PALM3A6NDB9 673 aaPredicted RBP11.49□□□□□ -0.57
SOX2-OT-249ENST00000628810 GOLGA8BA8MQT2 603 aa11.49□□□□□ -0.57
SOX2-OT-249ENST00000628810 ZBTB43O43298 467 aa11.49□□□□□ -0.57
SOX2-OT-249ENST00000628810 BMP3P12645 472 aa11.49□□□□□ -0.57
SOX2-OT-249ENST00000628810 PDIA3P30101 505 aaKnown RBP11.49□□□□□ -0.57
SOX2-OT-249ENST00000628810 MAP2K2P36507 400 aa11.49□□□□□ -0.57
SOX2-OT-249ENST00000628810 SLC1A4P43007 532 aa11.49□□□□□ -0.57
SOX2-OT-249ENST00000628810 TM4SF4P48230 202 aa11.49□□□□□ -0.57
SOX2-OT-249ENST00000628810 VEGFBP49765 207 aa11.49□□□□□ -0.57
SOX2-OT-249ENST00000628810 HTRA3P83110 453 aa11.49□□□□□ -0.57
SOX2-OT-249ENST00000628810 PPP2R5BQ15173 497 aa11.49□□□□□ -0.57
SOX2-OT-249ENST00000628810 BTNL9Q6UXG8 535 aa11.49□□□□□ -0.57
SOX2-OT-249ENST00000628810 SPICE1Q8N0Z3 855 aa11.49□□□□□ -0.57
SOX2-OT-249ENST00000628810 PTPN18Q99952 460 aa11.49□□□□□ -0.57
SOX2-OT-249ENST00000628810 RPAP3Q9H6T3 665 aaPredicted RBP11.49□□□□□ -0.57
SOX2-OT-249ENST00000628810 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.49□□□□□ -0.57
SOX2-OT-249ENST00000628810 MAD2L2Q9UI95 211 aa11.49□□□□□ -0.57
SOX2-OT-249ENST00000628810 TPCN1Q9ULQ1 816 aa11.49□□□□□ -0.57
SOX2-OT-249ENST00000628810 USP17L15C9J2P7 530 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 BTBD19C9JJ37 291 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 USP17L13C9JLJ4 530 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 USP17L11C9JVI0 530 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 USP17L18D6R9N7 530 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 USP17L22D6RA61 530 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 USP17L17D6RBQ6 530 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 USP17L19D6RCP7 530 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 USP17L20D6RJB6 530 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 PFKFB2O60825 505 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 CD2BP2O95400 341 aaKnown RBP11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 PARP1P09874 1014 aaKnown RBP11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 KIF5BP33176 963 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 STAT2P52630 851 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 KIF23Q02241 960 aaPredicted RBP11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 USP17L24Q0WX57 530 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 PABPC4Q13310 644 aaKnown RBP eCLIP11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 FAM83BQ5T0W9 1011 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 TMEM92Q6UXU6 159 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 LBX2Q6XYB7 198 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 SYNE3Q6ZMZ3 975 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 GADL1Q6ZQY3 521 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 CATSPERGQ6ZRH7 1159 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 MICU3Q86XE3 530 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 SNX21Q969T3 373 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 ZIC5Q96T25 663 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 NUP88Q99567 741 aaPredicted RBP11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 MYL10Q9BUA6 226 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 FAM217BQ9NTX9 383 aaPredicted RBP11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 RBM28Q9NW13 759 aaKnown RBP11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 LIMCH1Q9UPQ0 1083 aa11.48□□□□□ -0.57
SOX2-OT-249ENST00000628810 GOLGA8AA7E2F4 631 aa11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 IGF2BP3O00425 579 aaKnown RBP eCLIP11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 AOC2O75106 756 aa11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 HOXB1P14653 301 aaPredicted RBP11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 RXRAP19793 462 aa11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 SMARCA1P28370 1054 aa11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 METAP2P50579 478 aaKnown RBP eCLIP11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 ME3Q16798 604 aa11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 CCDC96Q2M329 555 aa11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 PAXIP1Q6ZW49 1069 aaPredicted RBP11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 TMTC3Q6ZXV5 915 aa11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 KCTD1Q719H9 257 aa11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 FAM160B2Q86V87 743 aa11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 FAM43AQ8N2R8 423 aa11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 FANCBQ8NB91 859 aa11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 CTCFLQ8NI51 663 aaPredicted RBP11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 ZSCAN31Q96LW9 406 aaPredicted RBP11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 LZTS2Q9BRK4 669 aa11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 FEM1BQ9UK73 627 aa11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 PNMA3Q9UL41 463 aa11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 ADAMTS5Q9UNA0 930 aa11.47□□□□□ -0.57
SOX2-OT-249ENST00000628810 FRMPD2Q68DX3 1309 aaPredicted RBP11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 ADGRA2Q96PE1 1338 aa11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 CCDC196A0A1B0GTZ2 297 aa11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 TMEM232C9JQI7 657 aa11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 PDHXO00330 501 aa11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 RAD21O60216 631 aa11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 LARGE1O95461 756 aa11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 CDC27P30260 824 aa11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 GNAQP50148 359 aa11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 FUT2Q10981 343 aa11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 RTN1Q16799 776 aa11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 SLC35G1Q2M3R5 365 aa11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 STAG2Q8N3U4 1231 aa11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 NUP133Q8WUM0 1156 aa11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 GTF3C6Q969F1 213 aa11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 SLF1Q9BQI6 1058 aa11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 LARP6Q9BRS8 491 aaKnown RBP11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 SPZ1Q9BXG8 430 aa11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 CFHR5Q9BXR6 569 aa11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 TANGO6Q9C0B7 1094 aa11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 ASCC2Q9H1I8 757 aaPredicted RBP11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 SH2B1Q9NRF2 756 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms