RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 K7ENM7 598 aa14.11□□□□□ -0.15
SCN8A-209ENST00000627620 ZBTB8OSQ8IWT0 167 aa14.11□□□□□ -0.15
SCN8A-209ENST00000627620 ZWINTO95229 277 aa14.11□□□□□ -0.15
SCN8A-209ENST00000627620 PPP2R5CQ13362 524 aa14.11□□□□□ -0.15
SCN8A-209ENST00000627620 ZNF827Q17R98 1081 aa14.11□□□□□ -0.15
SCN8A-209ENST00000627620 USPL1Q5W0Q7 1092 aa14.11□□□□□ -0.15
SCN8A-209ENST00000627620 VSIG1Q86XK7 387 aa14.11□□□□□ -0.15
SCN8A-209ENST00000627620 MYRIPQ8NFW9 859 aa14.11□□□□□ -0.15
SCN8A-209ENST00000627620 RAB17Q9H0T7 212 aa14.11□□□□□ -0.15
SCN8A-209ENST00000627620 FEZ2Q9UHY8 353 aaPredicted RBP14.11□□□□□ -0.15
SCN8A-209ENST00000627620 PHKA1P46020 1223 aa14.11□□□□□ -0.15
SCN8A-209ENST00000627620 GOLGA5Q8TBA6 731 aa14.11□□□□□ -0.15
SCN8A-209ENST00000627620 RSRC1Q96IZ7 334 aaKnown RBP14.11□□□□□ -0.15
SCN8A-209ENST00000627620 SLC5A4Q9NY91 659 aa14.11□□□□□ -0.15
SCN8A-209ENST00000627620 DDX41Q9UJV9 622 aaKnown RBP14.11□□□□□ -0.15
SCN8A-209ENST00000627620 I3L4J1 428 aa14.11□□□□□ -0.15
SCN8A-209ENST00000627620 UBE3CQ15386 1083 aa14.11□□□□□ -0.15
SCN8A-209ENST00000627620 DCAF15Q66K64 600 aa14.11□□□□□ -0.15
SCN8A-209ENST00000627620 TRIM58Q8NG06 486 aa14.11□□□□□ -0.15
SCN8A-209ENST00000627620 CLIC6Q96NY7 704 aa14.11□□□□□ -0.15
SCN8A-209ENST00000627620 PLCB1Q9NQ66 1216 aa14.11□□□□□ -0.15
SCN8A-209ENST00000627620 THRAP3Q9Y2W1 955 aaKnown RBP14.11□□□□□ -0.15
SCN8A-209ENST00000627620 PDE8BO95263 885 aa14.1□□□□□ -0.15
SCN8A-209ENST00000627620 BSPRYQ5W0U4 402 aa14.1□□□□□ -0.15
SCN8A-209ENST00000627620 SLFN13Q68D06 897 aa14.1□□□□□ -0.15
SCN8A-209ENST00000627620 MCF2L2Q86YR7 1114 aa14.1□□□□□ -0.15
SCN8A-209ENST00000627620 TEKT3Q9BXF9 490 aa14.1□□□□□ -0.15
SCN8A-209ENST00000627620 PCDHA7Q9UN72 937 aa14.1□□□□□ -0.15
SCN8A-209ENST00000627620 ZNF804BA4D1E1 1349 aa14.1□□□□□ -0.15
SCN8A-209ENST00000627620 GTPBP6O43824 516 aaPredicted RBP14.1□□□□□ -0.15
SCN8A-209ENST00000627620 PDIA3P30101 505 aaKnown RBP14.1□□□□□ -0.15
SCN8A-209ENST00000627620 DENND2CQ68D51 928 aa14.1□□□□□ -0.15
SCN8A-209ENST00000627620 GBP6Q6ZN66 633 aa14.1□□□□□ -0.15
SCN8A-209ENST00000627620 PLA2G4DQ86XP0 818 aa14.1□□□□□ -0.15
SCN8A-209ENST00000627620 FAM178BQ8IXR5 827 aa14.1□□□□□ -0.15
SCN8A-209ENST00000627620 PARP2Q9UGN5 583 aa14.1□□□□□ -0.15
SCN8A-209ENST00000627620 TMEM232C9JQI7 657 aa14.1□□□□□ -0.15
SCN8A-209ENST00000627620 PPFIA1Q13136 1202 aa14.1□□□□□ -0.15
SCN8A-209ENST00000627620 MCUR1Q96AQ8 359 aa14.1□□□□□ -0.15
SCN8A-209ENST00000627620 RRAGDQ9NQL2 400 aaPredicted RBP14.1□□□□□ -0.15
SCN8A-209ENST00000627620 KRT71Q3SY84 523 aa14.1□□□□□ -0.15
SCN8A-209ENST00000627620 SPOUT1Q5T280 376 aaKnown RBP14.1□□□□□ -0.15
SCN8A-209ENST00000627620 DESI2Q9BSY9 194 aa14.1□□□□□ -0.15
SCN8A-209ENST00000627620 PUS3Q9BZE2 481 aaKnown RBP14.1□□□□□ -0.15
SCN8A-209ENST00000627620 SPC25Q9HBM1 224 aa14.1□□□□□ -0.15
SCN8A-209ENST00000627620 HAUS2Q9NVX0 235 aa14.1□□□□□ -0.15
SCN8A-209ENST00000627620 CCDC62Q6P9F0 684 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 TRIML1Q8N9V2 468 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 RSAD2Q8WXG1 361 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 SLC39A2Q9NP94 309 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 COPRSQ9NQ92 184 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 LOC102724428A0A0B4J2F2 783 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 ADORA1P30542 326 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 SIK1P57059 783 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 FAM47CQ5HY64 1035 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 RPGRIP1Q96KN7 1286 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 GDAP1L1Q96MZ0 367 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 KCNK3O14649 394 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 SRGAP1Q7Z6B7 1085 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 ANKRD35Q8N283 1001 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 C1orf112Q9NSG2 853 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 RAB20Q9NX57 234 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 MYOM2P54296 1465 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 N4BP1O75113 896 aaKnown RBP14.09□□□□□ -0.15
SCN8A-209ENST00000627620 TNNC2P02585 160 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 RPN1P04843 607 aaKnown RBP14.09□□□□□ -0.15
SCN8A-209ENST00000627620 PTGDRQ13258 359 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 RNF169Q8NCN4 708 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 SYMPKQ92797 1274 aaKnown RBP14.09□□□□□ -0.15
SCN8A-209ENST00000627620 CABS1Q96KC9 395 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 ANO3Q9BYT9 981 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 AFG3L2Q9Y4W6 797 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 COL4A3BPQ9Y5P4 624 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 IFNB1P01574 187 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 INPP5BP32019 993 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 MED10Q9BTT4 135 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 BEGAINQ9BUH8 593 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 RASSF4Q9H2L5 321 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 SUGCTQ9HAC7 445 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 CLIC4Q9Y696 253 aa14.09□□□□□ -0.15
SCN8A-209ENST00000627620 MAN1A1P33908 653 aa14.08□□□□□ -0.15
SCN8A-209ENST00000627620 CRKLP46109 303 aaKnown RBP14.08□□□□□ -0.15
SCN8A-209ENST00000627620 SCRN1Q12765 414 aa14.08□□□□□ -0.15
SCN8A-209ENST00000627620 SCYL2Q6P3W7 929 aa14.08□□□□□ -0.15
SCN8A-209ENST00000627620 GADL1Q6ZQY3 521 aa14.08□□□□□ -0.15
SCN8A-209ENST00000627620 CACNA2D3Q8IZS8 1091 aa14.08□□□□□ -0.15
SCN8A-209ENST00000627620 ARHGEF2Q92974 986 aaKnown RBP14.08□□□□□ -0.15
SCN8A-209ENST00000627620 POLR2FP61218 127 aaKnown RBP14.08□□□□□ -0.16
SCN8A-209ENST00000627620 ADAM9Q13443 819 aa14.08□□□□□ -0.16
SCN8A-209ENST00000627620 POLA2Q14181 598 aa14.08□□□□□ -0.16
SCN8A-209ENST00000627620 KRT81Q14533 505 aa14.08□□□□□ -0.16
SCN8A-209ENST00000627620 WHAMMP3Q1A5X7 153 aa14.08□□□□□ -0.16
SCN8A-209ENST00000627620 MMS19Q96T76 1030 aa14.08□□□□□ -0.16
SCN8A-209ENST00000627620 FANCLQ9NW38 375 aa14.08□□□□□ -0.16
SCN8A-209ENST00000627620 PCDHA1Q9Y5I3 950 aa14.08□□□□□ -0.16
SCN8A-209ENST00000627620 TACC3Q9Y6A5 838 aa14.08□□□□□ -0.16
SCN8A-209ENST00000627620 H0YCG3 227 aa14.08□□□□□ -0.16
SCN8A-209ENST00000627620 BUB1O43683 1085 aa14.08□□□□□ -0.16
SCN8A-209ENST00000627620 PCP11498 1178 aaKnown RBP14.08□□□□□ -0.16
SCN8A-209ENST00000627620 NDUFA8P51970 172 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms