RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 RAB15P59190 212 aa7.73□□□□□ -1.17
TCF4-249ENST00000625716 DYNLL1P63167 89 aaKnown RBP7.73□□□□□ -1.17
TCF4-249ENST00000625716 ARHGEF6Q15052 776 aa7.73□□□□□ -1.17
TCF4-249ENST00000625716 PKN2Q16513 984 aaKnown RBP7.73□□□□□ -1.17
TCF4-249ENST00000625716 FOXP4Q8IVH2 680 aaPredicted RBP7.73□□□□□ -1.17
TCF4-249ENST00000625716 CCDC155Q8N6L0 562 aa7.73□□□□□ -1.17
TCF4-249ENST00000625716 MIGA1Q8NAN2 632 aa7.73□□□□□ -1.17
TCF4-249ENST00000625716 IL27Q8NEV9 243 aa7.73□□□□□ -1.17
TCF4-249ENST00000625716 BRI3BPQ8WY22 251 aa7.73□□□□□ -1.17
TCF4-249ENST00000625716 ERO1AQ96HE7 468 aa7.73□□□□□ -1.17
TCF4-249ENST00000625716 PTPN18Q99952 460 aa7.73□□□□□ -1.17
TCF4-249ENST00000625716 BOLA2Q9H3K6 86 aa7.73□□□□□ -1.17
TCF4-249ENST00000625716 DCTPP1Q9H773 170 aa7.73□□□□□ -1.17
TCF4-249ENST00000625716 PAG1Q9NWQ8 432 aa7.73□□□□□ -1.17
TCF4-249ENST00000625716 HERC5Q9UII4 1024 aaKnown RBP7.73□□□□□ -1.17
TCF4-249ENST00000625716 ZHX2Q9Y6X8 837 aa7.73□□□□□ -1.17
TCF4-249ENST00000625716 AKAP11Q9UKA4 1901 aa7.73□□□□□ -1.17
TCF4-249ENST00000625716 MYH2Q9UKX2 1941 aa7.73□□□□□ -1.17
TCF4-249ENST00000625716 RFX7Q2KHR2 1363 aa7.72□□□□□ -1.17
TCF4-249ENST00000625716 PHF20L1A8MW92 1017 aa7.72□□□□□ -1.17
TCF4-249ENST00000625716 PDE6AP16499 860 aa7.72□□□□□ -1.17
TCF4-249ENST00000625716 PTPRAP18433 802 aa7.72□□□□□ -1.17
TCF4-249ENST00000625716 SP3Q02447 781 aa7.72□□□□□ -1.17
TCF4-249ENST00000625716 MAP3K10Q02779 954 aa7.72□□□□□ -1.17
TCF4-249ENST00000625716 CRHR2Q13324 411 aa7.72□□□□□ -1.17
TCF4-249ENST00000625716 AAMPQ13685 434 aa7.72□□□□□ -1.17
TCF4-249ENST00000625716 KIF22Q14807 665 aa7.72□□□□□ -1.17
TCF4-249ENST00000625716 ZSCAN25Q6NSZ9 544 aa7.72□□□□□ -1.17
TCF4-249ENST00000625716 FASTKD5Q7L8L6 764 aaKnown RBP7.72□□□□□ -1.17
TCF4-249ENST00000625716 ADGRA1Q86SQ6 560 aa7.72□□□□□ -1.17
TCF4-249ENST00000625716 CRBNQ96SW2 442 aa7.72□□□□□ -1.17
TCF4-249ENST00000625716 CRNKL1Q9BZJ0 848 aaKnown RBP7.72□□□□□ -1.17
TCF4-249ENST00000625716 R3HDMLQ9H3Y0 253 aa7.72□□□□□ -1.17
TCF4-249ENST00000625716 AS3MTQ9HBK9 375 aa7.72□□□□□ -1.17
TCF4-249ENST00000625716 ZCCHC17Q9NP64 241 aaKnown RBP7.72□□□□□ -1.17
TCF4-249ENST00000625716 ECHDC1Q9NTX5 307 aa7.72□□□□□ -1.17
TCF4-249ENST00000625716 SAP30BPQ9UHR5 308 aaKnown RBP7.72□□□□□ -1.17
TCF4-249ENST00000625716 FLT1P17948 1338 aa7.72□□□□□ -1.17
TCF4-249ENST00000625716 AK9Q5TCS8 1911 aa7.72□□□□□ -1.17
TCF4-249ENST00000625716 ATRNL1Q5VV63 1379 aa7.71□□□□□ -1.17
TCF4-249ENST00000625716 COL2A1P02458 1487 aaPredicted RBP7.71□□□□□ -1.18
TCF4-249ENST00000625716 FAM181BA6NEQ2 426 aa7.71□□□□□ -1.18
TCF4-249ENST00000625716 TRIM75PA6NK02 468 aa7.71□□□□□ -1.18
TCF4-249ENST00000625716 FAM196BA6NMK8 535 aa7.71□□□□□ -1.18
TCF4-249ENST00000625716 BTBD19C9JJ37 291 aa7.71□□□□□ -1.18
TCF4-249ENST00000625716 PDHXO00330 501 aa7.71□□□□□ -1.18
TCF4-249ENST00000625716 POLR3DP05423 398 aaPredicted RBP7.71□□□□□ -1.18
TCF4-249ENST00000625716 NBPF20Q3BBV1 942 aa7.71□□□□□ -1.18
TCF4-249ENST00000625716 TMEM259Q4ZIN3 620 aa7.71□□□□□ -1.18
TCF4-249ENST00000625716 GADL1Q6ZQY3 521 aa7.71□□□□□ -1.18
TCF4-249ENST00000625716 ANKRD23Q86SG2 305 aa7.71□□□□□ -1.18
TCF4-249ENST00000625716 TTC6Q86TZ1 520 aa7.71□□□□□ -1.18
TCF4-249ENST00000625716 AMOTL1Q8IY63 956 aa7.71□□□□□ -1.18
TCF4-249ENST00000625716 FAM43AQ8N2R8 423 aa7.71□□□□□ -1.18
TCF4-249ENST00000625716 RNF217Q8TC41 542 aa7.71□□□□□ -1.18
TCF4-249ENST00000625716 NANOS1Q8WY41 292 aaKnown RBP7.71□□□□□ -1.18
TCF4-249ENST00000625716 PCMTD1Q96MG8 357 aaPredicted RBP7.71□□□□□ -1.18
TCF4-249ENST00000625716 HAUS7Q99871 368 aa7.71□□□□□ -1.18
TCF4-249ENST00000625716 PALD1Q9ULE6 856 aa7.71□□□□□ -1.18
TCF4-249ENST00000625716 KCNH4Q9UQ05 1017 aa7.71□□□□□ -1.18
TCF4-249ENST00000625716 TRIM17Q9Y577 477 aa7.71□□□□□ -1.18
TCF4-249ENST00000625716 ZNF532Q9HCE3 1301 aa7.71□□□□□ -1.18
TCF4-249ENST00000625716 USP17L5A8MUK1 530 aa7.7□□□□□ -1.18
TCF4-249ENST00000625716 ERC2O15083 957 aa7.7□□□□□ -1.18
TCF4-249ENST00000625716 TLR2O60603 784 aa7.7□□□□□ -1.18
TCF4-249ENST00000625716 CAP2P40123 477 aa7.7□□□□□ -1.18
TCF4-249ENST00000625716 SLC4A8Q2Y0W8 1093 aa7.7□□□□□ -1.18
TCF4-249ENST00000625716 LRRFIP1Q32MZ4 808 aaKnown RBP7.7□□□□□ -1.18
TCF4-249ENST00000625716 RNFT1Q5M7Z0 435 aa7.7□□□□□ -1.18
TCF4-249ENST00000625716 FOXD4L5Q5VV16 416 aaPredicted RBP7.7□□□□□ -1.18
TCF4-249ENST00000625716 CD99L2Q8TCZ2 262 aa7.7□□□□□ -1.18
TCF4-249ENST00000625716 RWDD1Q9H446 243 aaPredicted RBP7.7□□□□□ -1.18
TCF4-249ENST00000625716 EFCC1Q9HA90 598 aa7.7□□□□□ -1.18
TCF4-249ENST00000625716 AFG3L2Q9Y4W6 797 aa7.7□□□□□ -1.18
TCF4-249ENST00000625716 OTOFQ9HC10 1997 aa7.7□□□□□ -1.18
TCF4-249ENST00000625716 MAST2Q6P0Q8 1798 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 A0A0G2JLL6 359 aaPredicted RBP7.69□□□□□ -1.18
TCF4-249ENST00000625716 GPR37L1O60883 481 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 ADH1AP07327 375 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 ASNSP08243 561 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 SLURP2P0DP57 97 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 ADD2P35612 726 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 PTGIRP43119 386 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 SPP2Q13103 211 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 PABPC4Q13310 644 aaKnown RBP eCLIP7.69□□□□□ -1.18
TCF4-249ENST00000625716 UBE3CQ15386 1083 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 ANKRD45Q5TZF3 282 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 FBXO46Q6PJ61 603 aaPredicted RBP7.69□□□□□ -1.18
TCF4-249ENST00000625716 PRRT2Q7Z6L0 340 aaPredicted RBP7.69□□□□□ -1.18
TCF4-249ENST00000625716 ZNF280CQ8ND82 737 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 PNMA1Q8ND90 353 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 GCC1Q96CN9 775 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 EDC3Q96F86 508 aaKnown RBP7.69□□□□□ -1.18
TCF4-249ENST00000625716 CNTNAP3BQ96NU0 1288 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 PARK7Q99497 189 aaKnown RBP7.69□□□□□ -1.18
TCF4-249ENST00000625716 RIOK1Q9BRS2 568 aaKnown RBP7.69□□□□□ -1.18
TCF4-249ENST00000625716 CNTNAP3Q9BZ76 1288 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 ARMT1Q9H993 441 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 CABP5Q9NP86 173 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 GINM1Q9NU53 330 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms