RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 PHKA1P46020 1223 aa19.53■□□□□ 0.72
ATXN2-227ENST00000616825 GTF2A1P52655 376 aaPredicted RBP19.53■□□□□ 0.72
ATXN2-227ENST00000616825 PABPC4Q13310 644 aaKnown RBP eCLIP19.53■□□□□ 0.726e-7■■■■□ 22.6
ATXN2-227ENST00000616825 PPP2R5EQ16537 467 aa19.53■□□□□ 0.72
ATXN2-227ENST00000616825 DOK7Q18PE1 504 aa19.53■□□□□ 0.72
ATXN2-227ENST00000616825 WDR62O43379 1518 aa19.53■□□□□ 0.72
ATXN2-227ENST00000616825 NOL3O60936 208 aaKnown RBP19.53■□□□□ 0.72
ATXN2-227ENST00000616825 LIG4P49917 911 aa19.53■□□□□ 0.72
ATXN2-227ENST00000616825 GOLGA8HP0CJ92 632 aa19.52■□□□□ 0.72
ATXN2-227ENST00000616825 GBP6Q6ZN66 633 aa19.52■□□□□ 0.72
ATXN2-227ENST00000616825 KRT26Q7Z3Y9 468 aa19.52■□□□□ 0.72
ATXN2-227ENST00000616825 GREM2Q9H772 168 aa19.52■□□□□ 0.72
ATXN2-227ENST00000616825 ZNF804BA4D1E1 1349 aa19.52■□□□□ 0.72
ATXN2-227ENST00000616825 DDAH1O94760 285 aa19.52■□□□□ 0.72
ATXN2-227ENST00000616825 ABCB4P21439 1286 aa19.52■□□□□ 0.72
ATXN2-227ENST00000616825 FAM102BQ5T8I3 360 aa19.52■□□□□ 0.72
ATXN2-227ENST00000616825 C10orf67Q8IYJ2 551 aa19.52■□□□□ 0.72
ATXN2-227ENST00000616825 LSM14BQ9BX40 385 aaKnown RBP19.52■□□□□ 0.72
ATXN2-227ENST00000616825 AFG3L2Q9Y4W6 797 aa19.52■□□□□ 0.72
ATXN2-227ENST00000616825 GTPBP6O43824 516 aaPredicted RBP19.52■□□□□ 0.72
ATXN2-227ENST00000616825 NR1I2O75469 434 aa19.52■□□□□ 0.72
ATXN2-227ENST00000616825 TTC31Q49AM3 519 aaPredicted RBP19.52■□□□□ 0.72
ATXN2-227ENST00000616825 FRMPD2Q68DX3 1309 aaPredicted RBP19.52■□□□□ 0.71
ATXN2-227ENST00000616825 N4BP1O75113 896 aaKnown RBP19.52■□□□□ 0.71
ATXN2-227ENST00000616825 EAPPQ56P03 285 aaPredicted RBP19.52■□□□□ 0.71
ATXN2-227ENST00000616825 FAM47CQ5HY64 1035 aa19.52■□□□□ 0.71
ATXN2-227ENST00000616825 USPL1Q5W0Q7 1092 aa19.52■□□□□ 0.71
ATXN2-227ENST00000616825 PLA2G4DQ86XP0 818 aa19.52■□□□□ 0.71
ATXN2-227ENST00000616825 SEMA3EO15041 775 aa19.51■□□□□ 0.71
ATXN2-227ENST00000616825 IL6STP40189 918 aaPredicted RBP19.51■□□□□ 0.71
ATXN2-227ENST00000616825 PTGDRQ13258 359 aa19.51■□□□□ 0.71
ATXN2-227ENST00000616825 C1orf112Q9NSG2 853 aa19.51■□□□□ 0.71
ATXN2-227ENST00000616825 PARP2Q9UGN5 583 aa19.51■□□□□ 0.71
ATXN2-227ENST00000616825 SLC12A2P55011 1212 aa19.51■□□□□ 0.71
ATXN2-227ENST00000616825 RBM6P78332 1123 aaKnown RBP19.51■□□□□ 0.71
ATXN2-227ENST00000616825 MORC3Q14149 939 aa19.51■□□□□ 0.71
ATXN2-227ENST00000616825 KRBA2Q6ZNG9 492 aa19.51■□□□□ 0.71
ATXN2-227ENST00000616825 GPR108Q9NPR9 543 aa19.51■□□□□ 0.71
ATXN2-227ENST00000616825 TACC3Q9Y6A5 838 aa19.51■□□□□ 0.71
ATXN2-227ENST00000616825 TCP10L2B9ZVM9 353 aa19.51■□□□□ 0.71
ATXN2-227ENST00000616825 SUGCTQ9HAC7 445 aa19.51■□□□□ 0.71
ATXN2-227ENST00000616825 GABPAQ06546 454 aa19.51■□□□□ 0.71
ATXN2-227ENST00000616825 LONRF2Q1L5Z9 754 aa19.51■□□□□ 0.71
ATXN2-227ENST00000616825 GPATCH4Q5T3I0 446 aaKnown RBP19.51■□□□□ 0.71
ATXN2-227ENST00000616825 SRGAP1Q7Z6B7 1085 aa19.51■□□□□ 0.71
ATXN2-227ENST00000616825 GSDMBQ8TAX9 411 aa19.51■□□□□ 0.71
ATXN2-227ENST00000616825 ATP2A3Q93084 1043 aa19.51■□□□□ 0.71
ATXN2-227ENST00000616825 TMEM232C9JQI7 657 aa19.5■□□□□ 0.71
ATXN2-227ENST00000616825 H2AFZP0C0S5 128 aa19.5■□□□□ 0.71
ATXN2-227ENST00000616825 AOC3Q16853 763 aa19.5■□□□□ 0.71
ATXN2-227ENST00000616825 H2AFVQ71UI9 128 aa19.5■□□□□ 0.71
ATXN2-227ENST00000616825 MAP4K1Q92918 833 aa19.5■□□□□ 0.71
ATXN2-227ENST00000616825 PDIA3P30101 505 aaKnown RBP19.5■□□□□ 0.71
ATXN2-227ENST00000616825 ZNF827Q17R98 1081 aa19.5■□□□□ 0.71
ATXN2-227ENST00000616825 SULF1Q8IWU6 871 aa19.5■□□□□ 0.71
ATXN2-227ENST00000616825 CTAGE3PQ8IX95 158 aa19.5■□□□□ 0.71
ATXN2-227ENST00000616825 MYRIPQ8NFW9 859 aa19.5■□□□□ 0.71
ATXN2-227ENST00000616825 GPKOWQ92917 476 aaPredicted RBP eCLIP19.5■□□□□ 0.71
ATXN2-227ENST00000616825 MCUR1Q96AQ8 359 aa19.5■□□□□ 0.71
ATXN2-227ENST00000616825 AMNQ9BXJ7 453 aa19.5■□□□□ 0.71
ATXN2-227ENST00000616825 HESX1Q9UBX0 185 aa19.5■□□□□ 0.71
ATXN2-227ENST00000616825 STAP2Q9UGK3 403 aa19.5■□□□□ 0.71
ATXN2-227ENST00000616825 PCDHA7Q9UN72 937 aa19.5■□□□□ 0.71
ATXN2-227ENST00000616825 HAUS4Q9H6D7 363 aa19.5■□□□□ 0.71
ATXN2-227ENST00000616825 DBNLQ9UJU6 430 aaKnown RBP19.5■□□□□ 0.71
ATXN2-227ENST00000616825 LEMD3Q9Y2U8 911 aa19.5■□□□□ 0.71
ATXN2-227ENST00000616825 ANKRD20A3Q5VUR7 823 aa19.49■□□□□ 0.71
ATXN2-227ENST00000616825 RNF169Q8NCN4 708 aa19.49■□□□□ 0.71
ATXN2-227ENST00000616825 TEKT3Q9BXF9 490 aa19.49■□□□□ 0.71
ATXN2-227ENST00000616825 MIS12Q9H081 205 aa19.49■□□□□ 0.71
ATXN2-227ENST00000616825 CCDC127Q96BQ5 260 aa19.49■□□□□ 0.71
ATXN2-227ENST00000616825 DDX25Q9UHL0 483 aaKnown RBP19.49■□□□□ 0.71
ATXN2-227ENST00000616825 KIF21AQ7Z4S6 1674 aa19.49■□□□□ 0.71
ATXN2-227ENST00000616825 I3L4J1 428 aa19.49■□□□□ 0.71
ATXN2-227ENST00000616825 ABCB5Q2M3G0 1257 aa19.49■□□□□ 0.71
ATXN2-227ENST00000616825 SPATA1Q5VX52 437 aa19.49■□□□□ 0.71
ATXN2-227ENST00000616825 BSPRYQ5W0U4 402 aa19.49■□□□□ 0.71
ATXN2-227ENST00000616825 CCDC62Q6P9F0 684 aa19.49■□□□□ 0.71
ATXN2-227ENST00000616825 VPS37BQ9H9H4 285 aa19.49■□□□□ 0.71
ATXN2-227ENST00000616825 RIC8AQ9NPQ8 531 aa19.49■□□□□ 0.71
ATXN2-227ENST00000616825 PANK4Q9NVE7 773 aa19.49■□□□□ 0.71
ATXN2-227ENST00000616825 ASAP1Q9ULH1 1129 aa19.49■□□□□ 0.71
ATXN2-227ENST00000616825 LONP1P36776 959 aaKnown RBP19.49■□□□□ 0.71
ATXN2-227ENST00000616825 ATP11AP98196 1134 aa19.49■□□□□ 0.71
ATXN2-227ENST00000616825 GKAP1Q5VSY0 366 aaPredicted RBP19.49■□□□□ 0.71
ATXN2-227ENST00000616825 DENND2CQ68D51 928 aa19.49■□□□□ 0.71
ATXN2-227ENST00000616825 ARHGAP24Q8N264 748 aa19.49■□□□□ 0.71
ATXN2-227ENST00000616825 K7ENM7 598 aa19.48■□□□□ 0.71
ATXN2-227ENST00000616825 HGSO14964 777 aaPredicted RBP19.48■□□□□ 0.71
ATXN2-227ENST00000616825 TNNC2P02585 160 aa19.48■□□□□ 0.71
ATXN2-227ENST00000616825 ADAM9Q13443 819 aa19.48■□□□□ 0.71
ATXN2-227ENST00000616825 ARMCX5Q6P1M9 558 aa19.48■□□□□ 0.71
ATXN2-227ENST00000616825 RSRC1Q96IZ7 334 aaKnown RBP19.48■□□□□ 0.71
ATXN2-227ENST00000616825 FANCLQ9NW38 375 aa19.48■□□□□ 0.71
ATXN2-227ENST00000616825 ATP7AQ04656 1500 aa19.48■□□□□ 0.71
ATXN2-227ENST00000616825 TMOD1P28289 359 aa19.48■□□□□ 0.71
ATXN2-227ENST00000616825 POLR2BP30876 1174 aaKnown RBP19.48■□□□□ 0.71
ATXN2-227ENST00000616825 ETF1P62495 437 aaKnown RBP19.48■□□□□ 0.71
ATXN2-227ENST00000616825 HADHQ16836 314 aaKnown RBP19.48■□□□□ 0.71
ATXN2-227ENST00000616825 CACNA2D3Q8IZS8 1091 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms