RNA–Protein interactions for RNA: ENST00000606426.1

CUX2P1-201, Transcript of cut like homeobox 2 pseudogene 1, humanhuman

BASIC

Gene CUX2P1, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2P1-201ENST00000606426 BRF1Q92994 677 aa8.73□□□□□ -1.01
CUX2P1-201ENST00000606426 KIFC2Q96AC6 838 aa8.73□□□□□ -1.01
CUX2P1-201ENST00000606426 CHMP4CQ96CF2 233 aa8.73□□□□□ -1.01
CUX2P1-201ENST00000606426 NUP88Q99567 741 aaPredicted RBP8.73□□□□□ -1.01
CUX2P1-201ENST00000606426 LRRC2Q9BYS8 371 aa8.73□□□□□ -1.01
CUX2P1-201ENST00000606426 CPA4Q9UI42 421 aa8.73□□□□□ -1.01
CUX2P1-201ENST00000606426 ADGRA2Q96PE1 1338 aa8.73□□□□□ -1.01
CUX2P1-201ENST00000606426 PTPRFP10586 1907 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 KLF18A0A0U1RQI7 1052 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 PALM3A6NDB9 673 aaPredicted RBP8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 KLRF2D3W0D1 207 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 ATP2A1O14983 1001 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 FOXN1O15353 648 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 ZBTB43O43298 467 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 HSPA8P11142 646 aaKnown RBP8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 MAPK4P31152 587 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 FCGRTP55899 365 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 EVCP57679 992 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 ERVK-9P63128 1117 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 ERVK-24P63145 666 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 RABEP1Q15276 862 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 SYDE2Q5VT97 1194 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 APOA5Q6Q788 366 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 FANCBQ8NB91 859 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 SHCBP1Q8NEM2 672 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 ATG4CQ96DT6 458 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 ZNF274Q96GC6 653 aaPredicted RBP8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 TCEANC2Q96MN5 208 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 TBC1D32Q96NH3 1257 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 TEX13BQ9BXU2 312 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 UPF3BQ9BZI7 483 aaKnown RBP8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 SLC38A10Q9HBR0 1119 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 PRDM10Q9NQV6 1147 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 RBPJLQ9UBG7 517 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 PRR12Q9ULL5 1215 aa8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 FRMPD2Q68DX3 1309 aaPredicted RBP8.72□□□□□ -1.01
CUX2P1-201ENST00000606426 DHX16O60231 1041 aaKnown RBP8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 ST18O60284 1047 aa8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 GOLGA8HP0CJ92 632 aa8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 CPA1P15085 419 aa8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 STAT3P40763 770 aa8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 MCM2P49736 904 aa8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 METAP2P50579 478 aaKnown RBP eCLIP8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 NEK4P51957 841 aa8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 PRMT2P55345 433 aa8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 LACTBP83111 547 aaPredicted RBP8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 RTN1Q16799 776 aa8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 TKFCQ3LXA3 575 aa8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 CPLX2Q6PUV4 134 aaKnown RBP8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 SAMD1Q6SPF0 538 aaPredicted RBP8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 MICU3Q86XE3 530 aa8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 ZNF296Q8WUU4 475 aaPredicted RBP8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 COA7Q96BR5 231 aa8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 PAGR1Q9BTK6 254 aa8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 MAF1Q9H063 256 aa8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 SPATC1LQ9H0A9 340 aa8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 RANBP17Q9H2T7 1088 aaKnown RBP8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 MROH8Q9H579 483 aa8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 SENP2Q9HC62 589 aa8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 CWC22Q9HCG8 908 aaKnown RBP8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 GPCPD1Q9NPB8 672 aa8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 FBXO28Q9NVF7 368 aa8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 RBM27Q9P2N5 1060 aaKnown RBP8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 FBXO40Q9UH90 709 aa8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 MAD2L2Q9UI95 211 aa8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 NAP1L2Q9ULW6 460 aaPredicted RBP8.71□□□□□ -1.02
CUX2P1-201ENST00000606426 MYH4Q9Y623 1939 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 GOLGA8AA7E2F4 631 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 GOLGA8BA8MQT2 603 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 STRNO43815 780 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 SLC16A2P36021 539 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 LBX1P52954 281 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 APOBRQ0VD83 1088 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 TOB2Q14106 344 aaPredicted RBP8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 PLS1Q14651 629 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 TMEM132BQ14DG7 1078 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 TTBK2Q6IQ55 1244 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 RIOX2Q8IUF8 465 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 ADGRF4Q8IZF3 695 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 CHST13Q8NET6 341 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 REPS2Q8NFH8 660 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 SOCS4Q8WXH5 440 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 SPZ1Q9BXG8 430 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 UBA5Q9GZZ9 404 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 R3HDMLQ9H3Y0 253 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 RIOX1Q9H6W3 641 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 TXNRD2Q9NNW7 524 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 GPHNQ9NQX3 736 aaPredicted RBP8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 BTBD7Q9P203 1132 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 SEC63Q9UGP8 760 aaKnown RBP8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 ZNF214Q9UL59 606 aaPredicted RBP8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 IVNS1ABPQ9Y6Y0 642 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 NID2Q14112 1375 aa8.7□□□□□ -1.02
CUX2P1-201ENST00000606426 TNPO2O14787 897 aaKnown RBP8.69□□□□□ -1.02
CUX2P1-201ENST00000606426 ZBTB5O15062 677 aa8.69□□□□□ -1.02
CUX2P1-201ENST00000606426 CNMDO75829 334 aa8.69□□□□□ -1.02
CUX2P1-201ENST00000606426 CDKL5O76039 1030 aa8.69□□□□□ -1.02
CUX2P1-201ENST00000606426 FMNL1O95466 1100 aaPredicted RBP8.69□□□□□ -1.02
CUX2P1-201ENST00000606426 ICAM1P05362 532 aa8.69□□□□□ -1.02
CUX2P1-201ENST00000606426 PDIA3P30101 505 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms