RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 JMJD4Q9H9V9 463 aa20■□□□□ 0.79
PPFIA3-207ENST00000602716 NMRK2Q9NPI5 230 aa20■□□□□ 0.79
PPFIA3-207ENST00000602716 USP17L10C9JJH3 530 aa19.99■□□□□ 0.79
PPFIA3-207ENST00000602716 ADGRF4Q8IZF3 695 aa19.99■□□□□ 0.79
PPFIA3-207ENST00000602716 HOOK2Q96ED9 719 aa19.99■□□□□ 0.79
PPFIA3-207ENST00000602716 LZTS2Q9BRK4 669 aa19.99■□□□□ 0.79
PPFIA3-207ENST00000602716 VCPKMTQ9H867 229 aa19.99■□□□□ 0.79
PPFIA3-207ENST00000602716 TRAF5O00463 557 aa19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 PPP1R11O60927 126 aaPredicted RBP19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 PTPRAP18433 802 aa19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 NR5A1Q13285 461 aa19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 TRIM29Q14134 588 aa19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 FAM83BQ5T0W9 1011 aa19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 GPATCH4Q5T3I0 446 aaKnown RBP19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 HEATR3Q7Z4Q2 680 aa19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 DIS3L2Q8IYB7 885 aaKnown RBP19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 PHF20Q9BVI0 1012 aa19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 BTBD18B2RXH4 712 aa19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 STXBP3O00186 592 aa19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 PDIA4P13667 645 aaKnown RBP19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 TAL1P17542 331 aaPredicted RBP19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 SNAP25P60880 206 aa19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 NOM1Q5C9Z4 860 aaKnown RBP19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 PNMA8AQ86V59 439 aaPredicted RBP19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 NAP1L5Q96NT1 182 aaPredicted RBP19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 FEZ1Q99689 392 aa19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 CLEC11AQ9Y240 323 aa19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 SNCAIPQ9Y6H5 919 aa19.98■□□□□ 0.79
PPFIA3-207ENST00000602716 FIBPO43427 364 aa19.97■□□□□ 0.79
PPFIA3-207ENST00000602716 BMP3P12645 472 aa19.97■□□□□ 0.79
PPFIA3-207ENST00000602716 MTMR2Q13614 643 aa19.97■□□□□ 0.79
PPFIA3-207ENST00000602716 VGLL4Q14135 290 aa19.97■□□□□ 0.79
PPFIA3-207ENST00000602716 CNKSR2Q8WXI2 1034 aa19.97■□□□□ 0.79
PPFIA3-207ENST00000602716 TFIP11Q9UBB9 837 aaKnown RBP19.97■□□□□ 0.79
PPFIA3-207ENST00000602716 SYCE3A1L190 88 aa19.97■□□□□ 0.79
PPFIA3-207ENST00000602716 FAM205CA6NFA0 338 aa19.97■□□□□ 0.79
PPFIA3-207ENST00000602716 TMEM232C9JQI7 657 aa19.97■□□□□ 0.79
PPFIA3-207ENST00000602716 ZSCAN30Q86W11 494 aa19.97■□□□□ 0.79
PPFIA3-207ENST00000602716 RRP36Q96EU6 259 aaKnown RBP19.97■□□□□ 0.79
PPFIA3-207ENST00000602716 PDLIM2Q96JY6 352 aa19.97■□□□□ 0.79
PPFIA3-207ENST00000602716 GOPCQ9HD26 462 aa19.97■□□□□ 0.79
PPFIA3-207ENST00000602716 SYNPO2Q9UMS6 1093 aa19.97■□□□□ 0.79
PPFIA3-207ENST00000602716 EARS2Q5JPH6 523 aaKnown RBP19.96■□□□□ 0.79
PPFIA3-207ENST00000602716 NOL9Q5SY16 702 aaKnown RBP19.96■□□□□ 0.79
PPFIA3-207ENST00000602716 ZSCAN16Q9H4T2 348 aaPredicted RBP19.96■□□□□ 0.79
PPFIA3-207ENST00000602716 SMARCA1P28370 1054 aa19.95■□□□□ 0.78
PPFIA3-207ENST00000602716 HS1BP3Q53T59 392 aa19.95■□□□□ 0.78
PPFIA3-207ENST00000602716 MTMR8Q96EF0 704 aa19.95■□□□□ 0.78
PPFIA3-207ENST00000602716 CLMNQ96JQ2 1002 aa19.95■□□□□ 0.78
PPFIA3-207ENST00000602716 PICK1Q9NRD5 415 aa19.95■□□□□ 0.78
PPFIA3-207ENST00000602716 FBXO28Q9NVF7 368 aa19.95■□□□□ 0.78
PPFIA3-207ENST00000602716 PHIPQ8WWQ0 1821 aa19.95■□□□□ 0.78
PPFIA3-207ENST00000602716 TRIM75PA6NK02 468 aa19.95■□□□□ 0.78
PPFIA3-207ENST00000602716 SPP2Q13103 211 aa19.95■□□□□ 0.78
PPFIA3-207ENST00000602716 COA7Q96BR5 231 aa19.95■□□□□ 0.78
PPFIA3-207ENST00000602716 USP28Q96RU2 1077 aa19.95■□□□□ 0.78
PPFIA3-207ENST00000602716 KIAA1683Q9H0B3 1180 aa19.95■□□□□ 0.78
PPFIA3-207ENST00000602716 GINM1Q9NU53 330 aa19.95■□□□□ 0.78
PPFIA3-207ENST00000602716 BARHL2Q9NY43 387 aa19.95■□□□□ 0.78
PPFIA3-207ENST00000602716 ATP6V1DQ9Y5K8 247 aa19.95■□□□□ 0.78
PPFIA3-207ENST00000602716 U2AF2P26368 475 aaKnown RBP eCLIP19.94■□□□□ 0.78
PPFIA3-207ENST00000602716 IKQ13123 557 aaPredicted RBP19.94■□□□□ 0.78
PPFIA3-207ENST00000602716 SH2D4AQ9H788 454 aa19.94■□□□□ 0.78
PPFIA3-207ENST00000602716 EMILIN3Q9NT22 766 aa19.94■□□□□ 0.78
PPFIA3-207ENST00000602716 SEC63Q9UGP8 760 aaKnown RBP19.94■□□□□ 0.78
PPFIA3-207ENST00000602716 ZHX2Q9Y6X8 837 aa19.94■□□□□ 0.78
PPFIA3-207ENST00000602716 MYH15Q9Y2K3 1946 aa19.94■□□□□ 0.78
PPFIA3-207ENST00000602716 CEBPZQ03701 1054 aaKnown RBP19.93■□□□□ 0.78
PPFIA3-207ENST00000602716 CDC37Q16543 378 aaPredicted RBP19.93■□□□□ 0.78
PPFIA3-207ENST00000602716 QRICH1Q2TAL8 776 aa19.93■□□□□ 0.78
PPFIA3-207ENST00000602716 SYDE2Q5VT97 1194 aa19.93■□□□□ 0.78
PPFIA3-207ENST00000602716 MYSM1Q5VVJ2 828 aa19.93■□□□□ 0.78
PPFIA3-207ENST00000602716 RGS22Q8NE09 1264 aa19.93■□□□□ 0.78
PPFIA3-207ENST00000602716 RASGRP4Q8TDF6 673 aa19.93■□□□□ 0.78
PPFIA3-207ENST00000602716 TNFRSF25Q93038 417 aa19.93■□□□□ 0.78
PPFIA3-207ENST00000602716 NLRP5P59047 1200 aa19.93■□□□□ 0.78
PPFIA3-207ENST00000602716 WDR18Q9BV38 432 aa19.93■□□□□ 0.78
PPFIA3-207ENST00000602716 GADD45BO75293 160 aaPredicted RBP19.92■□□□□ 0.78
PPFIA3-207ENST00000602716 MAP3K9P80192 1104 aa19.92■□□□□ 0.78
PPFIA3-207ENST00000602716 SAMD1Q6SPF0 538 aaPredicted RBP19.92■□□□□ 0.78
PPFIA3-207ENST00000602716 BTNL9Q6UXG8 535 aa19.92■□□□□ 0.78
PPFIA3-207ENST00000602716 NOSTRINQ8IVI9 506 aa19.92■□□□□ 0.78
PPFIA3-207ENST00000602716 ZNF280CQ8ND82 737 aa19.92■□□□□ 0.78
PPFIA3-207ENST00000602716 ZNF408Q9H9D4 720 aa19.92■□□□□ 0.78
PPFIA3-207ENST00000602716 PRR12Q9ULL5 1215 aa19.92■□□□□ 0.78
PPFIA3-207ENST00000602716 ZBTB5O15062 677 aa19.92■□□□□ 0.78
PPFIA3-207ENST00000602716 PPP1R12BO60237 982 aaPredicted RBP19.92■□□□□ 0.78
PPFIA3-207ENST00000602716 XBP1P17861 261 aa19.92■□□□□ 0.78
PPFIA3-207ENST00000602716 VCAM1P19320 739 aa19.92■□□□□ 0.78
PPFIA3-207ENST00000602716 KRT2P35908 639 aa19.92■□□□□ 0.78
PPFIA3-207ENST00000602716 NAPAP54920 295 aa19.92■□□□□ 0.78
PPFIA3-207ENST00000602716 KRT85P78386 507 aa19.92■□□□□ 0.78
PPFIA3-207ENST00000602716 GNL2Q13823 731 aaKnown RBP19.92■□□□□ 0.78
PPFIA3-207ENST00000602716 TPRNQ4KMQ1 711 aa19.92■□□□□ 0.78
PPFIA3-207ENST00000602716 BRAPQ7Z569 592 aa19.92■□□□□ 0.78
PPFIA3-207ENST00000602716 TMEM87AQ8NBN3 555 aa19.92■□□□□ 0.78
PPFIA3-207ENST00000602716 ELP3Q9H9T3 547 aa19.92■□□□□ 0.78
PPFIA3-207ENST00000602716 TCHHQ07283 1943 aa19.91■□□□□ 0.78
PPFIA3-207ENST00000602716 PNMA6FA0A0J9YX94 578 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms