RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 IGDCC4Q8TDY8 1250 aa22.92■■□□□ 1.26
LSM4-203ENST00000593829 COA7Q96BR5 231 aa22.92■■□□□ 1.26
LSM4-203ENST00000593829 SPATC1LQ9H0A9 340 aa22.92■■□□□ 1.26
LSM4-203ENST00000593829 A0A0G2JMZ2 1700 aa22.92■■□□□ 1.26
LSM4-203ENST00000593829 ZSWIM8A7E2V4 1837 aa22.91■■□□□ 1.26
LSM4-203ENST00000593829 PRMT2P55345 433 aa22.91■■□□□ 1.26
LSM4-203ENST00000593829 PLS1Q14651 629 aa22.91■■□□□ 1.26
LSM4-203ENST00000593829 TMEM132BQ14DG7 1078 aa22.91■■□□□ 1.26
LSM4-203ENST00000593829 ADCK5Q3MIX3 580 aa22.91■■□□□ 1.26
LSM4-203ENST00000593829 FBXO46Q6PJ61 603 aaPredicted RBP22.91■■□□□ 1.26
LSM4-203ENST00000593829 TMEM87BQ96K49 555 aa22.91■■□□□ 1.26
LSM4-203ENST00000593829 PORCNQ9H237 461 aa22.91■■□□□ 1.26
LSM4-203ENST00000593829 SRRDQ9UH36 339 aa22.91■■□□□ 1.26
LSM4-203ENST00000593829 PTPN22Q9Y2R2 807 aa22.91■■□□□ 1.26
LSM4-203ENST00000593829 SNX14Q9Y5W7 946 aa22.91■■□□□ 1.26
LSM4-203ENST00000593829 FRMPD2Q68DX3 1309 aaPredicted RBP22.91■■□□□ 1.26
LSM4-203ENST00000593829 ZBED4O75132 1171 aa22.9■■□□□ 1.26
LSM4-203ENST00000593829 FDX1P10109 184 aa22.9■■□□□ 1.26
LSM4-203ENST00000593829 ZNF543Q08ER8 600 aa22.9■■□□□ 1.26
LSM4-203ENST00000593829 REPS2Q8NFH8 660 aa22.9■■□□□ 1.26
LSM4-203ENST00000593829 GPCPD1Q9NPB8 672 aa22.9■■□□□ 1.26
LSM4-203ENST00000593829 CTDP1Q9Y5B0 961 aaPredicted RBP22.9■■□□□ 1.26
LSM4-203ENST00000593829 MGAMO43451 1857 aa22.9■■□□□ 1.26
LSM4-203ENST00000593829 HMGB1P09429 215 aaKnown RBP22.9■■□□□ 1.26
LSM4-203ENST00000593829 COL9A3Q14050 684 aaPredicted RBP22.9■■□□□ 1.26
LSM4-203ENST00000593829 GPATCH4Q5T3I0 446 aaKnown RBP22.9■■□□□ 1.26
LSM4-203ENST00000593829 MOV10L1Q9BXT6 1211 aaKnown RBP22.9■■□□□ 1.26
LSM4-203ENST00000593829 TTBK2Q6IQ55 1244 aa22.89■■□□□ 1.25
LSM4-203ENST00000593829 BTNL9Q6UXG8 535 aa22.89■■□□□ 1.25
LSM4-203ENST00000593829 SLKQ9H2G2 1235 aaPredicted RBP22.89■■□□□ 1.25
LSM4-203ENST00000593829 SLC38A10Q9HBR0 1119 aa22.89■■□□□ 1.25
LSM4-203ENST00000593829 SENP2Q9HC62 589 aa22.89■■□□□ 1.25
LSM4-203ENST00000593829 CWC22Q9HCG8 908 aaKnown RBP22.89■■□□□ 1.25
LSM4-203ENST00000593829 DHX32Q7L7V1 743 aaKnown RBP22.88■■□□□ 1.25
LSM4-203ENST00000593829 TMTC2Q8N394 836 aa22.88■■□□□ 1.25
LSM4-203ENST00000593829 LY9Q9HBG7 655 aa22.88■■□□□ 1.25
LSM4-203ENST00000593829 ZNF214Q9UL59 606 aaPredicted RBP22.88■■□□□ 1.25
LSM4-203ENST00000593829 PRR12Q9ULL5 1215 aa22.88■■□□□ 1.25
LSM4-203ENST00000593829 WDR19Q8NEZ3 1342 aa22.88■■□□□ 1.25
LSM4-203ENST00000593829 STAT3P40763 770 aa22.88■■□□□ 1.25
LSM4-203ENST00000593829 PRKCZQ05513 592 aa22.88■■□□□ 1.25
LSM4-203ENST00000593829 WDR78Q5VTH9 848 aa22.88■■□□□ 1.25
LSM4-203ENST00000593829 GPR142Q7Z601 462 aa22.88■■□□□ 1.25
LSM4-203ENST00000593829 SHCBP1Q8NEM2 672 aa22.88■■□□□ 1.25
LSM4-203ENST00000593829 JAKMIP1Q96N16 626 aaKnown RBP22.88■■□□□ 1.25
LSM4-203ENST00000593829 SH2B2O14492 632 aaPredicted RBP22.87■■□□□ 1.25
LSM4-203ENST00000593829 PARP1P09874 1014 aaKnown RBP22.87■■□□□ 1.25
LSM4-203ENST00000593829 SLC16A2P36021 539 aa22.87■■□□□ 1.25
LSM4-203ENST00000593829 EXOSC10Q01780 885 aaKnown RBP22.87■■□□□ 1.25
LSM4-203ENST00000593829 ASPRV1Q53RT3 343 aa22.87■■□□□ 1.25
LSM4-203ENST00000593829 PLEKHH3Q7Z736 793 aa22.87■■□□□ 1.25
LSM4-203ENST00000593829 CATIPQ7Z7H3 387 aa22.87■■□□□ 1.25
LSM4-203ENST00000593829 GPHNQ9NQX3 736 aaPredicted RBP22.87■■□□□ 1.25
LSM4-203ENST00000593829 ATP2A1O14983 1001 aa22.86■■□□□ 1.25
LSM4-203ENST00000593829 SLC25A27O95847 323 aa22.86■■□□□ 1.25
LSM4-203ENST00000593829 GOLGA8HP0CJ92 632 aa22.86■■□□□ 1.25
LSM4-203ENST00000593829 ERCC3P19447 782 aa22.86■■□□□ 1.25
LSM4-203ENST00000593829 LIFRP42702 1097 aa22.86■■□□□ 1.25
LSM4-203ENST00000593829 SYDE2Q5VT97 1194 aa22.86■■□□□ 1.25
LSM4-203ENST00000593829 RIOX2Q8IUF8 465 aa22.86■■□□□ 1.25
LSM4-203ENST00000593829 TEX13BQ9BXU2 312 aa22.86■■□□□ 1.25
LSM4-203ENST00000593829 MROH8Q9H579 483 aa22.86■■□□□ 1.25
LSM4-203ENST00000593829 GABRQQ9UN88 632 aa22.86■■□□□ 1.25
LSM4-203ENST00000593829 PTCH2Q9Y6C5 1203 aa22.86■■□□□ 1.25
LSM4-203ENST00000593829 PSMA5P28066 241 aa22.86■■□□□ 1.25
LSM4-203ENST00000593829 FLT3LGP49771 235 aa22.86■■□□□ 1.25
LSM4-203ENST00000593829 OAZ1P54368 228 aa22.86■■□□□ 1.25
LSM4-203ENST00000593829 NCAPG2Q86XI2 1143 aa22.86■■□□□ 1.25
LSM4-203ENST00000593829 CPXCR1Q8N123 301 aa22.86■■□□□ 1.25
LSM4-203ENST00000593829 LRRC2Q9BYS8 371 aa22.86■■□□□ 1.25
LSM4-203ENST00000593829 IVNS1ABPQ9Y6Y0 642 aa22.86■■□□□ 1.25
LSM4-203ENST00000593829 COL11A1P12107 1806 aaPredicted RBP22.85■■□□□ 1.25
LSM4-203ENST00000593829 FSD2A1L4K1 749 aa22.85■■□□□ 1.25
LSM4-203ENST00000593829 COPB2P35606 906 aa22.85■■□□□ 1.25
LSM4-203ENST00000593829 SNRNP48Q6IEG0 339 aaKnown RBP22.85■■□□□ 1.25
LSM4-203ENST00000593829 NFXL1Q6ZNB6 911 aa22.85■■□□□ 1.25
LSM4-203ENST00000593829 RAET1EQ8TD07 263 aa22.85■■□□□ 1.25
LSM4-203ENST00000593829 RAVER2Q9HCJ3 691 aaKnown RBP22.85■■□□□ 1.25
LSM4-203ENST00000593829 GJD2Q9UKL4 321 aa22.85■■□□□ 1.25
LSM4-203ENST00000593829 CCDC69A6NI79 296 aa22.84■■□□□ 1.25
LSM4-203ENST00000593829 TROAPQ12815 778 aa22.84■■□□□ 1.25
LSM4-203ENST00000593829 BLOC1S2Q6QNY1 142 aa22.84■■□□□ 1.25
LSM4-203ENST00000593829 NUDT12Q9BQG2 462 aa22.84■■□□□ 1.25
LSM4-203ENST00000593829 CHMP5Q9NZZ3 219 aa22.84■■□□□ 1.25
LSM4-203ENST00000593829 MCM4P33991 863 aa22.84■■□□□ 1.25
LSM4-203ENST00000593829 SOCS4Q8WXH5 440 aa22.84■■□□□ 1.25
LSM4-203ENST00000593829 HPS5Q9UPZ3 1129 aa22.84■■□□□ 1.25
LSM4-203ENST00000593829 STRNO43815 780 aa22.83■■□□□ 1.25
LSM4-203ENST00000593829 ZNF654Q8IZM8 581 aa22.83■■□□□ 1.25
LSM4-203ENST00000593829 TCEANC2Q96MN5 208 aa22.83■■□□□ 1.25
LSM4-203ENST00000593829 UBA5Q9GZZ9 404 aa22.83■■□□□ 1.25
LSM4-203ENST00000593829 RANBP17Q9H2T7 1088 aaKnown RBP22.83■■□□□ 1.25
LSM4-203ENST00000593829 SLC15A5A6NIM6 579 aa22.82■■□□□ 1.24
LSM4-203ENST00000593829 PTPREP23469 700 aa22.82■■□□□ 1.24
LSM4-203ENST00000593829 SNAP25P60880 206 aa22.82■■□□□ 1.24
LSM4-203ENST00000593829 IRF5Q13568 498 aa22.82■■□□□ 1.24
LSM4-203ENST00000593829 GRM4Q14833 912 aa22.82■■□□□ 1.24
LSM4-203ENST00000593829 MORN1Q5T089 497 aa22.82■■□□□ 1.24
LSM4-203ENST00000593829 SGMS1Q86VZ5 419 aa22.82■■□□□ 1.24
LSM4-203ENST00000593829 MAD2L2Q9UI95 211 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms