RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-222ENST00000582594 SAMM50Q9Y512 469 aa10.74□□□□□ -0.69
PPP4R1-222ENST00000582594 SPATA31A3Q5VYP0 1347 aa10.73□□□□□ -0.69
PPP4R1-222ENST00000582594 AHDC1Q5TGY3 1603 aaPredicted RBP10.73□□□□□ -0.69
PPP4R1-222ENST00000582594 DCCP43146 1447 aa10.73□□□□□ -0.69
PPP4R1-222ENST00000582594 GOLGA6BA6NDN3 693 aa10.73□□□□□ -0.69
PPP4R1-222ENST00000582594 GTPBP6O43824 516 aaPredicted RBP10.73□□□□□ -0.69
PPP4R1-222ENST00000582594 IRAK1P51617 712 aa10.73□□□□□ -0.69
PPP4R1-222ENST00000582594 SLC7A5Q01650 507 aa10.73□□□□□ -0.69
PPP4R1-222ENST00000582594 RNF26Q9BY78 433 aaPredicted RBP10.73□□□□□ -0.69
PPP4R1-222ENST00000582594 TRMT112Q9UI30 125 aaKnown RBP10.73□□□□□ -0.69
PPP4R1-222ENST00000582594 MYH13Q9UKX3 1938 aa10.73□□□□□ -0.69
PPP4R1-222ENST00000582594 B4DLN1 442 aa10.73□□□□□ -0.69
PPP4R1-222ENST00000582594 MCM3P25205 808 aa10.73□□□□□ -0.69
PPP4R1-222ENST00000582594 EIF5P55010 431 aaKnown RBP10.73□□□□□ -0.69
PPP4R1-222ENST00000582594 ZNF658Q5TYW1 1059 aaPredicted RBP10.73□□□□□ -0.69
PPP4R1-222ENST00000582594 PAPD7Q5XG87 772 aaKnown RBP10.73□□□□□ -0.69
PPP4R1-222ENST00000582594 ZNF512BQ96KM6 892 aaPredicted RBP10.73□□□□□ -0.69
PPP4R1-222ENST00000582594 PLA2G12BQ9BX93 195 aa10.73□□□□□ -0.69
PPP4R1-222ENST00000582594 PARP4Q9UKK3 1724 aaKnown RBP10.73□□□□□ -0.69
PPP4R1-222ENST00000582594 KCPQ6ZWJ8 1503 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 A0A087WUV0 522 aaPredicted RBP10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 GUCY2CP25092 1073 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 CKAP4Q07065 602 aaKnown RBP10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 TOM1L2Q6ZVM7 507 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 NLRP10Q86W26 655 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 GPATCH11Q8N954 259 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 RASSF8Q8NHQ8 419 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 BCAS4Q8TDM0 211 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 KAT2BQ92831 832 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 DEF6Q9H4E7 631 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 EHD2Q9NZN4 543 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 SOS2Q07890 1332 aaPredicted RBP10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 NID2Q14112 1375 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 KRT86O43790 486 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 ERLIN2O94905 339 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 VEGFAP15692 232 aaPredicted RBP10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 BCAMP50895 628 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 GNGT1P63211 74 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 ATP2C1P98194 919 aaPredicted RBP10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 FBXW10Q5XX13 1052 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 TMTC2Q8N394 836 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 TRIM47Q96LD4 638 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 BRMS1Q9HCU9 246 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 FAM169AQ9Y6X4 670 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 MYH2Q9UKX2 1941 aa10.72□□□□□ -0.69
PPP4R1-222ENST00000582594 LOC102724159A0A0B4J2E5 919 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 PWP2Q15269 919 aaKnown RBP10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 PUM3Q15397 648 aaKnown RBP10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 SEC23AQ15436 765 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 KRT26Q7Z3Y9 468 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 ENAHQ8N8S7 591 aaPredicted RBP10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 LPIN2Q92539 896 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 DNAJC7Q99615 494 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 LRRC1Q9BTT6 524 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 CAPS2Q9BXY5 557 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 NHEJ1Q9H9Q4 299 aaPredicted RBP10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 LRP2BPQ9P2M1 347 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 DMGDHQ9UI17 866 aaKnown RBP10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 TARSL2A2RTX5 802 aaKnown RBP10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 PP2D1A8MPX8 630 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 LGALS16A8MUM7 142 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 EBAG9O00559 213 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 TRIM21P19474 475 aaKnown RBP10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 CXCR5P32302 372 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 STAT6P42226 847 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 NLRP5P59047 1200 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 KRT83P78385 493 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 NPY5RQ15761 445 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 IFIT1BQ5T764 474 aaKnown RBP10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 BCL9LQ86UU0 1499 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 PCDH11XQ9BZA7 1347 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 PCDH11YQ9BZA8 1340 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 LRWD1Q9UFC0 647 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 CAPN11Q9UMQ6 739 aa10.71□□□□□ -0.69
PPP4R1-222ENST00000582594 C1orf167Q5SNV9 1468 aa10.71□□□□□ -0.7
PPP4R1-222ENST00000582594 ERVV-2B6SEH9 535 aa10.71□□□□□ -0.7
PPP4R1-222ENST00000582594 PRPF3O43395 683 aaKnown RBP10.71□□□□□ -0.7
PPP4R1-222ENST00000582594 PLEKP08567 350 aaPredicted RBP10.71□□□□□ -0.7
PPP4R1-222ENST00000582594 PPARDQ03181 441 aa10.71□□□□□ -0.7
PPP4R1-222ENST00000582594 FUT2Q10981 343 aa10.71□□□□□ -0.7
PPP4R1-222ENST00000582594 TRIM28Q13263 835 aaKnown RBP10.71□□□□□ -0.7
PPP4R1-222ENST00000582594 ADGRA1Q86SQ6 560 aa10.71□□□□□ -0.7
PPP4R1-222ENST00000582594 MLXIPQ9HAP2 919 aa10.71□□□□□ -0.7
PPP4R1-222ENST00000582594 ABCF2Q9UG63 623 aa10.71□□□□□ -0.7
PPP4R1-222ENST00000582594 ASAP1Q9ULH1 1129 aa10.71□□□□□ -0.7
PPP4R1-222ENST00000582594 RTL9Q8NET4 1388 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 H7C1D1 291 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 SHOX2O60902 331 aaPredicted RBP10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 IPO7O95373 1038 aaKnown RBP10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 SLC5A1P13866 664 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 CYP7A1P22680 504 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 CYLC1P35663 651 aaPredicted RBP10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 EVX2Q03828 476 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 GIGYF2Q6Y7W6 1299 aaKnown RBP10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 MMS22LQ6ZRQ5 1243 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 CATIPQ7Z7H3 387 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 ANKRD18AQ8IVF6 992 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 ZNF507Q8TCN5 953 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 ESR2Q92731 530 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 TNFRSF25Q93038 417 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms