RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 MTX1Q13505 466 aa13.01□□□□□ -0.33
TOP3A-210ENST00000580713 KCTD2Q14681 263 aa13.01□□□□□ -0.33
TOP3A-210ENST00000580713 RASIP1Q5U651 963 aa13.01□□□□□ -0.33
TOP3A-210ENST00000580713 BBXQ8WY36 941 aaPredicted RBP13.01□□□□□ -0.33
TOP3A-210ENST00000580713 GLT1D1Q96MS3 346 aa13.01□□□□□ -0.33
TOP3A-210ENST00000580713 LRFN3Q9BTN0 628 aa13.01□□□□□ -0.33
TOP3A-210ENST00000580713 MROH7Q68CQ1 1323 aa13.01□□□□□ -0.33
TOP3A-210ENST00000580713 MYH1P12882 1939 aa13.01□□□□□ -0.33
TOP3A-210ENST00000580713 FOCADQ5VW36 1801 aa13□□□□□ -0.33
TOP3A-210ENST00000580713 SYNGAP1Q96PV0 1343 aa13□□□□□ -0.33
TOP3A-210ENST00000580713 SYNRGQ9UMZ2 1314 aa13□□□□□ -0.33
TOP3A-210ENST00000580713 TLR3O15455 904 aaKnown RBP13□□□□□ -0.33
TOP3A-210ENST00000580713 ZNF865P0CJ78 1059 aaPredicted RBP13□□□□□ -0.33
TOP3A-210ENST00000580713 KCNQ1P51787 676 aa13□□□□□ -0.33
TOP3A-210ENST00000580713 TNNI3KQ59H18 835 aa13□□□□□ -0.33
TOP3A-210ENST00000580713 TMEM31Q5JXX7 168 aa13□□□□□ -0.33
TOP3A-210ENST00000580713 ZKSCAN2Q63HK3 967 aa13□□□□□ -0.33
TOP3A-210ENST00000580713 SPICE1Q8N0Z3 855 aa13□□□□□ -0.33
TOP3A-210ENST00000580713 MAGEB6Q8N7X4 407 aa13□□□□□ -0.33
TOP3A-210ENST00000580713 EPHX3Q9H6B9 360 aa13□□□□□ -0.33
TOP3A-210ENST00000580713 FAM184BQ9ULE4 1060 aa13□□□□□ -0.33
TOP3A-210ENST00000580713 ARIH1Q9Y4X5 557 aaPredicted RBP13□□□□□ -0.33
TOP3A-210ENST00000580713 FPGT-TNNI3KV9GXZ4 949 aa13□□□□□ -0.33
TOP3A-210ENST00000580713 IPO8O15397 1037 aaKnown RBP12.99□□□□□ -0.33
TOP3A-210ENST00000580713 IGSF3O75054 1194 aa12.99□□□□□ -0.33
TOP3A-210ENST00000580713 FGBP02675 491 aa12.99□□□□□ -0.33
TOP3A-210ENST00000580713 CYP2C18P33260 490 aa12.99□□□□□ -0.33
TOP3A-210ENST00000580713 PLCB2Q00722 1185 aa12.99□□□□□ -0.33
TOP3A-210ENST00000580713 TMEM132BQ14DG7 1078 aa12.99□□□□□ -0.33
TOP3A-210ENST00000580713 ZNF792Q3KQV3 632 aa12.99□□□□□ -0.33
TOP3A-210ENST00000580713 KIAA1755Q5JYT7 1200 aa12.99□□□□□ -0.33
TOP3A-210ENST00000580713 KLHDC9Q8NEP7 349 aa12.99□□□□□ -0.33
TOP3A-210ENST00000580713 HERVK_113Q902F9 699 aa12.99□□□□□ -0.33
TOP3A-210ENST00000580713 SPC25Q9HBM1 224 aa12.99□□□□□ -0.33
TOP3A-210ENST00000580713 ARHGEF10LQ9HCE6 1279 aa12.99□□□□□ -0.33
TOP3A-210ENST00000580713 IL23AQ9NPF7 189 aa12.99□□□□□ -0.33
TOP3A-210ENST00000580713 ZHX1Q9UKY1 873 aaPredicted RBP12.99□□□□□ -0.33
TOP3A-210ENST00000580713 DIS3Q9Y2L1 958 aaKnown RBP12.99□□□□□ -0.33
TOP3A-210ENST00000580713 YBX2Q9Y2T7 364 aaKnown RBP12.99□□□□□ -0.33
TOP3A-210ENST00000580713 ELP1O95163 1332 aa12.98□□□□□ -0.33
TOP3A-210ENST00000580713 PNMA6EA0A0J9YXQ4 647 aa12.98□□□□□ -0.33
TOP3A-210ENST00000580713 A0A0U1RQG5 324 aaPredicted RBP12.98□□□□□ -0.33
TOP3A-210ENST00000580713 GNAI2P04899 355 aa12.98□□□□□ -0.33
TOP3A-210ENST00000580713 C6orf222P0C671 652 aaPredicted RBP12.98□□□□□ -0.33
TOP3A-210ENST00000580713 MS4A1P11836 297 aa12.98□□□□□ -0.33
TOP3A-210ENST00000580713 PPP2R2DQ66LE6 453 aa12.98□□□□□ -0.33
TOP3A-210ENST00000580713 OTOP2Q7RTS6 562 aa12.98□□□□□ -0.33
TOP3A-210ENST00000580713 PCSK9Q8NBP7 692 aaKnown RBP12.98□□□□□ -0.33
TOP3A-210ENST00000580713 GPR108Q9NPR9 543 aa12.98□□□□□ -0.33
TOP3A-210ENST00000580713 ZNFX1Q9P2E3 1918 aaKnown RBP12.98□□□□□ -0.33
TOP3A-210ENST00000580713 ROBO3Q96MS0 1386 aa12.97□□□□□ -0.33
TOP3A-210ENST00000580713 MYADML2A6NDP7 307 aa12.97□□□□□ -0.33
TOP3A-210ENST00000580713 ARVCFO00192 962 aa12.97□□□□□ -0.33
TOP3A-210ENST00000580713 ASGR1P07306 291 aa12.97□□□□□ -0.33
TOP3A-210ENST00000580713 STAT3P40763 770 aa12.97□□□□□ -0.33
TOP3A-210ENST00000580713 CDK7P50613 346 aa12.97□□□□□ -0.33
TOP3A-210ENST00000580713 RABGGTBP53611 331 aa12.97□□□□□ -0.33
TOP3A-210ENST00000580713 IRX5P78411 483 aaPredicted RBP12.97□□□□□ -0.33
TOP3A-210ENST00000580713 TMEM179Q6ZVK1 233 aa12.97□□□□□ -0.33
TOP3A-210ENST00000580713 RIOX2Q8IUF8 465 aa12.97□□□□□ -0.33
TOP3A-210ENST00000580713 ARHGAP45Q92619 1136 aa12.97□□□□□ -0.33
TOP3A-210ENST00000580713 SH2D4AQ9H788 454 aa12.97□□□□□ -0.33
TOP3A-210ENST00000580713 MCM9Q9NXL9 1143 aa12.97□□□□□ -0.33
TOP3A-210ENST00000580713 CHD9Q3L8U1 2897 aa12.96□□□□□ -0.33
TOP3A-210ENST00000580713 ERC2O15083 957 aa12.96□□□□□ -0.33
TOP3A-210ENST00000580713 WDR46O15213 610 aaKnown RBP12.96□□□□□ -0.33
TOP3A-210ENST00000580713 GTPBP6O43824 516 aaPredicted RBP12.96□□□□□ -0.33
TOP3A-210ENST00000580713 RAD21O60216 631 aa12.96□□□□□ -0.33
TOP3A-210ENST00000580713 DUSP11O75319 330 aaKnown RBP12.96□□□□□ -0.33
TOP3A-210ENST00000580713 TRIM27P14373 513 aa12.96□□□□□ -0.33
TOP3A-210ENST00000580713 ICA1Q05084 483 aa12.96□□□□□ -0.33
TOP3A-210ENST00000580713 GABPAQ06546 454 aa12.96□□□□□ -0.33
TOP3A-210ENST00000580713 GNASQ5JWF2 1037 aa12.96□□□□□ -0.33
TOP3A-210ENST00000580713 C20orf194Q5TEA3 1177 aa12.96□□□□□ -0.33
TOP3A-210ENST00000580713 CCSAPQ6IQ19 270 aaPredicted RBP12.96□□□□□ -0.33
TOP3A-210ENST00000580713 ZNF467Q7Z7K2 595 aaPredicted RBP12.96□□□□□ -0.33
TOP3A-210ENST00000580713 ALYREFQ86V81 257 aaKnown RBP12.96□□□□□ -0.33
TOP3A-210ENST00000580713 CLEC10AQ8IUN9 316 aa12.96□□□□□ -0.33
TOP3A-210ENST00000580713 HS6ST3Q8IZP7 471 aa12.96□□□□□ -0.33
TOP3A-210ENST00000580713 DDX11Q96FC9 970 aa12.96□□□□□ -0.33
TOP3A-210ENST00000580713 ZNF512BQ96KM6 892 aaPredicted RBP12.96□□□□□ -0.33
TOP3A-210ENST00000580713 VCPKMTQ9H867 229 aa12.96□□□□□ -0.33
TOP3A-210ENST00000580713 FBXO28Q9NVF7 368 aa12.96□□□□□ -0.33
TOP3A-210ENST00000580713 MYO5AQ9Y4I1 1855 aaKnown RBP12.95□□□□□ -0.34
TOP3A-210ENST00000580713 MAGEB6P1A0A0J9YX57 407 aa12.95□□□□□ -0.34
TOP3A-210ENST00000580713 FAM86C2PA6NEL3 165 aa12.95□□□□□ -0.34
TOP3A-210ENST00000580713 ZBBXA8MT70 800 aa12.95□□□□□ -0.34
TOP3A-210ENST00000580713 MYOGP15173 224 aa12.95□□□□□ -0.34
TOP3A-210ENST00000580713 COPB2P35606 906 aa12.95□□□□□ -0.34
TOP3A-210ENST00000580713 SLC4A3P48751 1232 aa12.95□□□□□ -0.34
TOP3A-210ENST00000580713 CCL23P55773 120 aa12.95□□□□□ -0.34
TOP3A-210ENST00000580713 ERICH6BQ5W0A0 696 aa12.95□□□□□ -0.34
TOP3A-210ENST00000580713 FAM126BQ8IXS8 530 aa12.95□□□□□ -0.34
TOP3A-210ENST00000580713 FTSJ3Q8IY81 847 aaKnown RBP12.95□□□□□ -0.34
TOP3A-210ENST00000580713 PANK1Q8TE04 598 aa12.95□□□□□ -0.34
TOP3A-210ENST00000580713 CRNKL1Q9BZJ0 848 aaKnown RBP12.95□□□□□ -0.34
TOP3A-210ENST00000580713 CCDC8Q9H0W5 538 aaPredicted RBP12.95□□□□□ -0.34
TOP3A-210ENST00000580713 HIPK3Q9H422 1215 aa12.95□□□□□ -0.34
TOP3A-210ENST00000580713 TNNQ9UQP3 1299 aa12.95□□□□□ -0.34
TOP3A-210ENST00000580713 TMX2Q9Y320 296 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms