RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 CTCFLQ8NI51 663 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC8-204ENST00000578252 ACER1Q8TDN7 264 aa13.06□□□□□ -0.32
TRAPPC8-204ENST00000578252 CCDC102AQ96A19 550 aa13.06□□□□□ -0.32
TRAPPC8-204ENST00000578252 SH2B1Q9NRF2 756 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC8-204ENST00000578252 TMOD4Q9NZQ9 345 aa13.06□□□□□ -0.32
TRAPPC8-204ENST00000578252 CCDC196A0A1B0GTZ2 297 aa13.05□□□□□ -0.32
TRAPPC8-204ENST00000578252 SNHG28P0DPA3 235 aa13.05□□□□□ -0.32
TRAPPC8-204ENST00000578252 PSEN2P49810 448 aa13.05□□□□□ -0.32
TRAPPC8-204ENST00000578252 METAP2P50579 478 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRAPPC8-204ENST00000578252 GTF2A2P52657 109 aa13.05□□□□□ -0.32
TRAPPC8-204ENST00000578252 TROAPQ12815 778 aa13.05□□□□□ -0.32
TRAPPC8-204ENST00000578252 CAMK2BQ13554 666 aa13.05□□□□□ -0.32
TRAPPC8-204ENST00000578252 ASPRV1Q53RT3 343 aa13.05□□□□□ -0.32
TRAPPC8-204ENST00000578252 GPATCH4Q5T3I0 446 aaKnown RBP13.05□□□□□ -0.32
TRAPPC8-204ENST00000578252 SPRYD7Q5W111 196 aa13.05□□□□□ -0.32
TRAPPC8-204ENST00000578252 SLFN13Q68D06 897 aa13.05□□□□□ -0.32
TRAPPC8-204ENST00000578252 FASTKD5Q7L8L6 764 aaKnown RBP13.05□□□□□ -0.32
TRAPPC8-204ENST00000578252 RASAL3Q86YV0 1011 aa13.05□□□□□ -0.32
TRAPPC8-204ENST00000578252 HSCBQ8IWL3 235 aa13.05□□□□□ -0.32
TRAPPC8-204ENST00000578252 PROCA1Q8NCQ7 364 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC8-204ENST00000578252 RNF166Q96A37 237 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC8-204ENST00000578252 SENP2Q9HC62 589 aa13.05□□□□□ -0.32
TRAPPC8-204ENST00000578252 RBM28Q9NW13 759 aaKnown RBP13.05□□□□□ -0.32
TRAPPC8-204ENST00000578252 BRPF3Q9ULD4 1205 aa13.05□□□□□ -0.32
TRAPPC8-204ENST00000578252 NAP1L2Q9ULW6 460 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC8-204ENST00000578252 A0A0G2JLL6 359 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 RASSF10A6NK89 507 aa13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 GOLGA8AA7E2F4 631 aa13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 IRF6O14896 467 aa13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 WDR46O15213 610 aaKnown RBP13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 DHX16O60231 1041 aaKnown RBP13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 NDUFB10O96000 172 aa13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 SLC10A3P09131 477 aa13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 PDHBP11177 359 aa13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 CETPP11597 493 aa13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 PDIA3P30101 505 aaKnown RBP13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 ANP32AP39687 249 aaKnown RBP13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 SLC1A4P43007 532 aa13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 GNAQP50148 359 aa13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 GRM4Q14833 912 aa13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 ZYXQ15942 572 aaKnown RBP13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 PRRT2Q7Z6L0 340 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 MICU3Q86XE3 530 aa13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 NUP133Q8WUM0 1156 aa13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 LZTS2Q9BRK4 669 aa13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 SLKQ9H2G2 1235 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 TSHZ2Q9NRE2 1034 aa13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 TPCN1Q9ULQ1 816 aa13.04□□□□□ -0.32
TRAPPC8-204ENST00000578252 RAD21O60216 631 aa13.03□□□□□ -0.32
TRAPPC8-204ENST00000578252 PFKFB2O60825 505 aa13.03□□□□□ -0.32
TRAPPC8-204ENST00000578252 PARP1P09874 1014 aaKnown RBP13.03□□□□□ -0.32
TRAPPC8-204ENST00000578252 BMP3P12645 472 aa13.03□□□□□ -0.32
TRAPPC8-204ENST00000578252 GJA5P36382 358 aa13.03□□□□□ -0.32
TRAPPC8-204ENST00000578252 FOSBP53539 338 aa13.03□□□□□ -0.32
TRAPPC8-204ENST00000578252 HMGCS2P54868 508 aa13.03□□□□□ -0.32
TRAPPC8-204ENST00000578252 ZNF543Q08ER8 600 aa13.03□□□□□ -0.32
TRAPPC8-204ENST00000578252 PABPC4Q13310 644 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRAPPC8-204ENST00000578252 BECN1Q14457 450 aa13.03□□□□□ -0.32
TRAPPC8-204ENST00000578252 RTN1Q16799 776 aa13.03□□□□□ -0.32
TRAPPC8-204ENST00000578252 CCDC96Q2M329 555 aa13.03□□□□□ -0.32
TRAPPC8-204ENST00000578252 DMRTA1Q5VZB9 504 aa13.03□□□□□ -0.32
TRAPPC8-204ENST00000578252 CPLX2Q6PUV4 134 aaKnown RBP13.03□□□□□ -0.32
TRAPPC8-204ENST00000578252 NOL8Q76FK4 1167 aaKnown RBP13.03□□□□□ -0.32
TRAPPC8-204ENST00000578252 FANCBQ8NB91 859 aa13.03□□□□□ -0.32
TRAPPC8-204ENST00000578252 KCNK17Q96T54 332 aa13.03□□□□□ -0.32
TRAPPC8-204ENST00000578252 MANSC4A6NHS7 340 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC8-204ENST00000578252 K7ELQ4 463 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC8-204ENST00000578252 PLA2G6O60733 806 aa13.02□□□□□ -0.33
TRAPPC8-204ENST00000578252 CD2BP2O95400 341 aaKnown RBP13.02□□□□□ -0.33
TRAPPC8-204ENST00000578252 VCAM1P19320 739 aa13.02□□□□□ -0.33
TRAPPC8-204ENST00000578252 INHBEP58166 350 aa13.02□□□□□ -0.33
TRAPPC8-204ENST00000578252 ME3Q16798 604 aa13.02□□□□□ -0.33
TRAPPC8-204ENST00000578252 DEFB115Q30KQ5 88 aa13.02□□□□□ -0.33
TRAPPC8-204ENST00000578252 GADL1Q6ZQY3 521 aa13.02□□□□□ -0.33
TRAPPC8-204ENST00000578252 GTF3C6Q969F1 213 aa13.02□□□□□ -0.33
TRAPPC8-204ENST00000578252 MYL10Q9BUA6 226 aa13.02□□□□□ -0.33
TRAPPC8-204ENST00000578252 HPS5Q9UPZ3 1129 aa13.02□□□□□ -0.33
TRAPPC8-204ENST00000578252 PALM3A6NDB9 673 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 USP17L15C9J2P7 530 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 USP17L13C9JLJ4 530 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 USP17L11C9JVI0 530 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 USP17L18D6R9N7 530 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 USP17L22D6RA61 530 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 USP17L17D6RBQ6 530 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 USP17L19D6RCP7 530 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 USP17L20D6RJB6 530 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 CPLX1O14810 134 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 CDKL5O76039 1030 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 SMARCA1P28370 1054 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 USP17L24Q0WX57 530 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 SREBF2Q12772 1141 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 STK3Q13188 491 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 NOGQ13253 232 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 FAM160B2Q86V87 743 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 SPICE1Q8N0Z3 855 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 CHURC1Q8WUH1 139 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 TMX3Q96JJ7 454 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 MAD2L2Q9UI95 211 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 FEM1BQ9UK73 627 aa13.01□□□□□ -0.33
TRAPPC8-204ENST00000578252 ISY1Q9ULR0 285 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms