RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 PF4P02776 101 aa5.98□□□□□ -1.45
ERCC4-204ENST00000573018 CAMK2GQ13555 558 aaPredicted RBP5.98□□□□□ -1.45
ERCC4-204ENST00000573018 CCDC84Q86UT8 332 aaPredicted RBP5.98□□□□□ -1.45
ERCC4-204ENST00000573018 ZNF655Q8N720 491 aaPredicted RBP5.98□□□□□ -1.45
ERCC4-204ENST00000573018 LINC00116Q8NCU8 138 aa5.98□□□□□ -1.45
ERCC4-204ENST00000573018 PCDHA5Q9Y5H7 936 aa5.98□□□□□ -1.45
ERCC4-204ENST00000573018 FADS2P1A8MWK0 482 aa5.97□□□□□ -1.45
ERCC4-204ENST00000573018 UBOX5O94941 541 aa5.97□□□□□ -1.45
ERCC4-204ENST00000573018 PRAMEF1O95521 474 aa5.97□□□□□ -1.45
ERCC4-204ENST00000573018 ARL4AP40617 200 aa5.97□□□□□ -1.45
ERCC4-204ENST00000573018 LIMS1P48059 325 aa5.97□□□□□ -1.45
ERCC4-204ENST00000573018 TAF1CQ15572 869 aaPredicted RBP5.97□□□□□ -1.45
ERCC4-204ENST00000573018 GALNT18Q6P9A2 607 aa5.97□□□□□ -1.45
ERCC4-204ENST00000573018 FCRL2Q96LA5 508 aaPredicted RBP5.97□□□□□ -1.45
ERCC4-204ENST00000573018 NOC4LQ9BVI4 516 aaKnown RBP5.97□□□□□ -1.45
ERCC4-204ENST00000573018 MEIS1O00470 390 aa5.96□□□□□ -1.46
ERCC4-204ENST00000573018 FFAR3O14843 346 aa5.96□□□□□ -1.46
ERCC4-204ENST00000573018 PRKCAP17252 672 aa5.96□□□□□ -1.46
ERCC4-204ENST00000573018 KCNC1P48547 511 aa5.96□□□□□ -1.46
ERCC4-204ENST00000573018 RNF4P78317 190 aa5.96□□□□□ -1.46
ERCC4-204ENST00000573018 LMNB2Q03252 620 aa5.96□□□□□ -1.46
ERCC4-204ENST00000573018 NBPF9Q3BBW0 867 aa5.96□□□□□ -1.46
ERCC4-204ENST00000573018 HHIPL2Q6UWX4 724 aa5.96□□□□□ -1.46
ERCC4-204ENST00000573018 TNFRSF10DQ9UBN6 386 aa5.96□□□□□ -1.46
ERCC4-204ENST00000573018 WTIPA6NIX2 430 aaPredicted RBP5.95□□□□□ -1.46
ERCC4-204ENST00000573018 RGS13O14921 159 aa5.95□□□□□ -1.46
ERCC4-204ENST00000573018 SLURP1P55000 103 aa5.95□□□□□ -1.46
ERCC4-204ENST00000573018 CYP4F8P98187 520 aa5.95□□□□□ -1.46
ERCC4-204ENST00000573018 FAM160A1Q05DH4 1040 aa5.95□□□□□ -1.46
ERCC4-204ENST00000573018 LAPTM5Q13571 262 aa5.95□□□□□ -1.46
ERCC4-204ENST00000573018 ARSHQ5FYA8 562 aa5.95□□□□□ -1.46
ERCC4-204ENST00000573018 ADGRG2Q8IZP9 1017 aa5.95□□□□□ -1.46
ERCC4-204ENST00000573018 NUP43Q8NFH3 380 aa5.95□□□□□ -1.46
ERCC4-204ENST00000573018 FBXO27Q8NI29 283 aa5.95□□□□□ -1.46
ERCC4-204ENST00000573018 GPR20Q99678 358 aa5.95□□□□□ -1.46
ERCC4-204ENST00000573018 RAG1P15918 1043 aa5.94□□□□□ -1.46
ERCC4-204ENST00000573018 ST13P50502 369 aaKnown RBP5.94□□□□□ -1.46
ERCC4-204ENST00000573018 ZNF200P98182 395 aaPredicted RBP5.94□□□□□ -1.46
ERCC4-204ENST00000573018 TMEM62Q0P6H9 643 aa5.94□□□□□ -1.46
ERCC4-204ENST00000573018 NBPF12Q5TAG4 269 aaPredicted RBP5.94□□□□□ -1.46
ERCC4-204ENST00000573018 RPTNQ6XPR3 784 aa5.94□□□□□ -1.46
ERCC4-204ENST00000573018 ZNF512BQ96KM6 892 aaPredicted RBP5.94□□□□□ -1.46
ERCC4-204ENST00000573018 CDADC1Q9BWV3 514 aa5.94□□□□□ -1.46
ERCC4-204ENST00000573018 PRDM14Q9GZV8 571 aa5.94□□□□□ -1.46
ERCC4-204ENST00000573018 TNFRSF12AQ9NP84 129 aa5.94□□□□□ -1.46
ERCC4-204ENST00000573018 ERVK13-1Q9NX77 482 aa5.94□□□□□ -1.46
ERCC4-204ENST00000573018 A0A1B0GTL3 188 aa5.93□□□□□ -1.46
ERCC4-204ENST00000573018 SIGLEC6O43699 453 aa5.93□□□□□ -1.46
ERCC4-204ENST00000573018 POLR2BP30876 1174 aaKnown RBP5.93□□□□□ -1.46
ERCC4-204ENST00000573018 GBP2P32456 591 aaPredicted RBP5.93□□□□□ -1.46
ERCC4-204ENST00000573018 PLEKHN1Q494U1 663 aaPredicted RBP5.93□□□□□ -1.46
ERCC4-204ENST00000573018 SNAP47Q5SQN1 464 aa5.93□□□□□ -1.46
ERCC4-204ENST00000573018 UBXN11Q5T124 520 aa5.93□□□□□ -1.46
ERCC4-204ENST00000573018 SLCO6A1Q86UG4 719 aa5.93□□□□□ -1.46
ERCC4-204ENST00000573018 FERMT3Q86UX7 667 aa5.93□□□□□ -1.46
ERCC4-204ENST00000573018 LSRQ86X29 649 aaPredicted RBP5.93□□□□□ -1.46
ERCC4-204ENST00000573018 RHOVQ96L33 236 aa5.93□□□□□ -1.46
ERCC4-204ENST00000573018 K7ESM1 405 aa5.92□□□□□ -1.46
ERCC4-204ENST00000573018 TLR3O15455 904 aaKnown RBP5.92□□□□□ -1.46
ERCC4-204ENST00000573018 CTSHP09668 335 aa5.92□□□□□ -1.46
ERCC4-204ENST00000573018 PSMD2Q13200 908 aa5.92□□□□□ -1.46
ERCC4-204ENST00000573018 EAPPQ56P03 285 aaPredicted RBP5.92□□□□□ -1.46
ERCC4-204ENST00000573018 REC114Q7Z4M0 266 aa5.92□□□□□ -1.46
ERCC4-204ENST00000573018 GOLM1Q8NBJ4 401 aa5.92□□□□□ -1.46
ERCC4-204ENST00000573018 SPATA25Q9BR10 227 aa5.92□□□□□ -1.46
ERCC4-204ENST00000573018 CHST7Q9NS84 486 aa5.92□□□□□ -1.46
ERCC4-204ENST00000573018 USP40Q9NVE5 1235 aa5.92□□□□□ -1.46
ERCC4-204ENST00000573018 IMPACTQ9P2X3 320 aa5.92□□□□□ -1.46
ERCC4-204ENST00000573018 PARP2Q9UGN5 583 aa5.92□□□□□ -1.46
ERCC4-204ENST00000573018 MINDY4BA8MYZ0 360 aa5.91□□□□□ -1.46
ERCC4-204ENST00000573018 PFKLP17858 780 aa5.91□□□□□ -1.46
ERCC4-204ENST00000573018 IGFBP6P24592 240 aaPredicted RBP5.91□□□□□ -1.46
ERCC4-204ENST00000573018 CEBPAP49715 358 aaPredicted RBP5.91□□□□□ -1.46
ERCC4-204ENST00000573018 MLECQ14165 292 aa5.91□□□□□ -1.46
ERCC4-204ENST00000573018 MPP2Q14168 576 aa5.91□□□□□ -1.46
ERCC4-204ENST00000573018 CBX2Q14781 532 aaPredicted RBP5.91□□□□□ -1.46
ERCC4-204ENST00000573018 NT5DC1Q5TFE4 455 aa5.91□□□□□ -1.46
ERCC4-204ENST00000573018 ZC3H14Q6PJT7 736 aaKnown RBP5.91□□□□□ -1.46
ERCC4-204ENST00000573018 FAM161BQ96MY7 647 aa5.91□□□□□ -1.46
ERCC4-204ENST00000573018 TMEM74Q96NL1 305 aa5.91□□□□□ -1.46
ERCC4-204ENST00000573018 JMJD8Q96S16 334 aa5.91□□□□□ -1.46
ERCC4-204ENST00000573018 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.91□□□□□ -1.46
ERCC4-204ENST00000573018 AP5S1Q9NUS5 200 aa5.91□□□□□ -1.46
ERCC4-204ENST00000573018 SUSD2Q9UGT4 822 aa5.91□□□□□ -1.46
ERCC4-204ENST00000573018 ACSL6Q9UKU0 697 aa5.91□□□□□ -1.46
ERCC4-204ENST00000573018 MYRFQ9Y2G1 1151 aa5.91□□□□□ -1.46
ERCC4-204ENST00000573018 A0A1W2PQ45 241 aaPredicted RBP5.9□□□□□ -1.46
ERCC4-204ENST00000573018 A0A1W2PQY0 241 aa5.9□□□□□ -1.46
ERCC4-204ENST00000573018 ZNF827Q17R98 1081 aa5.9□□□□□ -1.46
ERCC4-204ENST00000573018 RELL1Q8IUW5 271 aa5.9□□□□□ -1.46
ERCC4-204ENST00000573018 NLGN1Q8N2Q7 840 aa5.9□□□□□ -1.46
ERCC4-204ENST00000573018 GFOD1Q9NXC2 390 aa5.9□□□□□ -1.46
ERCC4-204ENST00000573018 PALD1Q9ULE6 856 aa5.9□□□□□ -1.46
ERCC4-204ENST00000573018 PLA2G2DQ9UNK4 145 aa5.9□□□□□ -1.46
ERCC4-204ENST00000573018 HCFC2Q9Y5Z7 792 aa5.9□□□□□ -1.46
ERCC4-204ENST00000573018 IRS2Q9Y4H2 1338 aa5.9□□□□□ -1.47
ERCC4-204ENST00000573018 USP31Q70CQ4 1352 aa5.9□□□□□ -1.47
ERCC4-204ENST00000573018 PLA2G1BP04054 148 aaKnown RBP5.89□□□□□ -1.47
ERCC4-204ENST00000573018 CTSKP43235 329 aa5.89□□□□□ -1.47
ERCC4-204ENST00000573018 DAB2P98082 770 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms