RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 MYH6P13533 1939 aa22.38■■□□□ 1.17
SPNS2-203ENST00000570979 SLC10A3P09131 477 aa22.38■■□□□ 1.17
SPNS2-203ENST00000570979 CALML3P27482 149 aa22.38■■□□□ 1.17
SPNS2-203ENST00000570979 FUT2Q10981 343 aa22.38■■□□□ 1.17
SPNS2-203ENST00000570979 BEGAINQ9BUH8 593 aa22.38■■□□□ 1.17
SPNS2-203ENST00000570979 PHF20Q9BVI0 1012 aa22.38■■□□□ 1.17
SPNS2-203ENST00000570979 SH3GLB2Q9NR46 395 aa22.38■■□□□ 1.17
SPNS2-203ENST00000570979 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.38■■□□□ 1.17
SPNS2-203ENST00000570979 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.38■■□□□ 1.17
SPNS2-203ENST00000570979 MYO1BO43795 1136 aa22.37■■□□□ 1.17
SPNS2-203ENST00000570979 PRDM1O75626 825 aa22.37■■□□□ 1.17
SPNS2-203ENST00000570979 MARCKSP29966 332 aaPredicted RBP22.37■■□□□ 1.17
SPNS2-203ENST00000570979 TRAPPC10P48553 1259 aa22.37■■□□□ 1.17
SPNS2-203ENST00000570979 ZNF75DP51815 510 aa22.37■■□□□ 1.17
SPNS2-203ENST00000570979 NLRP12P59046 1061 aa22.37■■□□□ 1.17
SPNS2-203ENST00000570979 FKBP1BP68106 108 aa22.37■■□□□ 1.17
SPNS2-203ENST00000570979 PLA2G4DQ86XP0 818 aa22.37■■□□□ 1.17
SPNS2-203ENST00000570979 CCDC102AQ96A19 550 aa22.37■■□□□ 1.17
SPNS2-203ENST00000570979 MRFAP1L1Q96HT8 127 aa22.37■■□□□ 1.17
SPNS2-203ENST00000570979 TTF2Q9UNY4 1162 aaKnown RBP22.37■■□□□ 1.17
SPNS2-203ENST00000570979 WDHD1O75717 1129 aaPredicted RBP22.36■■□□□ 1.17
SPNS2-203ENST00000570979 PTPREP23469 700 aa22.36■■□□□ 1.17
SPNS2-203ENST00000570979 GUCY1A2P33402 732 aa22.36■■□□□ 1.17
SPNS2-203ENST00000570979 RASAL3Q86YV0 1011 aa22.36■■□□□ 1.17
SPNS2-203ENST00000570979 DRC7Q8IY82 874 aa22.36■■□□□ 1.17
SPNS2-203ENST00000570979 SMAP1Q8IYB5 467 aaPredicted RBP22.36■■□□□ 1.17
SPNS2-203ENST00000570979 FZD1Q9UP38 647 aa22.36■■□□□ 1.17
SPNS2-203ENST00000570979 V9GY48 417 aaPredicted RBP22.36■■□□□ 1.17
SPNS2-203ENST00000570979 TRIM75PA6NK02 468 aa22.35■■□□□ 1.17
SPNS2-203ENST00000570979 NEMFO60524 1076 aa22.35■■□□□ 1.17
SPNS2-203ENST00000570979 RBM5P52756 815 aaKnown RBP eCLIP22.35■■□□□ 1.17
SPNS2-203ENST00000570979 TFAP4Q01664 338 aa22.35■■□□□ 1.17
SPNS2-203ENST00000570979 CCDC82Q8N4S0 544 aa22.35■■□□□ 1.17
SPNS2-203ENST00000570979 PYM1Q9BRP8 204 aaKnown RBP22.35■■□□□ 1.17
SPNS2-203ENST00000570979 DEFB129Q9H1M3 183 aa22.35■■□□□ 1.17
SPNS2-203ENST00000570979 KCNH3Q9ULD8 1083 aa22.35■■□□□ 1.17
SPNS2-203ENST00000570979 KCNJ14Q9UNX9 436 aa22.35■■□□□ 1.17
SPNS2-203ENST00000570979 SRPRBQ9Y5M8 271 aaKnown RBP22.35■■□□□ 1.17
SPNS2-203ENST00000570979 PRKG1Q13976 671 aa22.35■■□□□ 1.17
SPNS2-203ENST00000570979 GALNT17Q6IS24 598 aa22.35■■□□□ 1.17
SPNS2-203ENST00000570979 SH3RF3Q8TEJ3 882 aaPredicted RBP22.35■■□□□ 1.17
SPNS2-203ENST00000570979 PIBF1Q8WXW3 757 aa22.35■■□□□ 1.17
SPNS2-203ENST00000570979 FERMT2Q96AC1 680 aa22.35■■□□□ 1.17
SPNS2-203ENST00000570979 TSPY3P0CV98 308 aa22.34■■□□□ 1.17
SPNS2-203ENST00000570979 TSPY8P0CW00 308 aa22.34■■□□□ 1.17
SPNS2-203ENST00000570979 TTLL12Q14166 644 aaPredicted RBP22.34■■□□□ 1.17
SPNS2-203ENST00000570979 PKN1Q16512 942 aa22.34■■□□□ 1.17
SPNS2-203ENST00000570979 SHC4Q6S5L8 630 aa22.34■■□□□ 1.17
SPNS2-203ENST00000570979 TUBE1Q9UJT0 475 aa22.34■■□□□ 1.17
SPNS2-203ENST00000570979 CAPN15O75808 1086 aa22.33■■□□□ 1.17
SPNS2-203ENST00000570979 VEZTQ9HBM0 779 aa22.33■■□□□ 1.17
SPNS2-203ENST00000570979 SSC5DA1L4H1 1573 aa22.33■■□□□ 1.17
SPNS2-203ENST00000570979 SCG2P13521 617 aa22.33■■□□□ 1.16
SPNS2-203ENST00000570979 BTDP43251 543 aa22.33■■□□□ 1.16
SPNS2-203ENST00000570979 PFKFB3Q16875 520 aaPredicted RBP22.33■■□□□ 1.16
SPNS2-203ENST00000570979 TEX11Q8IYF3 940 aa22.33■■□□□ 1.16
SPNS2-203ENST00000570979 CNNM3Q8NE01 707 aa22.33■■□□□ 1.16
SPNS2-203ENST00000570979 TGFBRAP1Q8WUH2 860 aa22.33■■□□□ 1.16
SPNS2-203ENST00000570979 SERPINA10Q9UK55 444 aa22.33■■□□□ 1.16
SPNS2-203ENST00000570979 GAKO14976 1311 aa22.32■■□□□ 1.16
SPNS2-203ENST00000570979 CNTNAP5Q8WYK1 1306 aa22.32■■□□□ 1.16
SPNS2-203ENST00000570979 IKBKBO14920 756 aa22.32■■□□□ 1.16
SPNS2-203ENST00000570979 CRKP46108 304 aa22.32■■□□□ 1.16
SPNS2-203ENST00000570979 TOB1P50616 345 aaPredicted RBP22.32■■□□□ 1.16
SPNS2-203ENST00000570979 FAM47AQ5JRC9 791 aa22.32■■□□□ 1.16
SPNS2-203ENST00000570979 KRBA2Q6ZNG9 492 aa22.32■■□□□ 1.16
SPNS2-203ENST00000570979 CSRNP1Q96S65 589 aa22.32■■□□□ 1.16
SPNS2-203ENST00000570979 TDRD3Q9H7E2 651 aaKnown RBP22.32■■□□□ 1.16
SPNS2-203ENST00000570979 CABP5Q9NP86 173 aa22.32■■□□□ 1.16
SPNS2-203ENST00000570979 DACH1Q9UI36 760 aa22.32■■□□□ 1.16
SPNS2-203ENST00000570979 SMARCA1P28370 1054 aa22.31■■□□□ 1.16
SPNS2-203ENST00000570979 NF2P35240 595 aa22.31■■□□□ 1.16
SPNS2-203ENST00000570979 C11orf57Q6ZUT1 292 aaPredicted RBP22.31■■□□□ 1.16
SPNS2-203ENST00000570979 PNMA1Q8ND90 353 aa22.31■■□□□ 1.16
SPNS2-203ENST00000570979 ZNF70Q9UC06 446 aaPredicted RBP22.31■■□□□ 1.16
SPNS2-203ENST00000570979 TAOK2Q9UL54 1235 aa22.31■■□□□ 1.16
SPNS2-203ENST00000570979 CASP8AP2Q9UKL3 1982 aa22.3■■□□□ 1.16
SPNS2-203ENST00000570979 AP5Z1O43299 807 aa22.3■■□□□ 1.16
SPNS2-203ENST00000570979 PLEKHA8P1O95397 391 aa22.3■■□□□ 1.16
SPNS2-203ENST00000570979 CYP2D6P10635 497 aa22.3■■□□□ 1.16
SPNS2-203ENST00000570979 GRM4Q14833 912 aa22.3■■□□□ 1.16
SPNS2-203ENST00000570979 SPDYE2Q495Y8 402 aa22.3■■□□□ 1.16
SPNS2-203ENST00000570979 CT47A1Q5JQC4 288 aaPredicted RBP22.3■■□□□ 1.16
SPNS2-203ENST00000570979 PPP4R3BQ5MIZ7 849 aa22.3■■□□□ 1.16
SPNS2-203ENST00000570979 CCDC148Q8NFR7 591 aa22.3■■□□□ 1.16
SPNS2-203ENST00000570979 FBXO2Q9UK22 296 aaPredicted RBP22.3■■□□□ 1.16
SPNS2-203ENST00000570979 NAV1Q8NEY1 1877 aa22.3■■□□□ 1.16
SPNS2-203ENST00000570979 CA12O43570 354 aa22.3■■□□□ 1.16
SPNS2-203ENST00000570979 NLRP5P59047 1200 aa22.3■■□□□ 1.16
SPNS2-203ENST00000570979 DIXDC1Q155Q3 683 aa22.3■■□□□ 1.16
SPNS2-203ENST00000570979 RCSD1Q6JBY9 416 aa22.3■■□□□ 1.16
SPNS2-203ENST00000570979 C16orf86Q6ZW13 317 aa22.3■■□□□ 1.16
SPNS2-203ENST00000570979 CMTR1Q8N1G2 835 aaKnown RBP22.3■■□□□ 1.16
SPNS2-203ENST00000570979 SRBD1Q8N5C6 995 aaKnown RBP22.3■■□□□ 1.16
SPNS2-203ENST00000570979 TRIML1Q8N9V2 468 aa22.3■■□□□ 1.16
SPNS2-203ENST00000570979 VPS54Q9P1Q0 977 aa22.3■■□□□ 1.16
SPNS2-203ENST00000570979 CLIP2Q9UDT6 1046 aa22.3■■□□□ 1.16
SPNS2-203ENST00000570979 RASA3Q14644 834 aa22.29■■□□□ 1.16
SPNS2-203ENST00000570979 NBPF12Q5TAG4 269 aaPredicted RBP22.29■■□□□ 1.16
SPNS2-203ENST00000570979 DHX40Q8IX18 779 aaKnown RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms