RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 MYO6Q9UM54 1294 aa10.08□□□□□ -0.8
HDGFL3-206ENST00000568294 COL5A2P05997 1499 aaPredicted RBP10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 F8W031 263 aaPredicted RBP10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 MARCH6O60337 910 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 CCNT1O60563 726 aaKnown RBP10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 PLEKP08567 350 aaPredicted RBP10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 KCNJ6P48051 423 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 SLC7A5Q01650 507 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 TROAPQ12815 778 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 NKX1-1Q15270 411 aaPredicted RBP10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 TYW1BQ6NUM6 668 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 SAMD1Q6SPF0 538 aaPredicted RBP10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 CYP26C1Q6V0L0 522 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 DTHD1Q6ZMT9 781 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 CERS3Q8IU89 383 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 MMS19Q96T76 1030 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 MMRN2Q9H8L6 949 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 EPN1Q9Y6I3 576 aaPredicted RBP10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 KCPQ6ZWJ8 1503 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 LOC102724428A0A0B4J2F2 783 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 TECP42680 631 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 SIK1P57059 783 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 PDE4DQ08499 809 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 CASP8Q14790 479 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 LRRC41Q15345 812 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 ALX1Q15699 326 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 APTXQ7Z2E3 356 aaKnown RBP10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 HDXQ7Z353 690 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 CLEC10AQ8IUN9 316 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 ZNF34Q8IZ26 560 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 TRIML1Q8N9V2 468 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 PANX2Q96RD6 677 aa10.07□□□□□ -0.8
HDGFL3-206ENST00000568294 TSPY3P0CV98 308 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 TSPY8P0CW00 308 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 CACNB1Q02641 598 aaPredicted RBP10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 PDE4CQ08493 712 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 TBC1D8BQ0IIM8 1120 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 TMC4Q7Z404 712 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 TXLNBQ8N3L3 684 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 CCDC148Q8NFR7 591 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 TGFBRAP1Q8WUH2 860 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 GSDMAQ96QA5 445 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 KCND1Q9NSA2 647 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 MYO5AQ9Y4I1 1855 aaKnown RBP10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 LRRIQ3A6PVS8 624 aaPredicted RBP10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 PRPF3O43395 683 aaKnown RBP10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 NDUFA10O95299 355 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 IL6STP40189 918 aaPredicted RBP10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 TXKP42681 527 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 NAPAP54920 295 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 DDB1Q16531 1140 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 BLIDQ8IZY5 108 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 PNMA1Q8ND90 353 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 JAKMIP2Q96AA8 810 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 FERMT2Q96AC1 680 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 FAM204AQ9H8W3 233 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 FRMPD2Q68DX3 1309 aaPredicted RBP10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 CNTNAP5Q8WYK1 1306 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 SIPA1L3O60292 1781 aaPredicted RBP10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 BUB1O43683 1085 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 MYO1BO43795 1136 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 EIF3JO75822 258 aaKnown RBP10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 TUBB4AP04350 444 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 SF3A3Q12874 501 aaKnown RBP eCLIP10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 TMTC1Q8IUR5 882 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 CCDC155Q8N6L0 562 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 ZNF384Q8TF68 577 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 RIOK1Q9BRS2 568 aaKnown RBP10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 CRNKL1Q9BZJ0 848 aaKnown RBP10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 LACRTQ9GZZ8 138 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 MLXIPQ9HAP2 919 aa10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 ZNHIT6Q9NWK9 470 aaKnown RBP10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 BIN2Q9UBW5 565 aaPredicted RBP10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 TTF2Q9UNY4 1162 aaKnown RBP10.06□□□□□ -0.8
HDGFL3-206ENST00000568294 FAM237AA0A1B0GTK4 181 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 CCDC151A5D8V7 595 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 NCK2O43639 380 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 IBSPP21815 317 aaPredicted RBP10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 EZH2Q15910 746 aaKnown RBP10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 TDRD12Q587J7 1177 aaKnown RBP10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 BEND6Q5SZJ8 279 aaPredicted RBP10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 USP17L2Q6R6M4 530 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 DNAAF5Q86Y56 855 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 FAM84BQ96KN1 310 aaPredicted RBP10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 CENPHQ9H3R5 247 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 DCP1AQ9NPI6 582 aaPredicted RBP10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 GTPBP6O43824 516 aaPredicted RBP10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 ATP2C1P98194 919 aaPredicted RBP10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 PICALMQ13492 652 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 STIM1Q13586 685 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 CDKAL1Q5VV42 579 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 TAF3Q5VWG9 929 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 ZNF579Q8NAF0 562 aaKnown RBP10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 CRACR2AQ9BSW2 395 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 NOC4LQ9BVI4 516 aaKnown RBP10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 NLRC4Q9NPP4 1024 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 EXOC1Q9NV70 894 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 TMEM51Q9NW97 253 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 MINPP1Q9UNW1 487 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms