RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 MOV10L1Q9BXT6 1211 aaKnown RBP15.92■□□□□ 0.14
SHMT2-228ENST00000557302 PTCH2Q9Y6C5 1203 aa15.92■□□□□ 0.14
SHMT2-228ENST00000557302 A0A0G2JMZ2 1700 aa15.91■□□□□ 0.14
SHMT2-228ENST00000557302 EIF5BO60841 1220 aaKnown RBP15.91■□□□□ 0.14
SHMT2-228ENST00000557302 FDX1P10109 184 aa15.91■□□□□ 0.14
SHMT2-228ENST00000557302 ZNF543Q08ER8 600 aa15.91■□□□□ 0.14
SHMT2-228ENST00000557302 GPR142Q7Z601 462 aa15.91■□□□□ 0.14
SHMT2-228ENST00000557302 PLEKHH3Q7Z736 793 aa15.91■□□□□ 0.14
SHMT2-228ENST00000557302 SHCBP1Q8NEM2 672 aa15.91■□□□□ 0.14
SHMT2-228ENST00000557302 REPS2Q8NFH8 660 aa15.91■□□□□ 0.14
SHMT2-228ENST00000557302 RAET1EQ8TD07 263 aa15.91■□□□□ 0.14
SHMT2-228ENST00000557302 KCNB2Q92953 911 aa15.91■□□□□ 0.14
SHMT2-228ENST00000557302 SLC38A10Q9HBR0 1119 aa15.91■□□□□ 0.14
SHMT2-228ENST00000557302 GPCPD1Q9NPB8 672 aa15.91■□□□□ 0.14
SHMT2-228ENST00000557302 HTTP42858 3142 aa15.91■□□□□ 0.14
SHMT2-228ENST00000557302 FRMPD2Q68DX3 1309 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-228ENST00000557302 PARP14Q460N5 1801 aa15.9■□□□□ 0.14
SHMT2-228ENST00000557302 SLC25A27O95847 323 aa15.9■□□□□ 0.14
SHMT2-228ENST00000557302 STAT3P40763 770 aa15.9■□□□□ 0.14
SHMT2-228ENST00000557302 FLT3LGP49771 235 aa15.9■□□□□ 0.14
SHMT2-228ENST00000557302 GPATCH4Q5T3I0 446 aaKnown RBP15.9■□□□□ 0.14
SHMT2-228ENST00000557302 TTBK2Q6IQ55 1244 aa15.9■□□□□ 0.14
SHMT2-228ENST00000557302 BTNL9Q6UXG8 535 aa15.9■□□□□ 0.14
SHMT2-228ENST00000557302 RIOX2Q8IUF8 465 aa15.9■□□□□ 0.14
SHMT2-228ENST00000557302 IGDCC4Q8TDY8 1250 aa15.9■□□□□ 0.14
SHMT2-228ENST00000557302 TMEM87BQ96K49 555 aa15.9■□□□□ 0.14
SHMT2-228ENST00000557302 TEX13BQ9BXU2 312 aa15.9■□□□□ 0.14
SHMT2-228ENST00000557302 USP26Q9BXU7 913 aa15.9■□□□□ 0.14
SHMT2-228ENST00000557302 MROH8Q9H579 483 aa15.9■□□□□ 0.14
SHMT2-228ENST00000557302 ZNF214Q9UL59 606 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-228ENST00000557302 GABRQQ9UN88 632 aa15.9■□□□□ 0.14
SHMT2-228ENST00000557302 HPS5Q9UPZ3 1129 aa15.9■□□□□ 0.14
SHMT2-228ENST00000557302 GTF3C3Q9Y5Q9 886 aa15.9■□□□□ 0.14
SHMT2-228ENST00000557302 IVNS1ABPQ9Y6Y0 642 aa15.9■□□□□ 0.14
SHMT2-228ENST00000557302 ATP2A1O14983 1001 aa15.89■□□□□ 0.13
SHMT2-228ENST00000557302 HMGB1P09429 215 aaKnown RBP15.89■□□□□ 0.13
SHMT2-228ENST00000557302 ERCC3P19447 782 aa15.89■□□□□ 0.13
SHMT2-228ENST00000557302 COPB2P35606 906 aa15.89■□□□□ 0.13
SHMT2-228ENST00000557302 SLC16A2P36021 539 aa15.89■□□□□ 0.13
SHMT2-228ENST00000557302 OAZ1P54368 228 aa15.89■□□□□ 0.13
SHMT2-228ENST00000557302 ADCK5Q3MIX3 580 aa15.89■□□□□ 0.13
SHMT2-228ENST00000557302 ASPRV1Q53RT3 343 aa15.89■□□□□ 0.13
SHMT2-228ENST00000557302 SYDE2Q5VT97 1194 aa15.89■□□□□ 0.13
SHMT2-228ENST00000557302 SNRNP48Q6IEG0 339 aaKnown RBP15.89■□□□□ 0.13
SHMT2-228ENST00000557302 NCAPG2Q86XI2 1143 aa15.89■□□□□ 0.13
SHMT2-228ENST00000557302 CPXCR1Q8N123 301 aa15.89■□□□□ 0.13
SHMT2-228ENST00000557302 SOCS4Q8WXH5 440 aa15.89■□□□□ 0.13
SHMT2-228ENST00000557302 NUDT12Q9BQG2 462 aa15.89■□□□□ 0.13
SHMT2-228ENST00000557302 SENP2Q9HC62 589 aa15.89■□□□□ 0.13
SHMT2-228ENST00000557302 PRR12Q9ULL5 1215 aa15.89■□□□□ 0.13
SHMT2-228ENST00000557302 SNX14Q9Y5W7 946 aa15.89■□□□□ 0.13
SHMT2-228ENST00000557302 WDR19Q8NEZ3 1342 aa15.89■□□□□ 0.13
SHMT2-228ENST00000557302 MGAMO43451 1857 aa15.88■□□□□ 0.13
SHMT2-228ENST00000557302 SH2B2O14492 632 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-228ENST00000557302 PARP1P09874 1014 aaKnown RBP15.88■□□□□ 0.13
SHMT2-228ENST00000557302 GOLGA8HP0CJ92 632 aa15.88■□□□□ 0.13
SHMT2-228ENST00000557302 IRF5Q13568 498 aa15.88■□□□□ 0.13
SHMT2-228ENST00000557302 COL9A3Q14050 684 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-228ENST00000557302 SLC9C1Q4G0N8 1177 aa15.88■□□□□ 0.13
SHMT2-228ENST00000557302 DHX32Q7L7V1 743 aaKnown RBP15.88■□□□□ 0.13
SHMT2-228ENST00000557302 CATIPQ7Z7H3 387 aa15.88■□□□□ 0.13
SHMT2-228ENST00000557302 TMTC2Q8N394 836 aa15.88■□□□□ 0.13
SHMT2-228ENST00000557302 JAKMIP1Q96N16 626 aaKnown RBP15.88■□□□□ 0.13
SHMT2-228ENST00000557302 LY9Q9HBG7 655 aa15.88■□□□□ 0.13
SHMT2-228ENST00000557302 RAVER2Q9HCJ3 691 aaKnown RBP15.88■□□□□ 0.13
SHMT2-228ENST00000557302 GPHNQ9NQX3 736 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-228ENST00000557302 GJD2Q9UKL4 321 aa15.88■□□□□ 0.13
SHMT2-228ENST00000557302 TNRC18O15417 2968 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-228ENST00000557302 SLC15A5A6NIM6 579 aa15.87■□□□□ 0.13
SHMT2-228ENST00000557302 STRNO43815 780 aa15.87■□□□□ 0.13
SHMT2-228ENST00000557302 PTPREP23469 700 aa15.87■□□□□ 0.13
SHMT2-228ENST00000557302 LIFRP42702 1097 aa15.87■□□□□ 0.13
SHMT2-228ENST00000557302 SLC4A3P48751 1232 aa15.87■□□□□ 0.13
SHMT2-228ENST00000557302 MORN1Q5T089 497 aa15.87■□□□□ 0.13
SHMT2-228ENST00000557302 NFXL1Q6ZNB6 911 aa15.87■□□□□ 0.13
SHMT2-228ENST00000557302 LRRC2Q9BYS8 371 aa15.87■□□□□ 0.13
SHMT2-228ENST00000557302 CCDC69A6NI79 296 aa15.86■□□□□ 0.13
SHMT2-228ENST00000557302 CYP2B6P20813 491 aa15.86■□□□□ 0.13
SHMT2-228ENST00000557302 PSMA5P28066 241 aa15.86■□□□□ 0.13
SHMT2-228ENST00000557302 GRK4P32298 578 aa15.86■□□□□ 0.13
SHMT2-228ENST00000557302 RGS2P41220 211 aa15.86■□□□□ 0.13
SHMT2-228ENST00000557302 EXOSC10Q01780 885 aaKnown RBP15.86■□□□□ 0.13
SHMT2-228ENST00000557302 GRB14Q14449 540 aa15.86■□□□□ 0.13
SHMT2-228ENST00000557302 CCDC174Q6PII3 467 aa15.86■□□□□ 0.13
SHMT2-228ENST00000557302 NBPF11Q86T75 865 aa15.86■□□□□ 0.13
SHMT2-228ENST00000557302 SLAIN1Q8ND83 568 aa15.86■□□□□ 0.13
SHMT2-228ENST00000557302 RANBP17Q9H2T7 1088 aaKnown RBP15.86■□□□□ 0.13
SHMT2-228ENST00000557302 ADCY3O60266 1144 aa15.85■□□□□ 0.13
SHMT2-228ENST00000557302 DDAH1O94760 285 aa15.85■□□□□ 0.13
SHMT2-228ENST00000557302 FCER1AP12319 257 aa15.85■□□□□ 0.13
SHMT2-228ENST00000557302 SNAP25P60880 206 aa15.85■□□□□ 0.13
SHMT2-228ENST00000557302 TROAPQ12815 778 aa15.85■□□□□ 0.13
SHMT2-228ENST00000557302 MAP2K5Q13163 448 aa15.85■□□□□ 0.13
SHMT2-228ENST00000557302 GRM4Q14833 912 aa15.85■□□□□ 0.13
SHMT2-228ENST00000557302 BLOC1S2Q6QNY1 142 aa15.85■□□□□ 0.13
SHMT2-228ENST00000557302 ZNF654Q8IZM8 581 aa15.85■□□□□ 0.13
SHMT2-228ENST00000557302 ABRAQ8N0Z2 381 aa15.85■□□□□ 0.13
SHMT2-228ENST00000557302 PXYLP1Q8TE99 480 aa15.85■□□□□ 0.13
SHMT2-228ENST00000557302 SH3TC2Q8TF17 1288 aa15.85■□□□□ 0.13
SHMT2-228ENST00000557302 NUP133Q8WUM0 1156 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms