RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 TNFRSF10DQ9UBN6 386 aa6.66□□□□□ -1.34
SCFD1-218ENST00000556256 IVNS1ABPQ9Y6Y0 642 aa6.66□□□□□ -1.34
SCFD1-218ENST00000556256 WTIPA6NIX2 430 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-218ENST00000556256 BUB1BO60566 1050 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-218ENST00000556256 INSRRP14616 1297 aa6.65□□□□□ -1.34
SCFD1-218ENST00000556256 ST13P50502 369 aaKnown RBP6.65□□□□□ -1.34
SCFD1-218ENST00000556256 SNW1Q13573 536 aaKnown RBP6.65□□□□□ -1.34
SCFD1-218ENST00000556256 RAB3GAP1Q15042 981 aa6.65□□□□□ -1.34
SCFD1-218ENST00000556256 HSF5Q4G112 596 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-218ENST00000556256 FFAR3O14843 346 aa6.64□□□□□ -1.35
SCFD1-218ENST00000556256 ARL4AP40617 200 aa6.64□□□□□ -1.35
SCFD1-218ENST00000556256 RNF4P78317 190 aa6.64□□□□□ -1.35
SCFD1-218ENST00000556256 LAPTM5Q13571 262 aa6.64□□□□□ -1.35
SCFD1-218ENST00000556256 RTP5Q14D33 572 aa6.64□□□□□ -1.35
SCFD1-218ENST00000556256 NBPF12Q5TAG4 269 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-218ENST00000556256 GPR55Q9Y2T6 319 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-218ENST00000556256 TAF6LQ9Y6J9 622 aa6.64□□□□□ -1.35
SCFD1-218ENST00000556256 NUDT19A8MXV4 375 aa6.63□□□□□ -1.35
SCFD1-218ENST00000556256 PRAMEF1O95521 474 aa6.63□□□□□ -1.35
SCFD1-218ENST00000556256 PRKCAP17252 672 aa6.63□□□□□ -1.35
SCFD1-218ENST00000556256 CYP4F8P98187 520 aa6.63□□□□□ -1.35
SCFD1-218ENST00000556256 TMEM62Q0P6H9 643 aa6.63□□□□□ -1.35
SCFD1-218ENST00000556256 PUM1Q14671 1186 aaKnown RBP eCLIP6.63□□□□□ -1.35
SCFD1-218ENST00000556256 CBX2Q14781 532 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-218ENST00000556256 USP31Q70CQ4 1352 aa6.63□□□□□ -1.35
SCFD1-218ENST00000556256 FCRL2Q96LA5 508 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-218ENST00000556256 MINPP1Q9UNW1 487 aa6.63□□□□□ -1.35
SCFD1-218ENST00000556256 IRS2Q9Y4H2 1338 aa6.62□□□□□ -1.35
SCFD1-218ENST00000556256 CTSHP09668 335 aa6.62□□□□□ -1.35
SCFD1-218ENST00000556256 KCNC1P48547 511 aa6.62□□□□□ -1.35
SCFD1-218ENST00000556256 SLURP1P55000 103 aa6.62□□□□□ -1.35
SCFD1-218ENST00000556256 ARSHQ5FYA8 562 aa6.62□□□□□ -1.35
SCFD1-218ENST00000556256 HHIPL2Q6UWX4 724 aa6.62□□□□□ -1.35
SCFD1-218ENST00000556256 RHOVQ96L33 236 aa6.62□□□□□ -1.35
SCFD1-218ENST00000556256 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.62□□□□□ -1.35
SCFD1-218ENST00000556256 IGFBP6P24592 240 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-218ENST00000556256 CEBPAP49715 358 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-218ENST00000556256 ZFYVE27Q5T4F4 411 aa6.61□□□□□ -1.35
SCFD1-218ENST00000556256 RPTNQ6XPR3 784 aa6.61□□□□□ -1.35
SCFD1-218ENST00000556256 SLCO6A1Q86UG4 719 aa6.61□□□□□ -1.35
SCFD1-218ENST00000556256 FBXO27Q8NI29 283 aa6.61□□□□□ -1.35
SCFD1-218ENST00000556256 TMEM74Q96NL1 305 aa6.61□□□□□ -1.35
SCFD1-218ENST00000556256 PRDM14Q9GZV8 571 aa6.61□□□□□ -1.35
SCFD1-218ENST00000556256 TNFRSF12AQ9NP84 129 aa6.61□□□□□ -1.35
SCFD1-218ENST00000556256 PARP2Q9UGN5 583 aa6.61□□□□□ -1.35
SCFD1-218ENST00000556256 ACSL6Q9UKU0 697 aa6.61□□□□□ -1.35
SCFD1-218ENST00000556256 SIGLEC6O43699 453 aa6.6□□□□□ -1.35
SCFD1-218ENST00000556256 RAG1P15918 1043 aa6.6□□□□□ -1.35
SCFD1-218ENST00000556256 GBP2P32456 591 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-218ENST00000556256 LIMS1P48059 325 aa6.6□□□□□ -1.35
SCFD1-218ENST00000556256 CAP1Q01518 475 aa6.6□□□□□ -1.35
SCFD1-218ENST00000556256 FAM160A1Q05DH4 1040 aa6.6□□□□□ -1.35
SCFD1-218ENST00000556256 REC114Q7Z4M0 266 aa6.6□□□□□ -1.35
SCFD1-218ENST00000556256 ERVK13-1Q9NX77 482 aa6.6□□□□□ -1.35
SCFD1-218ENST00000556256 MYRFQ9Y2G1 1151 aa6.6□□□□□ -1.35
SCFD1-218ENST00000556256 A0A1W2PQ45 241 aaPredicted RBP6.59□□□□□ -1.35
SCFD1-218ENST00000556256 A0A1W2PQY0 241 aa6.59□□□□□ -1.35
SCFD1-218ENST00000556256 DAB2P98082 770 aa6.59□□□□□ -1.35
SCFD1-218ENST00000556256 PSMD2Q13200 908 aa6.59□□□□□ -1.35
SCFD1-218ENST00000556256 MLECQ14165 292 aa6.59□□□□□ -1.35
SCFD1-218ENST00000556256 MPP2Q14168 576 aa6.59□□□□□ -1.35
SCFD1-218ENST00000556256 EAPPQ56P03 285 aaPredicted RBP6.59□□□□□ -1.35
SCFD1-218ENST00000556256 RELL1Q8IUW5 271 aa6.59□□□□□ -1.35
SCFD1-218ENST00000556256 NLGN1Q8N2Q7 840 aa6.59□□□□□ -1.35
SCFD1-218ENST00000556256 GOLM1Q8NBJ4 401 aa6.59□□□□□ -1.35
SCFD1-218ENST00000556256 NUP43Q8NFH3 380 aa6.59□□□□□ -1.35
SCFD1-218ENST00000556256 GPR20Q99678 358 aa6.59□□□□□ -1.35
SCFD1-218ENST00000556256 RSRP1Q9BUV0 290 aa6.59□□□□□ -1.35
SCFD1-218ENST00000556256 POLR2BP30876 1174 aaKnown RBP6.58□□□□□ -1.36
SCFD1-218ENST00000556256 PLEKHN1Q494U1 663 aaPredicted RBP6.58□□□□□ -1.36
SCFD1-218ENST00000556256 UBXN11Q5T124 520 aa6.58□□□□□ -1.36
SCFD1-218ENST00000556256 ADGRG2Q8IZP9 1017 aa6.58□□□□□ -1.36
SCFD1-218ENST00000556256 TMEM52Q8NDY8 209 aa6.58□□□□□ -1.36
SCFD1-218ENST00000556256 CDADC1Q9BWV3 514 aa6.58□□□□□ -1.36
SCFD1-218ENST00000556256 CHST7Q9NS84 486 aa6.58□□□□□ -1.36
SCFD1-218ENST00000556256 MINDY4BA8MYZ0 360 aa6.57□□□□□ -1.36
SCFD1-218ENST00000556256 K7ESM1 405 aa6.57□□□□□ -1.36
SCFD1-218ENST00000556256 MEIS1O00470 390 aa6.57□□□□□ -1.36
SCFD1-218ENST00000556256 MAPKAPK2P49137 400 aa6.57□□□□□ -1.36
SCFD1-218ENST00000556256 ZNF200P98182 395 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-218ENST00000556256 RAD51AP2Q09MP3 1159 aa6.57□□□□□ -1.36
SCFD1-218ENST00000556256 SNAP47Q5SQN1 464 aa6.57□□□□□ -1.36
SCFD1-218ENST00000556256 FERMT3Q86UX7 667 aa6.57□□□□□ -1.36
SCFD1-218ENST00000556256 ZNF512BQ96KM6 892 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-218ENST00000556256 JMJD8Q96S16 334 aa6.57□□□□□ -1.36
SCFD1-218ENST00000556256 GMIPQ9P107 970 aa6.57□□□□□ -1.36
SCFD1-218ENST00000556256 IMPACTQ9P2X3 320 aa6.57□□□□□ -1.36
SCFD1-218ENST00000556256 CNOT11Q9UKZ1 510 aaKnown RBP6.57□□□□□ -1.36
SCFD1-218ENST00000556256 A0A1B0GTL3 188 aa6.56□□□□□ -1.36
SCFD1-218ENST00000556256 TLR3O15455 904 aaKnown RBP6.56□□□□□ -1.36
SCFD1-218ENST00000556256 ZNF205O95201 554 aa6.56□□□□□ -1.36
SCFD1-218ENST00000556256 PFKLP17858 780 aa6.56□□□□□ -1.36
SCFD1-218ENST00000556256 ENDOUP21128 410 aaKnown RBP6.56□□□□□ -1.36
SCFD1-218ENST00000556256 GARTP22102 1010 aa6.56□□□□□ -1.36
SCFD1-218ENST00000556256 BMP8BP34820 402 aa6.56□□□□□ -1.36
SCFD1-218ENST00000556256 CTSKP43235 329 aa6.56□□□□□ -1.36
SCFD1-218ENST00000556256 NR1I3Q14994 352 aa6.56□□□□□ -1.36
SCFD1-218ENST00000556256 VWA3BQ502W6 1294 aa6.56□□□□□ -1.36
SCFD1-218ENST00000556256 ZC3H14Q6PJT7 736 aaKnown RBP6.56□□□□□ -1.36
SCFD1-218ENST00000556256 FAM196AQ6ZSG2 479 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms