RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 ADGRA2Q96PE1 1338 aa12.4□□□□□ -0.42
TMEM260-206ENST00000555046 NCOR1O75376 2440 aa12.4□□□□□ -0.42
TMEM260-206ENST00000555046 SLC25A27O95847 323 aa12.4□□□□□ -0.42
TMEM260-206ENST00000555046 STAT2P52630 851 aa12.4□□□□□ -0.42
TMEM260-206ENST00000555046 ERVK-9P63128 1117 aa12.4□□□□□ -0.42
TMEM260-206ENST00000555046 ERVK-24P63145 666 aa12.4□□□□□ -0.42
TMEM260-206ENST00000555046 WTAPQ15007 396 aa12.4□□□□□ -0.42
TMEM260-206ENST00000555046 KIAA1755Q5JYT7 1200 aa12.4□□□□□ -0.42
TMEM260-206ENST00000555046 GPR153Q6NV75 609 aa12.4□□□□□ -0.42
TMEM260-206ENST00000555046 DHX32Q7L7V1 743 aaKnown RBP12.4□□□□□ -0.42
TMEM260-206ENST00000555046 CATIPQ7Z7H3 387 aa12.4□□□□□ -0.42
TMEM260-206ENST00000555046 PNMA1Q8ND90 353 aa12.4□□□□□ -0.42
TMEM260-206ENST00000555046 ZKSCAN3Q9BRR0 538 aa12.4□□□□□ -0.42
TMEM260-206ENST00000555046 USP26Q9BXU7 913 aa12.4□□□□□ -0.42
TMEM260-206ENST00000555046 MTMR10Q9NXD2 777 aa12.4□□□□□ -0.42
TMEM260-206ENST00000555046 ADAMTS5Q9UNA0 930 aa12.4□□□□□ -0.42
TMEM260-206ENST00000555046 NAV1Q8NEY1 1877 aa12.4□□□□□ -0.42
TMEM260-206ENST00000555046 SPDYE16A6NNV3 312 aaPredicted RBP12.39□□□□□ -0.43
TMEM260-206ENST00000555046 TMEM232C9JQI7 657 aa12.39□□□□□ -0.43
TMEM260-206ENST00000555046 VWA5AO00534 786 aa12.39□□□□□ -0.43
TMEM260-206ENST00000555046 TNPO2O14787 897 aaKnown RBP12.39□□□□□ -0.43
TMEM260-206ENST00000555046 STRNO43815 780 aa12.39□□□□□ -0.43
TMEM260-206ENST00000555046 CCDC96Q2M329 555 aa12.39□□□□□ -0.43
TMEM260-206ENST00000555046 TMEM67Q5HYA8 995 aa12.39□□□□□ -0.43
TMEM260-206ENST00000555046 SYNE3Q6ZMZ3 975 aa12.39□□□□□ -0.43
TMEM260-206ENST00000555046 ENAHQ8N8S7 591 aaPredicted RBP12.39□□□□□ -0.43
TMEM260-206ENST00000555046 CD99L2Q8TCZ2 262 aa12.39□□□□□ -0.43
TMEM260-206ENST00000555046 KCNB2Q92953 911 aa12.39□□□□□ -0.43
TMEM260-206ENST00000555046 PAGR1Q9BTK6 254 aa12.39□□□□□ -0.43
TMEM260-206ENST00000555046 MROH8Q9H579 483 aa12.39□□□□□ -0.43
TMEM260-206ENST00000555046 IVNS1ABPQ9Y6Y0 642 aa12.39□□□□□ -0.43
TMEM260-206ENST00000555046 WDR19Q8NEZ3 1342 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 DOCK1Q14185 1865 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 DDX60LQ5H9U9 1706 aaKnown RBP12.38□□□□□ -0.43
TMEM260-206ENST00000555046 PRC1O43663 620 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 PARP1P09874 1014 aaKnown RBP12.38□□□□□ -0.43
TMEM260-206ENST00000555046 CALM1P0DP23 149 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 CALM2P0DP24 149 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 CALM3P0DP25 149 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 STAT3P40763 770 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 LIFRP42702 1097 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 OAZ1P54368 228 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 FGD1P98174 961 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 PLS1Q14651 629 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 ASPRV1Q53RT3 343 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 SAMD1Q6SPF0 538 aaPredicted RBP12.38□□□□□ -0.43
TMEM260-206ENST00000555046 NFXL1Q6ZNB6 911 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 CYB5R4Q7L1T6 521 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 NBPF11Q86T75 865 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 MB21D2Q8IYB1 491 aaPredicted RBP12.38□□□□□ -0.43
TMEM260-206ENST00000555046 SHCBP1Q8NEM2 672 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 IGDCC4Q8TDY8 1250 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 DPF3Q92784 378 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 KIFC2Q96AC6 838 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 SPATC1LQ9H0A9 340 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 SLC5A4Q9NY91 659 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 BAZ2AQ9UIF9 1905 aaKnown RBP12.38□□□□□ -0.43
TMEM260-206ENST00000555046 CDK5RAP2Q96SN8 1893 aa12.38□□□□□ -0.43
TMEM260-206ENST00000555046 SIPA1L1O43166 1804 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 ALPK3Q96L96 1907 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 CCDC69A6NI79 296 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 ATP2A1O14983 1001 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 SNHG28P0DPA3 235 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 PDHBP11177 359 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 KIF5BP33176 963 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 GNAQP50148 359 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 CAP1Q01518 475 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 ZNF543Q08ER8 600 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 TRAF1Q13077 416 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 SEC23AQ15436 765 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 Q3C1V9 767 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 BLOC1S2Q6QNY1 142 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 BTNL9Q6UXG8 535 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 PLEKHH3Q7Z736 793 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 TRMT44Q8IYL2 757 aaKnown RBP12.37□□□□□ -0.43
TMEM260-206ENST00000555046 RAET1EQ8TD07 263 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 SOCS4Q8WXH5 440 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 ATG4CQ96DT6 458 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 MAP3K14Q99558 947 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 NUP88Q99567 741 aaPredicted RBP12.37□□□□□ -0.43
TMEM260-206ENST00000555046 NUDT12Q9BQG2 462 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 SRRDQ9UH36 339 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 MTMR7Q9Y216 660 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 OTOFQ9HC10 1997 aa12.37□□□□□ -0.43
TMEM260-206ENST00000555046 ANAPC15P60006 121 aa12.36□□□□□ -0.43
TMEM260-206ENST00000555046 EXOSC10Q01780 885 aaKnown RBP12.36□□□□□ -0.43
TMEM260-206ENST00000555046 TKFCQ3LXA3 575 aa12.36□□□□□ -0.43
TMEM260-206ENST00000555046 WDR78Q5VTH9 848 aa12.36□□□□□ -0.43
TMEM260-206ENST00000555046 STOX1Q6ZVD7 989 aa12.36□□□□□ -0.43
TMEM260-206ENST00000555046 KCTD1Q719H9 257 aa12.36□□□□□ -0.43
TMEM260-206ENST00000555046 RASEFQ8IZ41 740 aa12.36□□□□□ -0.43
TMEM260-206ENST00000555046 ABRAQ8N0Z2 381 aa12.36□□□□□ -0.43
TMEM260-206ENST00000555046 SHISA4Q96DD7 197 aa12.36□□□□□ -0.43
TMEM260-206ENST00000555046 SNX27Q96L92 541 aa12.36□□□□□ -0.43
TMEM260-206ENST00000555046 TRIM47Q96LD4 638 aa12.36□□□□□ -0.43
TMEM260-206ENST00000555046 LZTS2Q9BRK4 669 aa12.36□□□□□ -0.43
TMEM260-206ENST00000555046 TEX13BQ9BXU2 312 aa12.36□□□□□ -0.43
TMEM260-206ENST00000555046 SLC38A10Q9HBR0 1119 aa12.36□□□□□ -0.43
TMEM260-206ENST00000555046 TXNRD2Q9NNW7 524 aa12.36□□□□□ -0.43
TMEM260-206ENST00000555046 FBXO28Q9NVF7 368 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms