RNA–Protein interactions for RNA: ENST00000547356.1

SMARCC2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 741 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-204ENST00000547356 DEFB118Q96PH6 123 aa27.54■■■□□ 2
SMARCC2-204ENST00000547356 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.54■■■□□ 2
SMARCC2-204ENST00000547356 RAVER2Q9HCJ3 691 aaKnown RBP27.54■■■□□ 2
SMARCC2-204ENST00000547356 RIPK3Q9Y572 518 aa27.54■■■□□ 2
SMARCC2-204ENST00000547356 TAF6LQ9Y6J9 622 aa27.54■■■□□ 2
SMARCC2-204ENST00000547356 PRKAR2AP13861 404 aaKnown RBP27.53■■■□□ 2
SMARCC2-204ENST00000547356 GJA8P48165 433 aa27.53■■■□□ 2
SMARCC2-204ENST00000547356 IKQ13123 557 aaPredicted RBP27.53■■■□□ 2
SMARCC2-204ENST00000547356 CCDC96Q2M329 555 aa27.53■■■□□ 2
SMARCC2-204ENST00000547356 SNRNP48Q6IEG0 339 aaKnown RBP27.53■■■□□ 2
SMARCC2-204ENST00000547356 PAK6Q9NQU5 681 aaPredicted RBP27.53■■■□□ 2
SMARCC2-204ENST00000547356 ZBED4O75132 1171 aa27.52■■■□□ 2
SMARCC2-204ENST00000547356 SLC25A27O95847 323 aa27.52■■■□□ 2
SMARCC2-204ENST00000547356 STAT2P52630 851 aa27.52■■■□□ 2
SMARCC2-204ENST00000547356 SNAP25P60880 206 aa27.52■■■□□ 2
SMARCC2-204ENST00000547356 CACNB2Q08289 660 aaPredicted RBP27.52■■■□□ 2
SMARCC2-204ENST00000547356 SLC38A10Q9HBR0 1119 aa27.52■■■□□ 2
SMARCC2-204ENST00000547356 ZNF236Q9UL36 1845 aa27.51■■□□□ 1.99
SMARCC2-204ENST00000547356 FRMPD2Q68DX3 1309 aaPredicted RBP27.51■■□□□ 1.99
SMARCC2-204ENST00000547356 HOXC6P09630 235 aa27.51■■□□□ 1.99
SMARCC2-204ENST00000547356 MAP3K21Q5TCX8 1036 aa27.51■■□□□ 1.99
SMARCC2-204ENST00000547356 TTBK2Q6IQ55 1244 aa27.51■■□□□ 1.99
SMARCC2-204ENST00000547356 DPP9Q86TI2 863 aa27.51■■□□□ 1.99
SMARCC2-204ENST00000547356 TEX13BQ9BXU2 312 aa27.51■■□□□ 1.99
SMARCC2-204ENST00000547356 ZSWIM5Q9P217 1185 aa27.51■■□□□ 1.99
SMARCC2-204ENST00000547356 CTDP1Q9Y5B0 961 aaPredicted RBP27.51■■□□□ 1.99
SMARCC2-204ENST00000547356 RPTORQ8N122 1335 aa27.5■■□□□ 1.99
SMARCC2-204ENST00000547356 STRNO43815 780 aa27.5■■□□□ 1.99
SMARCC2-204ENST00000547356 SGPL1O95470 568 aa27.5■■□□□ 1.99
SMARCC2-204ENST00000547356 CYP21A2P08686 494 aa27.5■■□□□ 1.99
SMARCC2-204ENST00000547356 BMP2KLQ5H9B9 411 aa27.5■■□□□ 1.99
SMARCC2-204ENST00000547356 TRMT44Q8IYL2 757 aaKnown RBP27.5■■□□□ 1.99
SMARCC2-204ENST00000547356 DCAF4Q8WV16 495 aa27.5■■□□□ 1.99
SMARCC2-204ENST00000547356 MMP19Q99542 508 aa27.5■■□□□ 1.99
SMARCC2-204ENST00000547356 HMX1Q9NP08 348 aaPredicted RBP27.5■■□□□ 1.99
SMARCC2-204ENST00000547356 U3KPZ7 1027 aaPredicted RBP27.5■■□□□ 1.99
SMARCC2-204ENST00000547356 PGK2P07205 417 aa27.49■■□□□ 1.99
SMARCC2-204ENST00000547356 FCER1AP12319 257 aa27.49■■□□□ 1.99
SMARCC2-204ENST00000547356 CCND3P30281 292 aaPredicted RBP27.49■■□□□ 1.99
SMARCC2-204ENST00000547356 CYP2C19P33261 490 aa27.49■■□□□ 1.99
SMARCC2-204ENST00000547356 SLC16A2P36021 539 aa27.49■■□□□ 1.99
SMARCC2-204ENST00000547356 FAM160B2Q86V87 743 aa27.49■■□□□ 1.99
SMARCC2-204ENST00000547356 CHURC1Q8WUH1 139 aa27.49■■□□□ 1.99
SMARCC2-204ENST00000547356 ESYT1Q9BSJ8 1104 aa27.49■■□□□ 1.99
SMARCC2-204ENST00000547356 GPCPD1Q9NPB8 672 aa27.49■■□□□ 1.99
SMARCC2-204ENST00000547356 TAL1P17542 331 aaPredicted RBP27.48■■□□□ 1.99
SMARCC2-204ENST00000547356 TTC14Q96N46 770 aa27.48■■□□□ 1.99
SMARCC2-204ENST00000547356 PRR12Q9ULL5 1215 aa27.48■■□□□ 1.99
SMARCC2-204ENST00000547356 ATP2A1O14983 1001 aa27.47■■□□□ 1.99
SMARCC2-204ENST00000547356 PDHBP11177 359 aa27.47■■□□□ 1.99
SMARCC2-204ENST00000547356 CYB5R4Q7L1T6 521 aa27.47■■□□□ 1.99
SMARCC2-204ENST00000547356 IQCA1Q86XH1 822 aa27.47■■□□□ 1.99
SMARCC2-204ENST00000547356 ABRAQ8N0Z2 381 aa27.47■■□□□ 1.99
SMARCC2-204ENST00000547356 ZSCAN10Q96SZ4 725 aaPredicted RBP27.47■■□□□ 1.99
SMARCC2-204ENST00000547356 KRT23Q9C075 422 aa27.47■■□□□ 1.99
SMARCC2-204ENST00000547356 RBM8AQ9Y5S9 174 aaKnown RBP27.47■■□□□ 1.99
SMARCC2-204ENST00000547356 ZNF536O15090 1300 aa27.46■■□□□ 1.99
SMARCC2-204ENST00000547356 TFRCP02786 760 aaKnown RBP27.46■■□□□ 1.99
SMARCC2-204ENST00000547356 MFSD14CQ5VZR4 134 aa27.46■■□□□ 1.99
SMARCC2-204ENST00000547356 CCDC174Q6PII3 467 aa27.46■■□□□ 1.99
SMARCC2-204ENST00000547356 STOX1Q6ZVD7 989 aa27.46■■□□□ 1.99
SMARCC2-204ENST00000547356 ENAHQ8N8S7 591 aaPredicted RBP27.46■■□□□ 1.99
SMARCC2-204ENST00000547356 MAP4K1Q92918 833 aa27.46■■□□□ 1.99
SMARCC2-204ENST00000547356 AGBL1Q96MI9 1066 aa27.46■■□□□ 1.99
SMARCC2-204ENST00000547356 LSG1Q9H089 658 aaKnown RBP27.46■■□□□ 1.99
SMARCC2-204ENST00000547356 CNNM2Q9H8M5 875 aa27.46■■□□□ 1.99
SMARCC2-204ENST00000547356 HOMER2Q9NSB8 354 aa27.46■■□□□ 1.99
SMARCC2-204ENST00000547356 TNRC18O15417 2968 aaPredicted RBP27.46■■□□□ 1.99
SMARCC2-204ENST00000547356 TNKSO95271 1327 aa27.45■■□□□ 1.99
SMARCC2-204ENST00000547356 PLA2G6O60733 806 aa27.45■■□□□ 1.98
SMARCC2-204ENST00000547356 IGHA2P01877 340 aa27.45■■□□□ 1.98
SMARCC2-204ENST00000547356 COPB2P35606 906 aa27.45■■□□□ 1.98
SMARCC2-204ENST00000547356 KCTD2Q14681 263 aa27.45■■□□□ 1.98
SMARCC2-204ENST00000547356 DGKHQ86XP1 1220 aa27.45■■□□□ 1.98
SMARCC2-204ENST00000547356 TRPV1Q8NER1 839 aa27.45■■□□□ 1.98
SMARCC2-204ENST00000547356 CRISPLD2Q9H0B8 497 aa27.45■■□□□ 1.98
SMARCC2-204ENST00000547356 MKI67P46013 3256 aaKnown RBP27.43■■□□□ 1.98
SMARCC2-204ENST00000547356 FARP2O94887 1054 aaPredicted RBP27.43■■□□□ 1.98
SMARCC2-204ENST00000547356 GOLGA8HP0CJ92 632 aa27.43■■□□□ 1.98
SMARCC2-204ENST00000547356 SNHG28P0DPA3 235 aa27.43■■□□□ 1.98
SMARCC2-204ENST00000547356 OAZ1P54368 228 aa27.43■■□□□ 1.98
SMARCC2-204ENST00000547356 ZNF543Q08ER8 600 aa27.43■■□□□ 1.98
SMARCC2-204ENST00000547356 SYDE2Q5VT97 1194 aa27.43■■□□□ 1.98
SMARCC2-204ENST00000547356 OLFML2BQ68BL8 750 aa27.43■■□□□ 1.98
SMARCC2-204ENST00000547356 UBE2Q1Q7Z7E8 422 aa27.43■■□□□ 1.98
SMARCC2-204ENST00000547356 PNMA1Q8ND90 353 aa27.43■■□□□ 1.98
SMARCC2-204ENST00000547356 MAML3Q96JK9 1138 aa27.43■■□□□ 1.98
SMARCC2-204ENST00000547356 ZNFX1Q9P2E3 1918 aaKnown RBP27.42■■□□□ 1.98
SMARCC2-204ENST00000547356 E7EWF7 191 aa27.42■■□□□ 1.98
SMARCC2-204ENST00000547356 ZNF792Q3KQV3 632 aa27.42■■□□□ 1.98
SMARCC2-204ENST00000547356 BTNL9Q6UXG8 535 aa27.42■■□□□ 1.98
SMARCC2-204ENST00000547356 KIAA1211Q6ZU35 1233 aa27.42■■□□□ 1.98
SMARCC2-204ENST00000547356 ANKS1AQ92625 1134 aa27.42■■□□□ 1.98
SMARCC2-204ENST00000547356 UBAC1Q9BSL1 405 aa27.42■■□□□ 1.98
SMARCC2-204ENST00000547356 CPVLQ9H3G5 476 aa27.42■■□□□ 1.98
SMARCC2-204ENST00000547356 KAT14Q9H8E8 782 aa27.42■■□□□ 1.98
SMARCC2-204ENST00000547356 CENPBP07199 599 aaPredicted RBP27.41■■□□□ 1.98
SMARCC2-204ENST00000547356 FDX1P10109 184 aa27.41■■□□□ 1.98
SMARCC2-204ENST00000547356 NT5C2P49902 561 aa27.41■■□□□ 1.98
SMARCC2-204ENST00000547356 CCDC178Q5BJE1 867 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms