RNA–Protein interactions for RNA: ENST00000547148.5

PFKM-208, Transcript of phosphofructokinase, muscle, human

TSL 3

Gene PFKM, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-208	ENST00000547148	DHX16	O60231	1041 aa	Known RBP	13.86	□□□□□ -0.19
PFKM-208	ENST00000547148	PLA2G6	O60733	806 aa		13.86	□□□□□ -0.19
PFKM-208	ENST00000547148	CETP	P11597	493 aa		13.86	□□□□□ -0.19
PFKM-208	ENST00000547148	GNAQ	P50148	359 aa		13.86	□□□□□ -0.19
PFKM-208	ENST00000547148	CCL15	Q16663	113 aa		13.86	□□□□□ -0.19
PFKM-208	ENST00000547148	CYP4F22	Q6NT55	531 aa		13.86	□□□□□ -0.19
PFKM-208	ENST00000547148	GADL1	Q6ZQY3	521 aa		13.86	□□□□□ -0.19
PFKM-208	ENST00000547148	FASTKD5	Q7L8L6	764 aa	Known RBP	13.86	□□□□□ -0.19
PFKM-208	ENST00000547148	NSUN7	Q8NE18	718 aa	Known RBP	13.86	□□□□□ -0.19
PFKM-208	ENST00000547148	LZTS2	Q9BRK4	669 aa		13.86	□□□□□ -0.19
PFKM-208	ENST00000547148	TANGO6	Q9C0B7	1094 aa		13.86	□□□□□ -0.19
PFKM-208	ENST00000547148	FBXO28	Q9NVF7	368 aa		13.86	□□□□□ -0.19
PFKM-208	ENST00000547148	TSKS	Q9UJT2	592 aa		13.86	□□□□□ -0.19
PFKM-208	ENST00000547148	USP17L15	C9J2P7	530 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	USP17L13	C9JLJ4	530 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	USP17L11	C9JVI0	530 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	USP17L18	D6R9N7	530 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	USP17L22	D6RA61	530 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	USP17L17	D6RBQ6	530 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	USP17L19	D6RCP7	530 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	USP17L20	D6RJB6	530 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	CA12	O43570	354 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	IFNAR1	P17181	557 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	SMARCA1	P28370	1054 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	HOXA7	P31268	230 aa	Predicted RBP	13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	SLC16A2	P36021	539 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	STAT2	P52630	851 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	USP17L24	Q0WX57	530 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	BECN1	Q14457	450 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	CATSPERG	Q6ZRH7	1159 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	SMARCC2	Q8TAQ2	1214 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	SLF1	Q9BQI6	1058 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	SPZ1	Q9BXG8	430 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	RIOX1	Q9H6W3	641 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	FEM1B	Q9UK73	627 aa		13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	ISY1	Q9ULR0	285 aa	Known RBP	13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	TNRC18	O15417	2968 aa	Predicted RBP	13.85	□□□□□ -0.19
PFKM-208	ENST00000547148	PTPDC1	A2A3K4	754 aa		13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	MANSC4	A6NHS7	340 aa	Predicted RBP	13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	BTBD19	C9JJ37	291 aa		13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	CPLX1	O14810	134 aa		13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	JAK2	O60674	1132 aa		13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	DTNB	O60941	627 aa		13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	PPFIA3	O75145	1194 aa		13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	FLOT1	O75955	427 aa		13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	SYDE2	Q5VT97	1194 aa		13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	ANKRD23	Q86SG2	305 aa		13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	FAM160B2	Q86V87	743 aa		13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	PHKB	Q93100	1093 aa		13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	MTMR8	Q96EF0	704 aa		13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	ZIC5	Q96T25	663 aa		13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	PTPN18	Q99952	460 aa		13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	LLPH	Q9BRT6	129 aa	Known RBP	13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	UBA5	Q9GZZ9	404 aa		13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	JMJD4	Q9H9V9	463 aa		13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	PPP1R9A	Q9ULJ8	1098 aa		13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	PRR12	Q9ULL5	1215 aa		13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	SLC45A1	Q9Y2W3	748 aa		13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	STK36	Q9NRP7	1315 aa		13.84	□□□□□ -0.19
PFKM-208	ENST00000547148	THSD7B	Q9C0I4	1608 aa		13.83	□□□□□ -0.2
PFKM-208	ENST00000547148	CDKL5	O76039	1030 aa		13.83	□□□□□ -0.2
PFKM-208	ENST00000547148	FMNL1	O95466	1100 aa	Predicted RBP	13.83	□□□□□ -0.2
PFKM-208	ENST00000547148	CPLX2	Q6PUV4	134 aa	Known RBP	13.83	□□□□□ -0.2
PFKM-208	ENST00000547148	ADGRF4	Q8IZF3	695 aa		13.83	□□□□□ -0.2
PFKM-208	ENST00000547148	FAM43A	Q8N2R8	423 aa		13.83	□□□□□ -0.2
PFKM-208	ENST00000547148	CCDC82	Q8N4S0	544 aa		13.83	□□□□□ -0.2
PFKM-208	ENST00000547148	CHURC1	Q8WUH1	139 aa		13.83	□□□□□ -0.2
PFKM-208	ENST00000547148	INTS4	Q96HW7	963 aa	Known RBP	13.83	□□□□□ -0.2
PFKM-208	ENST00000547148	MYPN	Q86TC9	1320 aa		13.83	□□□□□ -0.2
PFKM-208	ENST00000547148		A0A0G2JMZ2	1700 aa		13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	PRPF3	O43395	683 aa	Known RBP	13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	FDPS	P14324	419 aa	Known RBP	13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	MAP2K2	P36507	400 aa		13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	KIF23	Q02241	960 aa	Predicted RBP	13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	IK	Q13123	557 aa	Predicted RBP	13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	NOG	Q13253	232 aa		13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	COG2	Q14746	738 aa		13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	POTEE	Q6S8J3	1075 aa		13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	PRPF38A	Q8NAV1	312 aa	Known RBP	13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	KIFC2	Q96AC6	838 aa		13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	PIGS	Q96S52	555 aa		13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	SLC26A6	Q9BXS9	759 aa		13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	RNF26	Q9BY78	433 aa	Predicted RBP	13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	RANBP17	Q9H2T7	1088 aa	Known RBP	13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	ADAMTS5	Q9UNA0	930 aa		13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	RLF	Q13129	1914 aa		13.82	□□□□□ -0.2
PFKM-208	ENST00000547148	PARP14	Q460N5	1801 aa		13.81	□□□□□ -0.2
PFKM-208	ENST00000547148	hCG_1642624	A0A1W2PR95	340 aa		13.81	□□□□□ -0.2
PFKM-208	ENST00000547148	PDHX	O00330	501 aa		13.81	□□□□□ -0.2
PFKM-208	ENST00000547148	AOC2	O75106	756 aa		13.81	□□□□□ -0.2
PFKM-208	ENST00000547148	DSG3	P32926	999 aa		13.81	□□□□□ -0.2
PFKM-208	ENST00000547148	SLC4A3	P48751	1232 aa		13.81	□□□□□ -0.2
PFKM-208	ENST00000547148	SSRP1	Q08945	709 aa	Known RBP	13.81	□□□□□ -0.2
PFKM-208	ENST00000547148	SREBF2	Q12772	1141 aa		13.81	□□□□□ -0.2
PFKM-208	ENST00000547148	PKN1	Q16512	942 aa		13.81	□□□□□ -0.2
PFKM-208	ENST00000547148	CDC37	Q16543	378 aa	Predicted RBP	13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms