RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 SRCAPQ6ZRS2 3230 aa25.68■■□□□ 1.7
HOMER3-204ENST00000539827 ICA1Q05084 483 aa25.67■■□□□ 1.7
HOMER3-204ENST00000539827 RBM26Q5T8P6 1007 aaKnown RBP25.67■■□□□ 1.7
HOMER3-204ENST00000539827 NLGN2Q8NFZ4 835 aa25.67■■□□□ 1.7
HOMER3-204ENST00000539827 FAM200AQ8TCP9 573 aa25.67■■□□□ 1.7
HOMER3-204ENST00000539827 MKL1Q969V6 931 aa25.67■■□□□ 1.7
HOMER3-204ENST00000539827 DNAJC25Q9H1X3 360 aa25.67■■□□□ 1.7
HOMER3-204ENST00000539827 GH2P01242 217 aa25.67■■□□□ 1.7
HOMER3-204ENST00000539827 GALNT17Q6IS24 598 aa25.67■■□□□ 1.7
HOMER3-204ENST00000539827 CSRNP2Q9H175 543 aa25.67■■□□□ 1.7
HOMER3-204ENST00000539827 KCNH3Q9ULD8 1083 aa25.67■■□□□ 1.7
HOMER3-204ENST00000539827 CCDC194A0A1B0GVG4 234 aa25.66■■□□□ 1.7
HOMER3-204ENST00000539827 SMCO2A6NFE2 343 aa25.66■■□□□ 1.7
HOMER3-204ENST00000539827 SLC16A2P36021 539 aa25.66■■□□□ 1.7
HOMER3-204ENST00000539827 TNIP1Q15025 636 aa25.66■■□□□ 1.7
HOMER3-204ENST00000539827 NBPF9Q3BBW0 867 aa25.66■■□□□ 1.7
HOMER3-204ENST00000539827 ADGRF4Q8IZF3 695 aa25.66■■□□□ 1.7
HOMER3-204ENST00000539827 ZBED3Q96IU2 234 aaPredicted RBP25.66■■□□□ 1.7
HOMER3-204ENST00000539827 CBX8Q9HC52 389 aa25.66■■□□□ 1.7
HOMER3-204ENST00000539827 FAM13BQ9NYF5 915 aa25.66■■□□□ 1.7
HOMER3-204ENST00000539827 BMP15O95972 392 aa25.65■■□□□ 1.7
HOMER3-204ENST00000539827 TRAPPC10P48553 1259 aa25.65■■□□□ 1.7
HOMER3-204ENST00000539827 SLFN13Q68D06 897 aa25.65■■□□□ 1.7
HOMER3-204ENST00000539827 CCDC12Q8WUD4 166 aaPredicted RBP25.65■■□□□ 1.7
HOMER3-204ENST00000539827 TIGD1Q96MW7 591 aa25.65■■□□□ 1.7
HOMER3-204ENST00000539827 TMEM39BQ9GZU3 492 aa25.65■■□□□ 1.7
HOMER3-204ENST00000539827 ZMYND12Q9H0C1 365 aa25.65■■□□□ 1.7
HOMER3-204ENST00000539827 JMJD4Q9H9V9 463 aa25.65■■□□□ 1.7
HOMER3-204ENST00000539827 MCM7P33993 719 aa25.65■■□□□ 1.7
HOMER3-204ENST00000539827 PTGDRQ13258 359 aa25.65■■□□□ 1.7
HOMER3-204ENST00000539827 GPATCH4Q5T3I0 446 aaKnown RBP25.65■■□□□ 1.7
HOMER3-204ENST00000539827 CDAN1Q8IWY9 1227 aa25.65■■□□□ 1.7
HOMER3-204ENST00000539827 ZNF579Q8NAF0 562 aaKnown RBP25.65■■□□□ 1.7
HOMER3-204ENST00000539827 COA7Q96BR5 231 aa25.65■■□□□ 1.7
HOMER3-204ENST00000539827 MYOZ2Q9NPC6 264 aa25.65■■□□□ 1.7
HOMER3-204ENST00000539827 USP25Q9UHP3 1055 aa25.65■■□□□ 1.7
HOMER3-204ENST00000539827 HERC5Q9UII4 1024 aaKnown RBP25.65■■□□□ 1.7
HOMER3-204ENST00000539827 MORC2Q9Y6X9 1032 aaPredicted RBP25.65■■□□□ 1.7
HOMER3-204ENST00000539827 GOLGB1Q14789 3259 aaKnown RBP25.64■■□□□ 1.7
HOMER3-204ENST00000539827 WNT10BO00744 389 aa25.64■■□□□ 1.7
HOMER3-204ENST00000539827 PRELPP51888 382 aa25.64■■□□□ 1.7
HOMER3-204ENST00000539827 STX1AQ16623 288 aa25.64■■□□□ 1.7
HOMER3-204ENST00000539827 LUZP1Q86V48 1076 aa25.64■■□□□ 1.7
HOMER3-204ENST00000539827 PDLIM2Q96JY6 352 aa25.64■■□□□ 1.7
HOMER3-204ENST00000539827 C6orf50Q9HD87 102 aa25.64■■□□□ 1.7
HOMER3-204ENST00000539827 KIAA1468Q9P260 1216 aa25.64■■□□□ 1.7
HOMER3-204ENST00000539827 MYO1BO43795 1136 aa25.64■■□□□ 1.69
HOMER3-204ENST00000539827 C11orf57Q6ZUT1 292 aaPredicted RBP25.64■■□□□ 1.69
HOMER3-204ENST00000539827 FAM177A1Q8N128 213 aaPredicted RBP25.64■■□□□ 1.69
HOMER3-204ENST00000539827 ATP2C1P98194 919 aaPredicted RBP25.63■■□□□ 1.69
HOMER3-204ENST00000539827 INF2Q27J81 1249 aa25.63■■□□□ 1.69
HOMER3-204ENST00000539827 LONRF3Q496Y0 759 aa25.63■■□□□ 1.69
HOMER3-204ENST00000539827 USP49Q70CQ1 688 aa25.63■■□□□ 1.69
HOMER3-204ENST00000539827 USP17L10C9JJH3 530 aa25.62■■□□□ 1.69
HOMER3-204ENST00000539827 FKBP1CQ5VVH2 108 aa25.62■■□□□ 1.69
HOMER3-204ENST00000539827 DCAF4Q8WV16 495 aa25.62■■□□□ 1.69
HOMER3-204ENST00000539827 SCAF8Q9UPN6 1271 aaKnown RBP25.62■■□□□ 1.69
HOMER3-204ENST00000539827 GNA11P29992 359 aa25.62■■□□□ 1.69
HOMER3-204ENST00000539827 SLC1A4P43007 532 aa25.62■■□□□ 1.69
HOMER3-204ENST00000539827 ZNF165P49910 485 aa25.62■■□□□ 1.69
HOMER3-204ENST00000539827 KRBA2Q6ZNG9 492 aa25.62■■□□□ 1.69
HOMER3-204ENST00000539827 LTBP3Q9NS15 1303 aa25.61■■□□□ 1.69
HOMER3-204ENST00000539827 PNMA6FA0A0J9YX94 578 aa25.61■■□□□ 1.69
HOMER3-204ENST00000539827 PLCB2Q00722 1185 aa25.61■■□□□ 1.69
HOMER3-204ENST00000539827 CNNM3Q8NE01 707 aa25.61■■□□□ 1.69
HOMER3-204ENST00000539827 FERMT2Q96AC1 680 aa25.61■■□□□ 1.69
HOMER3-204ENST00000539827 TRIM44Q96DX7 344 aaPredicted RBP25.61■■□□□ 1.69
HOMER3-204ENST00000539827 ANO10Q9NW15 660 aa25.61■■□□□ 1.69
HOMER3-204ENST00000539827 GJA3Q9Y6H8 435 aa25.61■■□□□ 1.69
HOMER3-204ENST00000539827 hCG_1984214I3L0E3 225 aa25.6■■□□□ 1.69
HOMER3-204ENST00000539827 POLR2DO15514 142 aaKnown RBP25.6■■□□□ 1.69
HOMER3-204ENST00000539827 MIGA2Q7L4E1 593 aa25.6■■□□□ 1.69
HOMER3-204ENST00000539827 ZNF713Q8N859 430 aaPredicted RBP25.6■■□□□ 1.69
HOMER3-204ENST00000539827 VWA3AA6NCI4 1184 aa25.6■■□□□ 1.69
HOMER3-204ENST00000539827 F5H6K3 240 aa25.6■■□□□ 1.69
HOMER3-204ENST00000539827 PPP1R11O60927 126 aaPredicted RBP25.6■■□□□ 1.69
HOMER3-204ENST00000539827 EGFRP00533 1210 aa25.6■■□□□ 1.69
HOMER3-204ENST00000539827 KLRC3Q07444 240 aa25.6■■□□□ 1.69
HOMER3-204ENST00000539827 FAM83AQ86UY5 434 aa25.6■■□□□ 1.69
HOMER3-204ENST00000539827 BIN2Q9UBW5 565 aaPredicted RBP25.6■■□□□ 1.69
HOMER3-204ENST00000539827 SERTAD1Q9UHV2 236 aa25.6■■□□□ 1.69
HOMER3-204ENST00000539827 BIN1O00499 593 aa25.59■■□□□ 1.69
HOMER3-204ENST00000539827 AP5Z1O43299 807 aa25.59■■□□□ 1.69
HOMER3-204ENST00000539827 GMPSP49915 693 aaPredicted RBP25.59■■□□□ 1.69
HOMER3-204ENST00000539827 JAKMIP3Q5VZ66 844 aa25.59■■□□□ 1.69
HOMER3-204ENST00000539827 KRT25Q7Z3Z0 450 aa25.59■■□□□ 1.69
HOMER3-204ENST00000539827 PDILTQ8N807 584 aa25.59■■□□□ 1.69
HOMER3-204ENST00000539827 EPSTI1Q96J88 318 aa25.59■■□□□ 1.69
HOMER3-204ENST00000539827 NUP88Q99567 741 aaPredicted RBP25.59■■□□□ 1.69
HOMER3-204ENST00000539827 TMEM260Q9NX78 707 aa25.59■■□□□ 1.69
HOMER3-204ENST00000539827 ESYT2A0FGR8 921 aa25.58■■□□□ 1.69
HOMER3-204ENST00000539827 ZNF280AP59817 542 aaPredicted RBP25.58■■□□□ 1.69
HOMER3-204ENST00000539827 PNOCQ13519 176 aa25.58■■□□□ 1.69
HOMER3-204ENST00000539827 C4orf32Q8N8J7 132 aa25.58■■□□□ 1.69
HOMER3-204ENST00000539827 A0A1W2PRG0 241 aa25.58■■□□□ 1.69
HOMER3-204ENST00000539827 ADCY5O95622 1261 aa25.58■■□□□ 1.69
HOMER3-204ENST00000539827 NDUFB10O96000 172 aa25.58■■□□□ 1.69
HOMER3-204ENST00000539827 RPS12P25398 132 aaKnown RBP25.58■■□□□ 1.69
HOMER3-204ENST00000539827 IL17AQ16552 155 aa25.58■■□□□ 1.69
HOMER3-204ENST00000539827 SYMPKQ92797 1274 aaKnown RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms