RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.33□□□□□ -0.44
LEMD3-202ENST00000539442 FZD1Q9UP38 647 aa12.33□□□□□ -0.44
LEMD3-202ENST00000539442 C19orf81C9J6K1 198 aa12.32□□□□□ -0.44
LEMD3-202ENST00000539442 H3BQV1 296 aa12.32□□□□□ -0.44
LEMD3-202ENST00000539442 hCG_1984214I3L0E3 225 aa12.32□□□□□ -0.44
LEMD3-202ENST00000539442 TRAF5O00463 557 aa12.32□□□□□ -0.44
LEMD3-202ENST00000539442 WDR46O15213 610 aaKnown RBP12.32□□□□□ -0.44
LEMD3-202ENST00000539442 CYTH3O43739 400 aa12.32□□□□□ -0.44
LEMD3-202ENST00000539442 RAD21O60216 631 aa12.32□□□□□ -0.44
LEMD3-202ENST00000539442 PLA2G6O60733 806 aa12.32□□□□□ -0.44
LEMD3-202ENST00000539442 DTNBO60941 627 aa12.32□□□□□ -0.44
LEMD3-202ENST00000539442 PPFIA3O75145 1194 aa12.32□□□□□ -0.44
LEMD3-202ENST00000539442 XBP1P17861 261 aa12.32□□□□□ -0.44
LEMD3-202ENST00000539442 BACE1P56817 501 aa12.32□□□□□ -0.44
LEMD3-202ENST00000539442 TRIM29Q14134 588 aa12.32□□□□□ -0.44
LEMD3-202ENST00000539442 PFKFB3Q16875 520 aaPredicted RBP12.32□□□□□ -0.44
LEMD3-202ENST00000539442 LDLRAD1Q5T700 205 aa12.32□□□□□ -0.44
LEMD3-202ENST00000539442 IFFO2Q5TF58 517 aa12.32□□□□□ -0.44
LEMD3-202ENST00000539442 BTNL9Q6UXG8 535 aa12.32□□□□□ -0.44
LEMD3-202ENST00000539442 CCDC84Q86UT8 332 aaPredicted RBP12.32□□□□□ -0.44
LEMD3-202ENST00000539442 ZNF713Q8N859 430 aaPredicted RBP12.32□□□□□ -0.44
LEMD3-202ENST00000539442 RBM46Q8TBY0 533 aaKnown RBP12.32□□□□□ -0.44
LEMD3-202ENST00000539442 RNF166Q96A37 237 aaPredicted RBP12.32□□□□□ -0.44
LEMD3-202ENST00000539442 RRP36Q96EU6 259 aaKnown RBP12.32□□□□□ -0.44
LEMD3-202ENST00000539442 C12orf42Q96LP6 360 aa12.32□□□□□ -0.44
LEMD3-202ENST00000539442 GPBP1L1Q9HC44 474 aaPredicted RBP12.32□□□□□ -0.44
LEMD3-202ENST00000539442 GPCPD1Q9NPB8 672 aa12.32□□□□□ -0.44
LEMD3-202ENST00000539442 MTMR6Q9Y217 621 aa12.32□□□□□ -0.44
LEMD3-202ENST00000539442 ZHX2Q9Y6X8 837 aa12.32□□□□□ -0.44
LEMD3-202ENST00000539442 V9GY48 417 aaPredicted RBP12.32□□□□□ -0.44
LEMD3-202ENST00000539442 VPS37CA5D8V6 355 aaPredicted RBP12.31□□□□□ -0.44
LEMD3-202ENST00000539442 SPDYE5A6NIY4 337 aa12.31□□□□□ -0.44
LEMD3-202ENST00000539442 ZSCAN22P10073 491 aaPredicted RBP12.31□□□□□ -0.44
LEMD3-202ENST00000539442 SCG2P13521 617 aa12.31□□□□□ -0.44
LEMD3-202ENST00000539442 PPATQ06203 517 aa12.31□□□□□ -0.44
LEMD3-202ENST00000539442 SPP2Q13103 211 aa12.31□□□□□ -0.44
LEMD3-202ENST00000539442 MTMR2Q13614 643 aa12.31□□□□□ -0.44
LEMD3-202ENST00000539442 PKP1Q13835 747 aa12.31□□□□□ -0.44
LEMD3-202ENST00000539442 PKN1Q16512 942 aa12.31□□□□□ -0.44
LEMD3-202ENST00000539442 SLC35G1Q2M3R5 365 aa12.31□□□□□ -0.44
LEMD3-202ENST00000539442 KCTD1Q719H9 257 aa12.31□□□□□ -0.44
LEMD3-202ENST00000539442 FAM160B2Q86V87 743 aa12.31□□□□□ -0.44
LEMD3-202ENST00000539442 ERO1BQ86YB8 467 aa12.31□□□□□ -0.44
LEMD3-202ENST00000539442 FBXO18Q8NFZ0 1043 aa12.31□□□□□ -0.44
LEMD3-202ENST00000539442 UBA5Q9GZZ9 404 aa12.31□□□□□ -0.44
LEMD3-202ENST00000539442 SEC63Q9UGP8 760 aaKnown RBP12.31□□□□□ -0.44
LEMD3-202ENST00000539442 ZDHHC9Q9Y397 364 aa12.31□□□□□ -0.44
LEMD3-202ENST00000539442 AFG3L2Q9Y4W6 797 aa12.31□□□□□ -0.44
LEMD3-202ENST00000539442 OTOFQ9HC10 1997 aa12.3□□□□□ -0.44
LEMD3-202ENST00000539442 FAM205CA6NFA0 338 aa12.3□□□□□ -0.44
LEMD3-202ENST00000539442 TMEM232C9JQI7 657 aa12.3□□□□□ -0.44
LEMD3-202ENST00000539442 ITGBL1O95965 494 aaPredicted RBP12.3□□□□□ -0.44
LEMD3-202ENST00000539442 F13A1P00488 732 aa12.3□□□□□ -0.44
LEMD3-202ENST00000539442 STAT2P52630 851 aa12.3□□□□□ -0.44
LEMD3-202ENST00000539442 ZYXQ15942 572 aaKnown RBP12.3□□□□□ -0.44
LEMD3-202ENST00000539442 SH3D19Q5HYK7 790 aa12.3□□□□□ -0.44
LEMD3-202ENST00000539442 KIAA1755Q5JYT7 1200 aa12.3□□□□□ -0.44
LEMD3-202ENST00000539442 FAM83BQ5T0W9 1011 aa12.3□□□□□ -0.44
LEMD3-202ENST00000539442 ADGRF4Q8IZF3 695 aa12.3□□□□□ -0.44
LEMD3-202ENST00000539442 SPICE1Q8N0Z3 855 aa12.3□□□□□ -0.44
LEMD3-202ENST00000539442 C2orf69Q8N8R5 385 aa12.3□□□□□ -0.44
LEMD3-202ENST00000539442 CHURC1Q8WUH1 139 aa12.3□□□□□ -0.44
LEMD3-202ENST00000539442 MTMR8Q96EF0 704 aa12.3□□□□□ -0.44
LEMD3-202ENST00000539442 ZNF408Q9H9D4 720 aa12.3□□□□□ -0.44
LEMD3-202ENST00000539442 GBA2Q9HCG7 927 aaPredicted RBP12.3□□□□□ -0.44
LEMD3-202ENST00000539442 SH3GLB2Q9NR46 395 aa12.3□□□□□ -0.44
LEMD3-202ENST00000539442 FEM1BQ9UK73 627 aa12.3□□□□□ -0.44
LEMD3-202ENST00000539442 ISY1Q9ULR0 285 aaKnown RBP12.3□□□□□ -0.44
LEMD3-202ENST00000539442 ATP6V1DQ9Y5K8 247 aa12.3□□□□□ -0.44
LEMD3-202ENST00000539442 PNMA6FA0A0J9YX94 578 aa12.29□□□□□ -0.44
LEMD3-202ENST00000539442 TRIM75PA6NK02 468 aa12.29□□□□□ -0.44
LEMD3-202ENST00000539442 CXCL11O14625 94 aa12.29□□□□□ -0.44
LEMD3-202ENST00000539442 ZBTB5O15062 677 aa12.29□□□□□ -0.44
LEMD3-202ENST00000539442 CELF2O95319 508 aaKnown RBP12.29□□□□□ -0.44
LEMD3-202ENST00000539442 VCAM1P19320 739 aa12.29□□□□□ -0.44
LEMD3-202ENST00000539442 IKQ13123 557 aaPredicted RBP12.29□□□□□ -0.44
LEMD3-202ENST00000539442 PPIL2Q13356 520 aa12.29□□□□□ -0.44
LEMD3-202ENST00000539442 SYDE2Q5VT97 1194 aa12.29□□□□□ -0.44
LEMD3-202ENST00000539442 KRT40Q6A162 431 aa12.29□□□□□ -0.44
LEMD3-202ENST00000539442 TTBK2Q6IQ55 1244 aa12.29□□□□□ -0.44
LEMD3-202ENST00000539442 MOB2Q70IA6 237 aa12.29□□□□□ -0.44
LEMD3-202ENST00000539442 CCDC148Q8NFR7 591 aa12.29□□□□□ -0.44
LEMD3-202ENST00000539442 CCDC12Q8WUD4 166 aaPredicted RBP12.29□□□□□ -0.44
LEMD3-202ENST00000539442 AIFM3Q96NN9 605 aa12.29□□□□□ -0.44
LEMD3-202ENST00000539442 PIGSQ96S52 555 aa12.29□□□□□ -0.44
LEMD3-202ENST00000539442 NUP88Q99567 741 aaPredicted RBP12.29□□□□□ -0.44
LEMD3-202ENST00000539442 ZSCAN16Q9H4T2 348 aaPredicted RBP12.29□□□□□ -0.44
LEMD3-202ENST00000539442 ELP3Q9H9T3 547 aa12.29□□□□□ -0.44
LEMD3-202ENST00000539442 JMJD4Q9H9V9 463 aa12.29□□□□□ -0.44
LEMD3-202ENST00000539442 EMILIN3Q9NT22 766 aa12.29□□□□□ -0.44
LEMD3-202ENST00000539442 TMOD4Q9NZQ9 345 aa12.29□□□□□ -0.44
LEMD3-202ENST00000539442 PHIPQ8WWQ0 1821 aa12.28□□□□□ -0.44
LEMD3-202ENST00000539442 hCG_1642624A0A1W2PR95 340 aa12.28□□□□□ -0.44
LEMD3-202ENST00000539442 UBE2Q2LH0YL09 131 aa12.28□□□□□ -0.44
LEMD3-202ENST00000539442 KIF3CO14782 793 aa12.28□□□□□ -0.44
LEMD3-202ENST00000539442 MMP1P03956 469 aa12.28□□□□□ -0.44
LEMD3-202ENST00000539442 SLC16A2P36021 539 aa12.28□□□□□ -0.44
LEMD3-202ENST00000539442 TRAF1Q13077 416 aa12.28□□□□□ -0.44
LEMD3-202ENST00000539442 SAFBQ15424 915 aaKnown RBP eCLIP12.28□□□□□ -0.44
LEMD3-202ENST00000539442 PPP1R18Q6NYC8 613 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms