RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 C19orf81C9J6K1 198 aa18.13■□□□□ 0.49
SFSWAP-206ENST00000537582 WDR46O15213 610 aaKnown RBP18.13■□□□□ 0.49
SFSWAP-206ENST00000537582 PPP1R11O60927 126 aaPredicted RBP18.13■□□□□ 0.49
SFSWAP-206ENST00000537582 DEXIO95424 95 aa18.13■□□□□ 0.49
SFSWAP-206ENST00000537582 SH3D19Q5HYK7 790 aa18.13■□□□□ 0.49
SFSWAP-206ENST00000537582 SYDE2Q5VT97 1194 aa18.13■□□□□ 0.49
SFSWAP-206ENST00000537582 KIFC2Q96AC6 838 aa18.13■□□□□ 0.49
SFSWAP-206ENST00000537582 WNK4Q96J92 1243 aa18.13■□□□□ 0.49
SFSWAP-206ENST00000537582 TANGO6Q9C0B7 1094 aa18.13■□□□□ 0.49
SFSWAP-206ENST00000537582 PRR12Q9ULL5 1215 aa18.13■□□□□ 0.49
SFSWAP-206ENST00000537582 KCNH4Q9UQ05 1017 aa18.13■□□□□ 0.49
SFSWAP-206ENST00000537582 PTPRFP10586 1907 aa18.12■□□□□ 0.49
SFSWAP-206ENST00000537582 A0A0G2JLL6 359 aaPredicted RBP18.12■□□□□ 0.49
SFSWAP-206ENST00000537582 VPS37CA5D8V6 355 aaPredicted RBP18.12■□□□□ 0.49
SFSWAP-206ENST00000537582 STAT2P52630 851 aa18.12■□□□□ 0.49
SFSWAP-206ENST00000537582 AKAP17AQ02040 695 aaKnown RBP18.12■□□□□ 0.49
SFSWAP-206ENST00000537582 MOGSQ13724 837 aa18.12■□□□□ 0.49
SFSWAP-206ENST00000537582 BTNL9Q6UXG8 535 aa18.12■□□□□ 0.49
SFSWAP-206ENST00000537582 GADL1Q6ZQY3 521 aa18.12■□□□□ 0.49
SFSWAP-206ENST00000537582 PRRT2Q7Z6L0 340 aaPredicted RBP18.12■□□□□ 0.49
SFSWAP-206ENST00000537582 SAPCD2Q86UD0 394 aa18.12■□□□□ 0.49
SFSWAP-206ENST00000537582 TMOD4Q9NZQ9 345 aa18.12■□□□□ 0.49
SFSWAP-206ENST00000537582 VPS54Q9P1Q0 977 aa18.12■□□□□ 0.49
SFSWAP-206ENST00000537582 MTMR6Q9Y217 621 aa18.12■□□□□ 0.49
SFSWAP-206ENST00000537582 STX6O43752 255 aa18.11■□□□□ 0.49
SFSWAP-206ENST00000537582 SCG2P13521 617 aa18.11■□□□□ 0.49
SFSWAP-206ENST00000537582 SMARCA1P28370 1054 aa18.11■□□□□ 0.49
SFSWAP-206ENST00000537582 PFKFB3Q16875 520 aaPredicted RBP18.11■□□□□ 0.49
SFSWAP-206ENST00000537582 WWC2Q6AWC2 1192 aa18.11■□□□□ 0.49
SFSWAP-206ENST00000537582 TYW1BQ6NUM6 668 aa18.11■□□□□ 0.49
SFSWAP-206ENST00000537582 MTMR8Q96EF0 704 aa18.11■□□□□ 0.49
SFSWAP-206ENST00000537582 RRP36Q96EU6 259 aaKnown RBP18.11■□□□□ 0.49
SFSWAP-206ENST00000537582 KCNJ14Q9UNX9 436 aa18.11■□□□□ 0.49
SFSWAP-206ENST00000537582 UNCXA6NJT0 531 aa18.1■□□□□ 0.49
SFSWAP-206ENST00000537582 CXCL11O14625 94 aa18.1■□□□□ 0.49
SFSWAP-206ENST00000537582 ADAMTS3O15072 1205 aa18.1■□□□□ 0.49
SFSWAP-206ENST00000537582 CDC37Q16543 378 aaPredicted RBP18.1■□□□□ 0.49
SFSWAP-206ENST00000537582 HEATR3Q7Z4Q2 680 aa18.1■□□□□ 0.49
SFSWAP-206ENST00000537582 C8orf76Q96K31 380 aa18.1■□□□□ 0.49
SFSWAP-206ENST00000537582 CHMP5Q9NZZ3 219 aa18.1■□□□□ 0.49
SFSWAP-206ENST00000537582 FEM1BQ9UK73 627 aa18.1■□□□□ 0.49
SFSWAP-206ENST00000537582 FLOT1O75955 427 aa18.09■□□□□ 0.49
SFSWAP-206ENST00000537582 QRICH1Q2TAL8 776 aa18.09■□□□□ 0.49
SFSWAP-206ENST00000537582 SPRYD7Q5W111 196 aa18.09■□□□□ 0.49
SFSWAP-206ENST00000537582 CHAMP1Q96JM3 812 aa18.09■□□□□ 0.49
SFSWAP-206ENST00000537582 LOC285556D6RIA3 1793 aa18.09■□□□□ 0.49
SFSWAP-206ENST00000537582 BRD1O95696 1058 aa18.08■□□□□ 0.49
SFSWAP-206ENST00000537582 KRT40Q6A162 431 aa18.08■□□□□ 0.49
SFSWAP-206ENST00000537582 FERMT3Q86UX7 667 aa18.08■□□□□ 0.49
SFSWAP-206ENST00000537582 RASAL3Q86YV0 1011 aa18.08■□□□□ 0.49
SFSWAP-206ENST00000537582 COA7Q96BR5 231 aa18.08■□□□□ 0.49
SFSWAP-206ENST00000537582 SLF1Q9BQI6 1058 aa18.08■□□□□ 0.49
SFSWAP-206ENST00000537582 CIZ1Q9ULV3 898 aaPredicted RBP18.08■□□□□ 0.49
SFSWAP-206ENST00000537582 TLL2Q9Y6L7 1015 aa18.08■□□□□ 0.49
SFSWAP-206ENST00000537582 MYH6P13533 1939 aa18.08■□□□□ 0.48
SFSWAP-206ENST00000537582 H3BQV1 296 aa18.08■□□□□ 0.48
SFSWAP-206ENST00000537582 STXBP3O00186 592 aa18.08■□□□□ 0.48
SFSWAP-206ENST00000537582 ZBTB5O15062 677 aa18.08■□□□□ 0.48
SFSWAP-206ENST00000537582 PDCP20941 246 aa18.08■□□□□ 0.48
SFSWAP-206ENST00000537582 ZNF157P51786 506 aaPredicted RBP18.08■□□□□ 0.48
SFSWAP-206ENST00000537582 SNAPC2Q13487 334 aa18.08■□□□□ 0.48
SFSWAP-206ENST00000537582 IFFO2Q5TF58 517 aa18.08■□□□□ 0.48
SFSWAP-206ENST00000537582 GPAT2Q6NUI2 795 aa18.08■□□□□ 0.48
SFSWAP-206ENST00000537582 CCDC174Q6PII3 467 aa18.08■□□□□ 0.48
SFSWAP-206ENST00000537582 CATSPERGQ6ZRH7 1159 aa18.08■□□□□ 0.48
SFSWAP-206ENST00000537582 FAM160B2Q86V87 743 aa18.08■□□□□ 0.48
SFSWAP-206ENST00000537582 FBXO18Q8NFZ0 1043 aa18.08■□□□□ 0.48
SFSWAP-206ENST00000537582 CHURC1Q8WUH1 139 aa18.08■□□□□ 0.48
SFSWAP-206ENST00000537582 WASF1Q92558 559 aa18.08■□□□□ 0.48
SFSWAP-206ENST00000537582 ATG4CQ96DT6 458 aa18.08■□□□□ 0.48
SFSWAP-206ENST00000537582 MS4A4AQ96JQ5 239 aa18.08■□□□□ 0.48
SFSWAP-206ENST00000537582 SEC63Q9UGP8 760 aaKnown RBP18.08■□□□□ 0.48
SFSWAP-206ENST00000537582 ABT1Q9ULW3 272 aaKnown RBP18.08■□□□□ 0.48
SFSWAP-206ENST00000537582 KIF3AQ9Y496 699 aa18.08■□□□□ 0.48
SFSWAP-206ENST00000537582 PNMA6FA0A0J9YX94 578 aa18.07■□□□□ 0.48
SFSWAP-206ENST00000537582 TMEM88BA6NKF7 163 aa18.07■□□□□ 0.48
SFSWAP-206ENST00000537582 PLA2G6O60733 806 aa18.07■□□□□ 0.48
SFSWAP-206ENST00000537582 FSTL1Q12841 308 aa18.07■□□□□ 0.48
SFSWAP-206ENST00000537582 POTEEQ6S8J3 1075 aa18.07■□□□□ 0.48
SFSWAP-206ENST00000537582 RANBP17Q9H2T7 1088 aaKnown RBP18.07■□□□□ 0.48
SFSWAP-206ENST00000537582 PPP1R9AQ9ULJ8 1098 aa18.07■□□□□ 0.48
SFSWAP-206ENST00000537582 KIF28PB7ZC32 967 aa18.06■□□□□ 0.48
SFSWAP-206ENST00000537582 PEX10O60683 326 aa18.06■□□□□ 0.48
SFSWAP-206ENST00000537582 ZSCAN22P10073 491 aaPredicted RBP18.06■□□□□ 0.48
SFSWAP-206ENST00000537582 NPY5RQ15761 445 aa18.06■□□□□ 0.48
SFSWAP-206ENST00000537582 RGMBQ6NW40 437 aa18.06■□□□□ 0.48
SFSWAP-206ENST00000537582 PRPF38AQ8NAV1 312 aaKnown RBP18.06■□□□□ 0.48
SFSWAP-206ENST00000537582 PROCA1Q8NCQ7 364 aaPredicted RBP18.06■□□□□ 0.48
SFSWAP-206ENST00000537582 BRI3BPQ8WY22 251 aa18.06■□□□□ 0.48
SFSWAP-206ENST00000537582 BARHL2Q9NY43 387 aa18.06■□□□□ 0.48
SFSWAP-206ENST00000537582 RBM27Q9P2N5 1060 aaKnown RBP18.06■□□□□ 0.48
SFSWAP-206ENST00000537582 RLFQ13129 1914 aa18.06■□□□□ 0.48
SFSWAP-206ENST00000537582 PARP14Q460N5 1801 aa18.06■□□□□ 0.48
SFSWAP-206ENST00000537582 USP17L15C9J2P7 530 aa18.05■□□□□ 0.48
SFSWAP-206ENST00000537582 USP17L13C9JLJ4 530 aa18.05■□□□□ 0.48
SFSWAP-206ENST00000537582 USP17L11C9JVI0 530 aa18.05■□□□□ 0.48
SFSWAP-206ENST00000537582 USP17L18D6R9N7 530 aa18.05■□□□□ 0.48
SFSWAP-206ENST00000537582 USP17L22D6RA61 530 aa18.05■□□□□ 0.48
SFSWAP-206ENST00000537582 USP17L17D6RBQ6 530 aa18.05■□□□□ 0.48
SFSWAP-206ENST00000537582 USP17L19D6RCP7 530 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms