RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 V9GY48 417 aaPredicted RBP16.46■□□□□ 0.23
TRIM3-212ENST00000533064 PLA2G6O60733 806 aa16.45■□□□□ 0.22
TRIM3-212ENST00000533064 XBP1P17861 261 aa16.45■□□□□ 0.22
TRIM3-212ENST00000533064 SLC16A2P36021 539 aa16.45■□□□□ 0.22
TRIM3-212ENST00000533064 PIBF1Q8WXW3 757 aa16.45■□□□□ 0.22
TRIM3-212ENST00000533064 CPVLQ9H3G5 476 aa16.45■□□□□ 0.22
TRIM3-212ENST00000533064 RIOX1Q9H6W3 641 aa16.45■□□□□ 0.22
TRIM3-212ENST00000533064 KCNH4Q9UQ05 1017 aa16.45■□□□□ 0.22
TRIM3-212ENST00000533064 A0A0G2JLL6 359 aaPredicted RBP16.44■□□□□ 0.22
TRIM3-212ENST00000533064 FDPSP14324 419 aaKnown RBP16.44■□□□□ 0.22
TRIM3-212ENST00000533064 SNAPC2Q13487 334 aa16.44■□□□□ 0.22
TRIM3-212ENST00000533064 TRIM29Q14134 588 aa16.44■□□□□ 0.22
TRIM3-212ENST00000533064 SYDE2Q5VT97 1194 aa16.44■□□□□ 0.22
TRIM3-212ENST00000533064 BTNL9Q6UXG8 535 aa16.44■□□□□ 0.22
TRIM3-212ENST00000533064 GADL1Q6ZQY3 521 aa16.44■□□□□ 0.22
TRIM3-212ENST00000533064 PRRT2Q7Z6L0 340 aaPredicted RBP16.44■□□□□ 0.22
TRIM3-212ENST00000533064 HOMER1Q86YM7 354 aa16.44■□□□□ 0.22
TRIM3-212ENST00000533064 ADGRF4Q8IZF3 695 aa16.44■□□□□ 0.22
TRIM3-212ENST00000533064 PROCA1Q8NCQ7 364 aaPredicted RBP16.44■□□□□ 0.22
TRIM3-212ENST00000533064 WNK4Q96J92 1243 aa16.44■□□□□ 0.22
TRIM3-212ENST00000533064 ALG1Q9BT22 464 aa16.44■□□□□ 0.22
TRIM3-212ENST00000533064 RPAP3Q9H6T3 665 aaPredicted RBP16.44■□□□□ 0.22
TRIM3-212ENST00000533064 TMEM88BA6NKF7 163 aa16.43■□□□□ 0.22
TRIM3-212ENST00000533064 H3BQV1 296 aa16.43■□□□□ 0.22
TRIM3-212ENST00000533064 CYTH3O43739 400 aa16.43■□□□□ 0.22
TRIM3-212ENST00000533064 ZBTB48P10074 688 aaPredicted RBP16.43■□□□□ 0.22
TRIM3-212ENST00000533064 DGKZQ13574 1117 aa16.43■□□□□ 0.22
TRIM3-212ENST00000533064 IFFO2Q5TF58 517 aa16.43■□□□□ 0.22
TRIM3-212ENST00000533064 FASTKD5Q7L8L6 764 aaKnown RBP16.43■□□□□ 0.22
TRIM3-212ENST00000533064 TNPO1Q92973 898 aaKnown RBP16.43■□□□□ 0.22
TRIM3-212ENST00000533064 C8orf76Q96K31 380 aa16.43■□□□□ 0.22
TRIM3-212ENST00000533064 ABT1Q9ULW3 272 aaKnown RBP16.43■□□□□ 0.22
TRIM3-212ENST00000533064 hCG_1642624A0A1W2PR95 340 aa16.43■□□□□ 0.22
TRIM3-212ENST00000533064 FLOT1O75955 427 aa16.43■□□□□ 0.22
TRIM3-212ENST00000533064 SCG2P13521 617 aa16.43■□□□□ 0.22
TRIM3-212ENST00000533064 ZNF157P51786 506 aaPredicted RBP16.43■□□□□ 0.22
TRIM3-212ENST00000533064 GTF2A2P52657 109 aa16.43■□□□□ 0.22
TRIM3-212ENST00000533064 PFKFB3Q16875 520 aaPredicted RBP16.43■□□□□ 0.22
TRIM3-212ENST00000533064 SAMD1Q6SPF0 538 aaPredicted RBP16.43■□□□□ 0.22
TRIM3-212ENST00000533064 SAPCD2Q86UD0 394 aa16.43■□□□□ 0.22
TRIM3-212ENST00000533064 SLF1Q9BQI6 1058 aa16.43■□□□□ 0.22
TRIM3-212ENST00000533064 JMJD4Q9H9V9 463 aa16.43■□□□□ 0.22
TRIM3-212ENST00000533064 USP17L15C9J2P7 530 aa16.42■□□□□ 0.22
TRIM3-212ENST00000533064 USP17L13C9JLJ4 530 aa16.42■□□□□ 0.22
TRIM3-212ENST00000533064 USP17L11C9JVI0 530 aa16.42■□□□□ 0.22
TRIM3-212ENST00000533064 USP17L18D6R9N7 530 aa16.42■□□□□ 0.22
TRIM3-212ENST00000533064 USP17L22D6RA61 530 aa16.42■□□□□ 0.22
TRIM3-212ENST00000533064 USP17L17D6RBQ6 530 aa16.42■□□□□ 0.22
TRIM3-212ENST00000533064 USP17L19D6RCP7 530 aa16.42■□□□□ 0.22
TRIM3-212ENST00000533064 USP17L20D6RJB6 530 aa16.42■□□□□ 0.22
TRIM3-212ENST00000533064 STX6O43752 255 aa16.42■□□□□ 0.22
TRIM3-212ENST00000533064 SYT1P21579 422 aa16.42■□□□□ 0.22
TRIM3-212ENST00000533064 USP17L24Q0WX57 530 aa16.42■□□□□ 0.22
TRIM3-212ENST00000533064 PRPF38AQ8NAV1 312 aaKnown RBP16.42■□□□□ 0.22
TRIM3-212ENST00000533064 KIFC2Q96AC6 838 aa16.42■□□□□ 0.22
TRIM3-212ENST00000533064 PIGSQ96S52 555 aa16.42■□□□□ 0.22
TRIM3-212ENST00000533064 PRR12Q9ULL5 1215 aa16.42■□□□□ 0.22
TRIM3-212ENST00000533064 CTDP1Q9Y5B0 961 aaPredicted RBP16.42■□□□□ 0.22
TRIM3-212ENST00000533064 TLL2Q9Y6L7 1015 aa16.42■□□□□ 0.22
TRIM3-212ENST00000533064 RBBP6Q7Z6E9 1792 aaKnown RBP16.41■□□□□ 0.22
TRIM3-212ENST00000533064 PNMA6FA0A0J9YX94 578 aa16.41■□□□□ 0.22
TRIM3-212ENST00000533064 VPS37CA5D8V6 355 aaPredicted RBP16.41■□□□□ 0.22
TRIM3-212ENST00000533064 hCG_1984214I3L0E3 225 aa16.41■□□□□ 0.22
TRIM3-212ENST00000533064 ZBTB5O15062 677 aa16.41■□□□□ 0.22
TRIM3-212ENST00000533064 CETPP11597 493 aa16.41■□□□□ 0.22
TRIM3-212ENST00000533064 GJA5P36382 358 aa16.41■□□□□ 0.22
TRIM3-212ENST00000533064 FOSBP53539 338 aa16.41■□□□□ 0.22
TRIM3-212ENST00000533064 PABPC4Q13310 644 aaKnown RBP eCLIP16.41■□□□□ 0.22
TRIM3-212ENST00000533064 SPRYD7Q5W111 196 aa16.41■□□□□ 0.22
TRIM3-212ENST00000533064 RGMBQ6NW40 437 aa16.41■□□□□ 0.22
TRIM3-212ENST00000533064 ZNF713Q8N859 430 aaPredicted RBP16.41■□□□□ 0.22
TRIM3-212ENST00000533064 FDX1P10109 184 aa16.4■□□□□ 0.22
TRIM3-212ENST00000533064 MKRN3Q13064 507 aaKnown RBP16.4■□□□□ 0.22
TRIM3-212ENST00000533064 TRAF1Q13077 416 aa16.4■□□□□ 0.22
TRIM3-212ENST00000533064 PKN1Q16512 942 aa16.4■□□□□ 0.22
TRIM3-212ENST00000533064 CDC37Q16543 378 aaPredicted RBP16.4■□□□□ 0.22
TRIM3-212ENST00000533064 SLC35G1Q2M3R5 365 aa16.4■□□□□ 0.22
TRIM3-212ENST00000533064 CATSPERGQ6ZRH7 1159 aa16.4■□□□□ 0.22
TRIM3-212ENST00000533064 HEATR3Q7Z4Q2 680 aa16.4■□□□□ 0.22
TRIM3-212ENST00000533064 CCDC12Q8WUD4 166 aaPredicted RBP16.4■□□□□ 0.22
TRIM3-212ENST00000533064 GBP4Q96PP9 640 aa16.4■□□□□ 0.22
TRIM3-212ENST00000533064 FBXO28Q9NVF7 368 aa16.4■□□□□ 0.22
TRIM3-212ENST00000533064 WDR33Q9C0J8 1336 aaKnown RBP16.4■□□□□ 0.22
TRIM3-212ENST00000533064 COG2Q14746 738 aa16.4■□□□□ 0.22
TRIM3-212ENST00000533064 CLEC17AQ6ZS10 378 aa16.4■□□□□ 0.22
TRIM3-212ENST00000533064 RGS22Q8NE09 1264 aa16.4■□□□□ 0.22
TRIM3-212ENST00000533064 CCDC148Q8NFR7 591 aa16.4■□□□□ 0.22
TRIM3-212ENST00000533064 MTMR8Q96EF0 704 aa16.4■□□□□ 0.22
TRIM3-212ENST00000533064 AIFM3Q96NN9 605 aa16.4■□□□□ 0.22
TRIM3-212ENST00000533064 SH3GLB2Q9NR46 395 aa16.4■□□□□ 0.22
TRIM3-212ENST00000533064 PPP1R9AQ9ULJ8 1098 aa16.4■□□□□ 0.22
TRIM3-212ENST00000533064 AGTPBP1Q9UPW5 1226 aa16.4■□□□□ 0.22
TRIM3-212ENST00000533064 MCM4P33991 863 aa16.39■□□□□ 0.21
TRIM3-212ENST00000533064 IRX3P78415 501 aaPredicted RBP16.39■□□□□ 0.21
TRIM3-212ENST00000533064 PKP1Q13835 747 aa16.39■□□□□ 0.21
TRIM3-212ENST00000533064 QRICH1Q2TAL8 776 aa16.39■□□□□ 0.21
TRIM3-212ENST00000533064 FAM177A1Q8N128 213 aaPredicted RBP16.39■□□□□ 0.21
TRIM3-212ENST00000533064 FBXO18Q8NFZ0 1043 aa16.39■□□□□ 0.21
TRIM3-212ENST00000533064 GPKOWQ92917 476 aaPredicted RBP eCLIP16.39■□□□□ 0.21
TRIM3-212ENST00000533064 HHIPL1Q96JK4 782 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms