RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 SMARCA1P28370 1054 aa28.63■■■□□ 2.17
LDLRAD3-203ENST00000528989 AKAP17AQ02040 695 aaKnown RBP28.63■■■□□ 2.17
LDLRAD3-203ENST00000528989 TREML2Q5T2D2 321 aa28.63■■■□□ 2.17
LDLRAD3-203ENST00000528989 PRRT2Q7Z6L0 340 aaPredicted RBP28.63■■■□□ 2.17
LDLRAD3-203ENST00000528989 WNK4Q96J92 1243 aa28.63■■■□□ 2.17
LDLRAD3-203ENST00000528989 STK36Q9NRP7 1315 aa28.63■■■□□ 2.17
LDLRAD3-203ENST00000528989 DEXIO95424 95 aa28.62■■■□□ 2.17
LDLRAD3-203ENST00000528989 BTNL9Q6UXG8 535 aa28.62■■■□□ 2.17
LDLRAD3-203ENST00000528989 KIFC2Q96AC6 838 aa28.62■■■□□ 2.17
LDLRAD3-203ENST00000528989 ALG1Q9BT22 464 aa28.62■■■□□ 2.17
LDLRAD3-203ENST00000528989 GUCY1B3Q02153 619 aa28.61■■■□□ 2.17
LDLRAD3-203ENST00000528989 SYDE2Q5VT97 1194 aa28.61■■■□□ 2.17
LDLRAD3-203ENST00000528989 SHISA4Q96DD7 197 aa28.61■■■□□ 2.17
LDLRAD3-203ENST00000528989 PRR12Q9ULL5 1215 aa28.61■■■□□ 2.17
LDLRAD3-203ENST00000528989 FSTL1Q12841 308 aa28.61■■■□□ 2.17
LDLRAD3-203ENST00000528989 GADL1Q6ZQY3 521 aa28.61■■■□□ 2.17
LDLRAD3-203ENST00000528989 ZNF157P51786 506 aaPredicted RBP28.6■■■□□ 2.17
LDLRAD3-203ENST00000528989 MOGSQ13724 837 aa28.6■■■□□ 2.17
LDLRAD3-203ENST00000528989 RRP36Q96EU6 259 aaKnown RBP28.6■■■□□ 2.17
LDLRAD3-203ENST00000528989 FEM1BQ9UK73 627 aa28.6■■■□□ 2.17
LDLRAD3-203ENST00000528989 TMEM88BA6NKF7 163 aa28.59■■■□□ 2.17
LDLRAD3-203ENST00000528989 FLOT1O75955 427 aa28.59■■■□□ 2.17
LDLRAD3-203ENST00000528989 PFKFB3Q16875 520 aaPredicted RBP28.59■■■□□ 2.17
LDLRAD3-203ENST00000528989 FOXD4L5Q5VV16 416 aaPredicted RBP28.59■■■□□ 2.17
LDLRAD3-203ENST00000528989 SPRYD7Q5W111 196 aa28.59■■■□□ 2.17
LDLRAD3-203ENST00000528989 CHURC1Q8WUH1 139 aa28.59■■■□□ 2.17
LDLRAD3-203ENST00000528989 FOXD4L4Q8WXT5 416 aaPredicted RBP28.59■■■□□ 2.17
LDLRAD3-203ENST00000528989 GPKOWQ92917 476 aaPredicted RBP eCLIP28.59■■■□□ 2.17
LDLRAD3-203ENST00000528989 ABT1Q9ULW3 272 aaKnown RBP28.59■■■□□ 2.17
LDLRAD3-203ENST00000528989 TLL2Q9Y6L7 1015 aa28.59■■■□□ 2.17
LDLRAD3-203ENST00000528989 SCG2P13521 617 aa28.59■■■□□ 2.17
LDLRAD3-203ENST00000528989 MTMR8Q96EF0 704 aa28.59■■■□□ 2.17
LDLRAD3-203ENST00000528989 MS4A4AQ96JQ5 239 aa28.59■■■□□ 2.17
LDLRAD3-203ENST00000528989 STX6O43752 255 aa28.58■■■□□ 2.17
LDLRAD3-203ENST00000528989 PPP1R11O60927 126 aaPredicted RBP28.58■■■□□ 2.17
LDLRAD3-203ENST00000528989 SNAPC2Q13487 334 aa28.58■■■□□ 2.17
LDLRAD3-203ENST00000528989 VPS54Q9P1Q0 977 aa28.58■■■□□ 2.17
LDLRAD3-203ENST00000528989 ZDHHC9Q9Y397 364 aa28.58■■■□□ 2.17
LDLRAD3-203ENST00000528989 C8orf76Q96K31 380 aa28.57■■■□□ 2.16
LDLRAD3-203ENST00000528989 PLA2G6O60733 806 aa28.57■■■□□ 2.16
LDLRAD3-203ENST00000528989 CDC37Q16543 378 aaPredicted RBP28.57■■■□□ 2.16
LDLRAD3-203ENST00000528989 TYW1BQ6NUM6 668 aa28.57■■■□□ 2.16
LDLRAD3-203ENST00000528989 RGMBQ6NW40 437 aa28.57■■■□□ 2.16
LDLRAD3-203ENST00000528989 CATSPERGQ6ZRH7 1159 aa28.57■■■□□ 2.16
LDLRAD3-203ENST00000528989 SLF1Q9BQI6 1058 aa28.57■■■□□ 2.16
LDLRAD3-203ENST00000528989 SEC63Q9UGP8 760 aaKnown RBP28.57■■■□□ 2.16
LDLRAD3-203ENST00000528989 VPS37CA5D8V6 355 aaPredicted RBP28.56■■■□□ 2.16
LDLRAD3-203ENST00000528989 ZBTB5O15062 677 aa28.56■■■□□ 2.16
LDLRAD3-203ENST00000528989 TAL1P17542 331 aaPredicted RBP28.56■■■□□ 2.16
LDLRAD3-203ENST00000528989 QRICH1Q2TAL8 776 aa28.56■■■□□ 2.16
LDLRAD3-203ENST00000528989 WWC2Q6AWC2 1192 aa28.56■■■□□ 2.16
LDLRAD3-203ENST00000528989 HEATR3Q7Z4Q2 680 aa28.56■■■□□ 2.16
LDLRAD3-203ENST00000528989 FAM160B2Q86V87 743 aa28.56■■■□□ 2.16
LDLRAD3-203ENST00000528989 PRPF38AQ8NAV1 312 aaKnown RBP28.56■■■□□ 2.16
LDLRAD3-203ENST00000528989 PROCA1Q8NCQ7 364 aaPredicted RBP28.56■■■□□ 2.16
LDLRAD3-203ENST00000528989 WASF1Q92558 559 aa28.56■■■□□ 2.16
LDLRAD3-203ENST00000528989 KCNJ14Q9UNX9 436 aa28.56■■■□□ 2.16
LDLRAD3-203ENST00000528989 KIF3AQ9Y496 699 aa28.56■■■□□ 2.16
LDLRAD3-203ENST00000528989 PTPRFP10586 1907 aa28.56■■■□□ 2.16
LDLRAD3-203ENST00000528989 PNMA6FA0A0J9YX94 578 aa28.55■■■□□ 2.16
LDLRAD3-203ENST00000528989 PDCP20941 246 aa28.55■■■□□ 2.16
LDLRAD3-203ENST00000528989 RASAL3Q86YV0 1011 aa28.55■■■□□ 2.16
LDLRAD3-203ENST00000528989 FBXO18Q8NFZ0 1043 aa28.55■■■□□ 2.16
LDLRAD3-203ENST00000528989 MTMR6Q9Y217 621 aa28.55■■■□□ 2.16
LDLRAD3-203ENST00000528989 COA7Q96BR5 231 aa28.55■■■□□ 2.16
LDLRAD3-203ENST00000528989 RBM27Q9P2N5 1060 aaKnown RBP28.55■■■□□ 2.16
LDLRAD3-203ENST00000528989 PPP1R9AQ9ULJ8 1098 aa28.55■■■□□ 2.16
LDLRAD3-203ENST00000528989 USP17L15C9J2P7 530 aa28.54■■■□□ 2.16
LDLRAD3-203ENST00000528989 USP17L13C9JLJ4 530 aa28.54■■■□□ 2.16
LDLRAD3-203ENST00000528989 USP17L11C9JVI0 530 aa28.54■■■□□ 2.16
LDLRAD3-203ENST00000528989 USP17L18D6R9N7 530 aa28.54■■■□□ 2.16
LDLRAD3-203ENST00000528989 USP17L22D6RA61 530 aa28.54■■■□□ 2.16
LDLRAD3-203ENST00000528989 USP17L17D6RBQ6 530 aa28.54■■■□□ 2.16
LDLRAD3-203ENST00000528989 USP17L19D6RCP7 530 aa28.54■■■□□ 2.16
LDLRAD3-203ENST00000528989 USP17L20D6RJB6 530 aa28.54■■■□□ 2.16
LDLRAD3-203ENST00000528989 H3BQV1 296 aa28.54■■■□□ 2.16
LDLRAD3-203ENST00000528989 ZBTB48P10074 688 aaPredicted RBP28.54■■■□□ 2.16
LDLRAD3-203ENST00000528989 USP17L24Q0WX57 530 aa28.54■■■□□ 2.16
LDLRAD3-203ENST00000528989 IFFO2Q5TF58 517 aa28.54■■■□□ 2.16
LDLRAD3-203ENST00000528989 KRT40Q6A162 431 aa28.54■■■□□ 2.16
LDLRAD3-203ENST00000528989 GPAT2Q6NUI2 795 aa28.54■■■□□ 2.16
LDLRAD3-203ENST00000528989 CHMP5Q9NZZ3 219 aa28.54■■■□□ 2.16
LDLRAD3-203ENST00000528989 GTF2A2P52657 109 aa28.53■■■□□ 2.16
LDLRAD3-203ENST00000528989 CCDC174Q6PII3 467 aa28.53■■■□□ 2.16
LDLRAD3-203ENST00000528989 FASTKD5Q7L8L6 764 aaKnown RBP28.53■■■□□ 2.16
LDLRAD3-203ENST00000528989 ATG4CQ96DT6 458 aa28.53■■■□□ 2.16
LDLRAD3-203ENST00000528989 COG2Q14746 738 aa28.53■■■□□ 2.16
LDLRAD3-203ENST00000528989 BRI3BPQ8WY22 251 aa28.53■■■□□ 2.16
LDLRAD3-203ENST00000528989 CIZ1Q9ULV3 898 aaPredicted RBP28.53■■■□□ 2.16
LDLRAD3-203ENST00000528989 AGTPBP1Q9UPW5 1226 aa28.53■■■□□ 2.16
LDLRAD3-203ENST00000528989 STXBP3O00186 592 aa28.52■■■□□ 2.16
LDLRAD3-203ENST00000528989 RANBP17Q9H2T7 1088 aaKnown RBP28.52■■■□□ 2.16
LDLRAD3-203ENST00000528989 BARHL2Q9NY43 387 aa28.52■■■□□ 2.16
LDLRAD3-203ENST00000528989 CCL15-CCL14A0A0B4J2E2 113 aa28.51■■■□□ 2.15
LDLRAD3-203ENST00000528989 ADAMTS3O15072 1205 aa28.51■■■□□ 2.15
LDLRAD3-203ENST00000528989 BRD1O95696 1058 aa28.51■■■□□ 2.15
LDLRAD3-203ENST00000528989 HOXA7P31268 230 aaPredicted RBP28.51■■■□□ 2.15
LDLRAD3-203ENST00000528989 CCL15Q16663 113 aa28.51■■■□□ 2.15
LDLRAD3-203ENST00000528989 FERMT3Q86UX7 667 aa28.51■■■□□ 2.15
LDLRAD3-203ENST00000528989 PCNTO95613 3336 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms