RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 ARMC5Q96C12 935 aa8.94□□□□□ -0.98
PCF11-202ENST00000528336 ZDHHC15Q96MV8 337 aa8.94□□□□□ -0.98
PCF11-202ENST00000528336 APBA2Q99767 749 aa8.94□□□□□ -0.98
PCF11-202ENST00000528336 FOXP3Q9BZS1 431 aa8.94□□□□□ -0.98
PCF11-202ENST00000528336 MBNL3Q9NUK0 354 aaKnown RBP8.94□□□□□ -0.98
PCF11-202ENST00000528336 WHRNQ9P202 907 aa8.94□□□□□ -0.98
PCF11-202ENST00000528336 FHOD1Q9Y613 1164 aa8.94□□□□□ -0.98
PCF11-202ENST00000528336 FKTNO75072 461 aa8.93□□□□□ -0.98
PCF11-202ENST00000528336 CTSKP43235 329 aa8.93□□□□□ -0.98
PCF11-202ENST00000528336 PCBP3P57721 371 aaKnown RBP8.93□□□□□ -0.98
PCF11-202ENST00000528336 MRM1Q6IN84 353 aaKnown RBP8.93□□□□□ -0.98
PCF11-202ENST00000528336 SLC23A3Q6PIS1 610 aa8.93□□□□□ -0.98
PCF11-202ENST00000528336 PRR13Q9NZ81 148 aa8.93□□□□□ -0.98
PCF11-202ENST00000528336 ADAMTS6Q9UKP5 1117 aa8.93□□□□□ -0.98
PCF11-202ENST00000528336 TCFL5Q9UL49 500 aa8.93□□□□□ -0.98
PCF11-202ENST00000528336 CCDC85CA6NKD9 419 aa8.92□□□□□ -0.98
PCF11-202ENST00000528336 H0Y8X5 98 aa8.92□□□□□ -0.98
PCF11-202ENST00000528336 RPL10P27635 214 aaKnown RBP8.92□□□□□ -0.98
PCF11-202ENST00000528336 ZNF792Q3KQV3 632 aa8.92□□□□□ -0.98
PCF11-202ENST00000528336 APEX2Q9UBZ4 518 aa8.92□□□□□ -0.98
PCF11-202ENST00000528336 DNAJC25-GNG10A0A024R161 153 aa8.91□□□□□ -0.98
PCF11-202ENST00000528336 A0A087WZG4 1122 aa8.91□□□□□ -0.98
PCF11-202ENST00000528336 GSNP06396 782 aa8.91□□□□□ -0.98
PCF11-202ENST00000528336 RNASE1P07998 156 aaKnown RBP8.91□□□□□ -0.98
PCF11-202ENST00000528336 NAT2P11245 290 aa8.91□□□□□ -0.98
PCF11-202ENST00000528336 TEKQ02763 1124 aa8.91□□□□□ -0.98
PCF11-202ENST00000528336 SV2CQ496J9 727 aa8.91□□□□□ -0.98
PCF11-202ENST00000528336 CWF19L1Q69YN2 538 aaKnown RBP8.91□□□□□ -0.98
PCF11-202ENST00000528336 RNF111Q6ZNA4 994 aa8.91□□□□□ -0.98
PCF11-202ENST00000528336 LINC00116Q8NCU8 138 aa8.91□□□□□ -0.98
PCF11-202ENST00000528336 DIS3Q9Y2L1 958 aaKnown RBP8.91□□□□□ -0.98
PCF11-202ENST00000528336 SF3B6Q9Y3B4 125 aaKnown RBP8.91□□□□□ -0.98
PCF11-202ENST00000528336 TTBK1Q5TCY1 1321 aaPredicted RBP8.9□□□□□ -0.98
PCF11-202ENST00000528336 SUSD5O60279 629 aa8.9□□□□□ -0.98
PCF11-202ENST00000528336 RALGPS1Q5JS13 557 aa8.9□□□□□ -0.98
PCF11-202ENST00000528336 ZPBP2Q6X784 338 aa8.9□□□□□ -0.98
PCF11-202ENST00000528336 SYTL4Q96C24 671 aaPredicted RBP8.9□□□□□ -0.98
PCF11-202ENST00000528336 ALPK1Q96QP1 1244 aa8.9□□□□□ -0.98
PCF11-202ENST00000528336 LGR4Q9BXB1 951 aa8.9□□□□□ -0.98
PCF11-202ENST00000528336 ADAMTS10Q9H324 1103 aa8.9□□□□□ -0.98
PCF11-202ENST00000528336 RC3H2Q9HBD1 1191 aaKnown RBP8.9□□□□□ -0.98
PCF11-202ENST00000528336 LRP2BPQ9P2M1 347 aa8.9□□□□□ -0.98
PCF11-202ENST00000528336 AKT3Q9Y243 479 aa8.9□□□□□ -0.98
PCF11-202ENST00000528336 VAMP4O75379 141 aa8.89□□□□□ -0.99
PCF11-202ENST00000528336 VAV1P15498 845 aa8.89□□□□□ -0.99
PCF11-202ENST00000528336 NBPF6Q5VWK0 638 aa8.89□□□□□ -0.99
PCF11-202ENST00000528336 EEPD1Q7L9B9 569 aa8.89□□□□□ -0.99
PCF11-202ENST00000528336 WAPLQ7Z5K2 1190 aa8.89□□□□□ -0.99
PCF11-202ENST00000528336 LRRN4CLQ8ND94 238 aa8.89□□□□□ -0.99
PCF11-202ENST00000528336 NBPF4Q96M43 638 aa8.89□□□□□ -0.99
PCF11-202ENST00000528336 USP35Q9P2H5 1018 aa8.89□□□□□ -0.99
PCF11-202ENST00000528336 CGGBP1Q9UFW8 167 aaPredicted RBP8.89□□□□□ -0.99
PCF11-202ENST00000528336 BMP8BP34820 402 aa8.88□□□□□ -0.99
PCF11-202ENST00000528336 ZNF143P52747 638 aaPredicted RBP8.88□□□□□ -0.99
PCF11-202ENST00000528336 HK2P52789 917 aa8.88□□□□□ -0.99
PCF11-202ENST00000528336 DPY19L1Q2PZI1 675 aa8.88□□□□□ -0.99
PCF11-202ENST00000528336 SOGA3Q5TF21 947 aa8.88□□□□□ -0.99
PCF11-202ENST00000528336 ARHGEF39Q8N4T4 335 aa8.88□□□□□ -0.99
PCF11-202ENST00000528336 ZNF513Q8N8E2 541 aaPredicted RBP8.88□□□□□ -0.99
PCF11-202ENST00000528336 UBXN4Q92575 508 aa8.88□□□□□ -0.99
PCF11-202ENST00000528336 CDADC1Q9BWV3 514 aa8.88□□□□□ -0.99
PCF11-202ENST00000528336 SIRPGQ9P1W8 387 aa8.88□□□□□ -0.99
PCF11-202ENST00000528336 ZMYM5Q9UJ78 669 aa8.88□□□□□ -0.99
PCF11-202ENST00000528336 NOP56O00567 594 aaKnown RBP8.87□□□□□ -0.99
PCF11-202ENST00000528336 CD3EP07766 207 aa8.87□□□□□ -0.99
PCF11-202ENST00000528336 GSTM1P09488 218 aa8.87□□□□□ -0.99
PCF11-202ENST00000528336 BVESQ8NE79 360 aa8.87□□□□□ -0.99
PCF11-202ENST00000528336 RCC1LQ96I51 464 aaKnown RBP8.87□□□□□ -0.99
PCF11-202ENST00000528336 TMEM82A0PJX8 343 aa8.86□□□□□ -0.99
PCF11-202ENST00000528336 ZNF205O95201 554 aa8.86□□□□□ -0.99
PCF11-202ENST00000528336 KCNH1O95259 989 aa8.86□□□□□ -0.99
PCF11-202ENST00000528336 NOP2P46087 812 aaKnown RBP8.86□□□□□ -0.99
PCF11-202ENST00000528336 POU4F1Q01851 419 aa8.86□□□□□ -0.99
PCF11-202ENST00000528336 SLC12A9Q9BXP2 914 aa8.86□□□□□ -0.99
PCF11-202ENST00000528336 ADGRE2Q9UHX3 823 aa8.86□□□□□ -0.99
PCF11-202ENST00000528336 TMEM59LQ9UK28 342 aa8.86□□□□□ -0.99
PCF11-202ENST00000528336 ITGAVP06756 1048 aa8.85□□□□□ -0.99
PCF11-202ENST00000528336 SERINC3Q13530 473 aa8.85□□□□□ -0.99
PCF11-202ENST00000528336 SLC10A6Q3KNW5 377 aa8.85□□□□□ -0.99
PCF11-202ENST00000528336 FCRL3Q96P31 734 aaPredicted RBP8.85□□□□□ -0.99
PCF11-202ENST00000528336 AP5S1Q9NUS5 200 aa8.85□□□□□ -0.99
PCF11-202ENST00000528336 GPR55Q9Y2T6 319 aaPredicted RBP8.85□□□□□ -0.99
PCF11-202ENST00000528336 EMC9Q9Y3B6 208 aa8.85□□□□□ -0.99
PCF11-202ENST00000528336 ZGLP1P0C6A0 271 aa8.84□□□□□ -0.99
PCF11-202ENST00000528336 IFNGR1P15260 489 aa8.84□□□□□ -0.99
PCF11-202ENST00000528336 ERVFC1P60507 584 aa8.84□□□□□ -0.99
PCF11-202ENST00000528336 AMPD2Q01433 879 aa8.84□□□□□ -0.99
PCF11-202ENST00000528336 RTP2Q5QGT7 225 aa8.84□□□□□ -0.99
PCF11-202ENST00000528336 POMZP3Q6PJE2 187 aa8.84□□□□□ -0.99
PCF11-202ENST00000528336 MCMBPQ9BTE3 642 aa8.84□□□□□ -0.99
PCF11-202ENST00000528336 C19orf73Q9NVV2 129 aa8.84□□□□□ -0.99
PCF11-202ENST00000528336 EBF1Q9UH73 591 aa8.84□□□□□ -0.99
PCF11-202ENST00000528336 CTNND2Q9UQB3 1225 aa8.84□□□□□ -0.99
PCF11-202ENST00000528336 MSRB2Q9Y3D2 182 aa8.84□□□□□ -0.99
PCF11-202ENST00000528336 STXBP3O00186 592 aa8.83□□□□□ -1
PCF11-202ENST00000528336 AGRPO00253 132 aa8.83□□□□□ -1
PCF11-202ENST00000528336 PDPK1O15530 556 aa8.83□□□□□ -1
PCF11-202ENST00000528336 GDNFP39905 211 aa8.83□□□□□ -1
PCF11-202ENST00000528336 IRAK1P51617 712 aa8.83□□□□□ -1
PCF11-202ENST00000528336 CRACR2BQ8N4Y2 399 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms