RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 PPP1R3GB7ZBB8 358 aa14.1□□□□□ -0.15
CAPN1-208ENST00000527323 TUBB4BP68371 445 aa14.1□□□□□ -0.15
CAPN1-208ENST00000527323 CT47A1Q5JQC4 288 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-208ENST00000527323 CDKAL1Q5VV42 579 aa14.1□□□□□ -0.15
CAPN1-208ENST00000527323 STAG1Q8WVM7 1258 aa14.1□□□□□ -0.15
CAPN1-208ENST00000527323 CCDC51Q96ER9 411 aa14.1□□□□□ -0.15
CAPN1-208ENST00000527323 RNF41Q9H4P4 317 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-208ENST00000527323 PSD3Q9NYI0 1048 aa14.1□□□□□ -0.15
CAPN1-208ENST00000527323 RAB21Q9UL25 225 aa14.1□□□□□ -0.15
CAPN1-208ENST00000527323 GUCA1BQ9UMX6 200 aa14.1□□□□□ -0.15
CAPN1-208ENST00000527323 TM4SF1P30408 202 aa14.1□□□□□ -0.15
CAPN1-208ENST00000527323 KRT9P35527 623 aa14.1□□□□□ -0.15
CAPN1-208ENST00000527323 EARS2Q5JPH6 523 aaKnown RBP14.1□□□□□ -0.15
CAPN1-208ENST00000527323 CYP26C1Q6V0L0 522 aa14.1□□□□□ -0.15
CAPN1-208ENST00000527323 MSANTD4Q8NCY6 345 aa14.1□□□□□ -0.15
CAPN1-208ENST00000527323 RASSF4Q9H2L5 321 aa14.1□□□□□ -0.15
CAPN1-208ENST00000527323 MAPK8IP1Q9UQF2 711 aa14.1□□□□□ -0.15
CAPN1-208ENST00000527323 PNPLA7Q6ZV29 1317 aa14.1□□□□□ -0.15
CAPN1-208ENST00000527323 PBX1P40424 430 aa14.09□□□□□ -0.15
CAPN1-208ENST00000527323 DPYDQ12882 1025 aa14.09□□□□□ -0.15
CAPN1-208ENST00000527323 SF3B2Q13435 895 aaKnown RBP14.09□□□□□ -0.15
CAPN1-208ENST00000527323 KRT31Q15323 416 aa14.09□□□□□ -0.15
CAPN1-208ENST00000527323 BRMS1Q9HCU9 246 aa14.09□□□□□ -0.15
CAPN1-208ENST00000527323 LCMT1Q9UIC8 334 aa14.09□□□□□ -0.15
CAPN1-208ENST00000527323 MYO1CO00159 1063 aa14.09□□□□□ -0.15
CAPN1-208ENST00000527323 TRIM66O15016 1216 aa14.09□□□□□ -0.15
CAPN1-208ENST00000527323 CASP8Q14790 479 aa14.09□□□□□ -0.15
CAPN1-208ENST00000527323 WHAMMP3Q1A5X7 153 aa14.09□□□□□ -0.15
CAPN1-208ENST00000527323 SLC27A3Q5K4L6 730 aa14.09□□□□□ -0.15
CAPN1-208ENST00000527323 NHSQ6T4R5 1651 aa14.09□□□□□ -0.15
CAPN1-208ENST00000527323 POLRMTO00411 1230 aaKnown RBP14.09□□□□□ -0.15
CAPN1-208ENST00000527323 GNAT2P19087 354 aa14.09□□□□□ -0.15
CAPN1-208ENST00000527323 USP5P45974 858 aa14.09□□□□□ -0.15
CAPN1-208ENST00000527323 ERVK-24P63145 666 aa14.09□□□□□ -0.15
CAPN1-208ENST00000527323 NCAPH2Q6IBW4 605 aa14.09□□□□□ -0.15
CAPN1-208ENST00000527323 FERMT2Q96AC1 680 aa14.09□□□□□ -0.15
CAPN1-208ENST00000527323 ACBD3Q9H3P7 528 aa14.09□□□□□ -0.15
CAPN1-208ENST00000527323 ABHD10Q9NUJ1 306 aa14.09□□□□□ -0.15
CAPN1-208ENST00000527323 MYO6Q9UM54 1294 aa14.09□□□□□ -0.15
CAPN1-208ENST00000527323 BRD2P25440 801 aaKnown RBP14.08□□□□□ -0.16
CAPN1-208ENST00000527323 GOLGA6L1Q8N7Z2 621 aa14.08□□□□□ -0.16
CAPN1-208ENST00000527323 NOA1Q8NC60 698 aaKnown RBP14.08□□□□□ -0.16
CAPN1-208ENST00000527323 ESR2Q92731 530 aa14.08□□□□□ -0.16
CAPN1-208ENST00000527323 RNF26Q9BY78 433 aaPredicted RBP14.08□□□□□ -0.16
CAPN1-208ENST00000527323 TNKSO95271 1327 aa14.08□□□□□ -0.16
CAPN1-208ENST00000527323 C6orf229H3BNL8 230 aa14.08□□□□□ -0.16
CAPN1-208ENST00000527323 SEMA3EO15041 775 aa14.08□□□□□ -0.16
CAPN1-208ENST00000527323 COPB1P53618 953 aaKnown RBP14.08□□□□□ -0.16
CAPN1-208ENST00000527323 UBXN1Q04323 297 aa14.08□□□□□ -0.16
CAPN1-208ENST00000527323 PPARAQ07869 468 aa14.08□□□□□ -0.16
CAPN1-208ENST00000527323 PTGDRQ13258 359 aa14.08□□□□□ -0.16
CAPN1-208ENST00000527323 TSR1Q2NL82 804 aaKnown RBP14.08□□□□□ -0.16
CAPN1-208ENST00000527323 SH3RF1Q7Z6J0 888 aa14.08□□□□□ -0.16
CAPN1-208ENST00000527323 IQUBQ8NA54 791 aa14.08□□□□□ -0.16
CAPN1-208ENST00000527323 CCDC148Q8NFR7 591 aa14.08□□□□□ -0.16
CAPN1-208ENST00000527323 MXD3Q9BW11 206 aa14.08□□□□□ -0.16
CAPN1-208ENST00000527323 COL5A3P25940 1745 aaPredicted RBP14.08□□□□□ -0.16
CAPN1-208ENST00000527323 F8W031 263 aaPredicted RBP14.07□□□□□ -0.16
CAPN1-208ENST00000527323 RNF225M0QZC1 329 aaPredicted RBP14.07□□□□□ -0.16
CAPN1-208ENST00000527323 EVX2Q03828 476 aa14.07□□□□□ -0.16
CAPN1-208ENST00000527323 TTC38Q5R3I4 469 aa14.07□□□□□ -0.16
CAPN1-208ENST00000527323 SDR42E1Q8WUS8 393 aa14.07□□□□□ -0.16
CAPN1-208ENST00000527323 AKT1S1Q96B36 256 aa14.07□□□□□ -0.16
CAPN1-208ENST00000527323 NYXQ9GZU5 481 aa14.07□□□□□ -0.16
CAPN1-208ENST00000527323 BMP15O95972 392 aa14.07□□□□□ -0.16
CAPN1-208ENST00000527323 IVLP07476 585 aa14.07□□□□□ -0.16
CAPN1-208ENST00000527323 CYP7A1P22680 504 aa14.07□□□□□ -0.16
CAPN1-208ENST00000527323 NOM1Q5C9Z4 860 aaKnown RBP14.07□□□□□ -0.16
CAPN1-208ENST00000527323 CATIPQ7Z7H3 387 aa14.07□□□□□ -0.16
CAPN1-208ENST00000527323 RRP15Q9Y3B9 282 aaKnown RBP14.07□□□□□ -0.16
CAPN1-208ENST00000527323 KCNJ18B7U540 433 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 WNT7AO00755 349 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 ENC1O14682 589 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 SPAG1Q07617 926 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 SLC20A2Q08357 652 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 PAK1Q13153 545 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 KCNJ12Q14500 433 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 SKIDA1Q1XH10 827 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 NELFBQ8WX92 580 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 CHP1Q99653 195 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 EPN1Q9Y6I3 576 aaPredicted RBP14.06□□□□□ -0.16
CAPN1-208ENST00000527323 MROH5Q6ZUA9 1318 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 GRIK5Q16478 980 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 IFIT1BQ5T764 474 aaKnown RBP14.06□□□□□ -0.16
CAPN1-208ENST00000527323 TRIM10Q9UDY6 481 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 RSPH14Q9UHP6 348 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 MYO5AQ9Y4I1 1855 aaKnown RBP14.06□□□□□ -0.16
CAPN1-208ENST00000527323 ITIH6Q6UXX5 1313 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 PLEKHA8P1O95397 391 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 TUBBP07437 444 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 ARHGAP25P42331 645 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 DOK7Q18PE1 504 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 CAMKK2Q96RR4 588 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 PHF20Q9BVI0 1012 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 MYO1AQ9UBC5 1043 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 LIMA1Q9UHB6 759 aaKnown RBP14.06□□□□□ -0.16
CAPN1-208ENST00000527323 TAF1LQ8IZX4 1826 aa14.06□□□□□ -0.16
CAPN1-208ENST00000527323 PLSCR1O15162 318 aa14.05□□□□□ -0.16
CAPN1-208ENST00000527323 MCM7P33993 719 aa14.05□□□□□ -0.16
CAPN1-208ENST00000527323 SF3B3Q15393 1217 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms