RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 FAM182BQ5T319 152 aa23.05■■□□□ 1.28
SMIM3-201ENST00000526627 NAA15Q9BXJ9 866 aaKnown RBP23.05■■□□□ 1.28
SMIM3-201ENST00000526627 RTFDC1Q9BY42 306 aaPredicted RBP23.05■■□□□ 1.28
SMIM3-201ENST00000526627 GTPBP4Q9BZE4 634 aaKnown RBP23.05■■□□□ 1.28
SMIM3-201ENST00000526627 TSPY3P0CV98 308 aa23.04■■□□□ 1.28
SMIM3-201ENST00000526627 TSPY8P0CW00 308 aa23.04■■□□□ 1.28
SMIM3-201ENST00000526627 RASA1P20936 1047 aa23.04■■□□□ 1.28
SMIM3-201ENST00000526627 FXR1P51114 621 aaKnown RBP eCLIP23.04■■□□□ 1.28
SMIM3-201ENST00000526627 GSTO1P78417 241 aa23.04■■□□□ 1.28
SMIM3-201ENST00000526627 PAK1Q13153 545 aa23.04■■□□□ 1.28
SMIM3-201ENST00000526627 TMEM47Q9BQJ4 181 aa23.04■■□□□ 1.28
SMIM3-201ENST00000526627 GDAQ9Y2T3 454 aa23.04■■□□□ 1.28
SMIM3-201ENST00000526627 MRFAP1Q9Y605 127 aa23.04■■□□□ 1.28
SMIM3-201ENST00000526627 CDK5RAP2Q96SN8 1893 aa23.04■■□□□ 1.28
SMIM3-201ENST00000526627 CASP14P31944 242 aa23.04■■□□□ 1.28
SMIM3-201ENST00000526627 CCT6AP40227 531 aaKnown RBP23.04■■□□□ 1.28
SMIM3-201ENST00000526627 CCDC178Q5BJE1 867 aa23.04■■□□□ 1.28
SMIM3-201ENST00000526627 C15orf52Q6ZUT6 534 aaKnown RBP23.04■■□□□ 1.28
SMIM3-201ENST00000526627 MNS1Q8NEH6 495 aa23.04■■□□□ 1.28
SMIM3-201ENST00000526627 NELFBQ8WX92 580 aa23.04■■□□□ 1.28
SMIM3-201ENST00000526627 UBXN4Q92575 508 aa23.04■■□□□ 1.28
SMIM3-201ENST00000526627 DISC1Q9NRI5 854 aa23.04■■□□□ 1.28
SMIM3-201ENST00000526627 BARHL2Q9NY43 387 aa23.04■■□□□ 1.28
SMIM3-201ENST00000526627 LY75O60449 1722 aa23.03■■□□□ 1.28
SMIM3-201ENST00000526627 A0A0U1RQJ8 604 aa23.03■■□□□ 1.28
SMIM3-201ENST00000526627 EFCAB8A8MWE9 144 aa23.03■■□□□ 1.28
SMIM3-201ENST00000526627 BAG3O95817 575 aa23.03■■□□□ 1.28
SMIM3-201ENST00000526627 CCDC175P0C221 793 aa23.03■■□□□ 1.28
SMIM3-201ENST00000526627 ATRIPQ8WXE1 791 aa23.03■■□□□ 1.28
SMIM3-201ENST00000526627 CCDC194A0A1B0GVG4 234 aa23.03■■□□□ 1.28
SMIM3-201ENST00000526627 PP2D1A8MPX8 630 aa23.03■■□□□ 1.28
SMIM3-201ENST00000526627 STAT6P42226 847 aa23.03■■□□□ 1.28
SMIM3-201ENST00000526627 PRCPP42785 496 aa23.03■■□□□ 1.28
SMIM3-201ENST00000526627 MAPKAPK5Q8IW41 473 aa23.03■■□□□ 1.28
SMIM3-201ENST00000526627 SNED1Q8TER0 1413 aa23.03■■□□□ 1.28
SMIM3-201ENST00000526627 IRX2Q9BZI1 471 aaPredicted RBP23.03■■□□□ 1.28
SMIM3-201ENST00000526627 RMND1Q9NWS8 449 aa23.03■■□□□ 1.28
SMIM3-201ENST00000526627 SAP30BPQ9UHR5 308 aaKnown RBP23.03■■□□□ 1.28
SMIM3-201ENST00000526627 COPB1P53618 953 aaKnown RBP23.02■■□□□ 1.28
SMIM3-201ENST00000526627 INF2Q27J81 1249 aa23.02■■□□□ 1.28
SMIM3-201ENST00000526627 RASGRP2Q7LDG7 609 aa23.02■■□□□ 1.28
SMIM3-201ENST00000526627 ZNF444Q8N0Y2 327 aaPredicted RBP23.02■■□□□ 1.28
SMIM3-201ENST00000526627 KRT222Q8N1A0 295 aa23.02■■□□□ 1.28
SMIM3-201ENST00000526627 RFC4P35249 363 aa23.02■■□□□ 1.28
SMIM3-201ENST00000526627 TXLNAP40222 546 aa23.02■■□□□ 1.28
SMIM3-201ENST00000526627 TCP11X2Q5H9J9 407 aa23.02■■□□□ 1.28
SMIM3-201ENST00000526627 GALNT17Q6IS24 598 aa23.02■■□□□ 1.28
SMIM3-201ENST00000526627 HEATR3Q7Z4Q2 680 aa23.02■■□□□ 1.28
SMIM3-201ENST00000526627 ZNF804AQ7Z570 1209 aa23.02■■□□□ 1.28
SMIM3-201ENST00000526627 LRRC15Q8TF66 581 aa23.02■■□□□ 1.28
SMIM3-201ENST00000526627 THSD7AQ9UPZ6 1657 aa23.01■■□□□ 1.27
SMIM3-201ENST00000526627 RNF225M0QZC1 329 aaPredicted RBP23.01■■□□□ 1.27
SMIM3-201ENST00000526627 DTHD1Q6ZMT9 781 aa23.01■■□□□ 1.27
SMIM3-201ENST00000526627 CCDC148Q8NFR7 591 aa23.01■■□□□ 1.27
SMIM3-201ENST00000526627 TAB2Q9NYJ8 693 aa23.01■■□□□ 1.27
SMIM3-201ENST00000526627 DDX60LQ5H9U9 1706 aaKnown RBP23.01■■□□□ 1.27
SMIM3-201ENST00000526627 N4BP3O15049 544 aa23■■□□□ 1.27
SMIM3-201ENST00000526627 GPSM2P81274 684 aa23■■□□□ 1.27
SMIM3-201ENST00000526627 IRF2BP1Q8IU81 584 aa23■■□□□ 1.27
SMIM3-201ENST00000526627 CNGA4Q8IV77 575 aa23■■□□□ 1.27
SMIM3-201ENST00000526627 AMOTL1Q8IY63 956 aa23■■□□□ 1.27
SMIM3-201ENST00000526627 CCDC51Q96ER9 411 aa23■■□□□ 1.27
SMIM3-201ENST00000526627 VPS16Q9H269 839 aa23■■□□□ 1.27
SMIM3-201ENST00000526627 MAPK8IP1Q9UQF2 711 aa23■■□□□ 1.27
SMIM3-201ENST00000526627 MTMR7Q9Y216 660 aa23■■□□□ 1.27
SMIM3-201ENST00000526627 KCNJ18B7U540 433 aa23■■□□□ 1.27
SMIM3-201ENST00000526627 KLRC4O43908 158 aa23■■□□□ 1.27
SMIM3-201ENST00000526627 LDHCP07864 332 aa23■■□□□ 1.27
SMIM3-201ENST00000526627 GOLGA8HP0CJ92 632 aa23■■□□□ 1.27
SMIM3-201ENST00000526627 SPAG1Q07617 926 aa23■■□□□ 1.27
SMIM3-201ENST00000526627 KCNJ12Q14500 433 aa23■■□□□ 1.27
SMIM3-201ENST00000526627 TRAPPC3LQ5T215 181 aa23■■□□□ 1.27
SMIM3-201ENST00000526627 ADSSL1Q8N142 457 aa23■■□□□ 1.27
SMIM3-201ENST00000526627 FNBP4Q8N3X1 1017 aaPredicted RBP23■■□□□ 1.27
SMIM3-201ENST00000526627 CCSER1Q9C0I3 900 aa23■■□□□ 1.27
SMIM3-201ENST00000526627 STX8Q9UNK0 236 aa23■■□□□ 1.27
SMIM3-201ENST00000526627 FHOD1Q9Y613 1164 aa23■■□□□ 1.27
SMIM3-201ENST00000526627 CNBD1Q8NA66 436 aa22.99■■□□□ 1.27
SMIM3-201ENST00000526627 CPVLQ9H3G5 476 aa22.99■■□□□ 1.27
SMIM3-201ENST00000526627 BTDP43251 543 aa22.99■■□□□ 1.27
SMIM3-201ENST00000526627 PPP2R3AQ06190 1150 aa22.99■■□□□ 1.27
SMIM3-201ENST00000526627 CD209Q9NNX6 404 aa22.99■■□□□ 1.27
SMIM3-201ENST00000526627 LZTFL1Q9NQ48 299 aa22.99■■□□□ 1.27
SMIM3-201ENST00000526627 MYH8P13535 1937 aa22.98■■□□□ 1.27
SMIM3-201ENST00000526627 ZRANB2O95218 330 aaKnown RBP eCLIP22.98■■□□□ 1.27
SMIM3-201ENST00000526627 ERVK-24P63145 666 aa22.98■■□□□ 1.27
SMIM3-201ENST00000526627 C16orf86Q6ZW13 317 aa22.98■■□□□ 1.27
SMIM3-201ENST00000526627 RSRC2Q7L4I2 434 aaKnown RBP22.98■■□□□ 1.27
SMIM3-201ENST00000526627 LZTS2Q9BRK4 669 aa22.98■■□□□ 1.27
SMIM3-201ENST00000526627 SPZ1Q9BXG8 430 aa22.98■■□□□ 1.27
SMIM3-201ENST00000526627 KBTBD4Q9NVX7 518 aa22.98■■□□□ 1.27
SMIM3-201ENST00000526627 GPR75-ASB3A0A0A6YYF3 556 aa22.98■■□□□ 1.27
SMIM3-201ENST00000526627 KLRF2D3W0D1 207 aa22.98■■□□□ 1.27
SMIM3-201ENST00000526627 CDK8P49336 464 aa22.98■■□□□ 1.27
SMIM3-201ENST00000526627 PMS1P54277 932 aaKnown RBP22.98■■□□□ 1.27
SMIM3-201ENST00000526627 GABPB1Q06547 395 aaPredicted RBP22.98■■□□□ 1.27
SMIM3-201ENST00000526627 KCNB1Q14721 858 aa22.98■■□□□ 1.27
SMIM3-201ENST00000526627 PRR5LQ6MZQ0 368 aa22.98■■□□□ 1.27
SMIM3-201ENST00000526627 ZMYND12Q9H0C1 365 aa22.98■■□□□ 1.27
SMIM3-201ENST00000526627 EPC1Q9H2F5 836 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms