RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 FBXW10Q5XX13 1052 aa6.42□□□□□ -1.38
SQLE-204ENST00000520493 ZNF654Q8IZM8 581 aa6.42□□□□□ -1.38
SQLE-204ENST00000520493 SPATA32Q96LK8 384 aa6.42□□□□□ -1.38
SQLE-204ENST00000520493 SLC6A18Q96N87 628 aa6.42□□□□□ -1.38
SQLE-204ENST00000520493 EPB41L4BQ9H329 900 aa6.42□□□□□ -1.38
SQLE-204ENST00000520493 DCP1AQ9NPI6 582 aaPredicted RBP6.42□□□□□ -1.38
SQLE-204ENST00000520493 ZMYM5Q9UJ78 669 aa6.42□□□□□ -1.38
SQLE-204ENST00000520493 PCDHB12Q9Y5F1 795 aa6.42□□□□□ -1.38
SQLE-204ENST00000520493 SIGLEC6O43699 453 aa6.41□□□□□ -1.38
SQLE-204ENST00000520493 ENDOUP21128 410 aaKnown RBP6.41□□□□□ -1.38
SQLE-204ENST00000520493 RPL10P27635 214 aaKnown RBP6.41□□□□□ -1.38
SQLE-204ENST00000520493 ERVFC1P60507 584 aa6.41□□□□□ -1.38
SQLE-204ENST00000520493 NR0B2Q15466 257 aa6.41□□□□□ -1.38
SQLE-204ENST00000520493 INTS3Q68E01 1043 aaKnown RBP6.41□□□□□ -1.38
SQLE-204ENST00000520493 TMC3Q7Z5M5 1100 aa6.41□□□□□ -1.38
SQLE-204ENST00000520493 ZNF512BQ96KM6 892 aaPredicted RBP6.41□□□□□ -1.38
SQLE-204ENST00000520493 TM9SF2Q99805 663 aa6.41□□□□□ -1.38
SQLE-204ENST00000520493 SLC6A17Q9H1V8 727 aa6.41□□□□□ -1.38
SQLE-204ENST00000520493 ANTXR1Q9H6X2 564 aa6.41□□□□□ -1.38
SQLE-204ENST00000520493 CWC22Q9HCG8 908 aaKnown RBP6.41□□□□□ -1.38
SQLE-204ENST00000520493 DDX41Q9UJV9 622 aaKnown RBP6.41□□□□□ -1.38
SQLE-204ENST00000520493 FBXL21Q9UKT6 434 aa6.41□□□□□ -1.38
SQLE-204ENST00000520493 TCFL5Q9UL49 500 aa6.41□□□□□ -1.38
SQLE-204ENST00000520493 PRAMEF1O95521 474 aa6.4□□□□□ -1.38
SQLE-204ENST00000520493 MED14OSP0DP75 135 aa6.4□□□□□ -1.38
SQLE-204ENST00000520493 COL9A2Q14055 689 aaPredicted RBP6.4□□□□□ -1.38
SQLE-204ENST00000520493 WAPLQ7Z5K2 1190 aa6.4□□□□□ -1.38
SQLE-204ENST00000520493 KCNN1Q92952 543 aa6.4□□□□□ -1.38
SQLE-204ENST00000520493 TCTN2Q96GX1 697 aa6.4□□□□□ -1.38
SQLE-204ENST00000520493 FOXP3Q9BZS1 431 aa6.4□□□□□ -1.38
SQLE-204ENST00000520493 PRDM14Q9GZV8 571 aa6.4□□□□□ -1.38
SQLE-204ENST00000520493 CHST7Q9NS84 486 aa6.4□□□□□ -1.38
SQLE-204ENST00000520493 SYPP08247 313 aa6.39□□□□□ -1.39
SQLE-204ENST00000520493 TRHRP34981 398 aaPredicted RBP6.39□□□□□ -1.39
SQLE-204ENST00000520493 NFKB2Q00653 900 aa6.39□□□□□ -1.39
SQLE-204ENST00000520493 SNX17Q15036 470 aa6.39□□□□□ -1.39
SQLE-204ENST00000520493 TMEM192Q8IY95 271 aa6.39□□□□□ -1.39
SQLE-204ENST00000520493 TAB3Q8N5C8 712 aaPredicted RBP6.39□□□□□ -1.39
SQLE-204ENST00000520493 LINC00116Q8NCU8 138 aa6.39□□□□□ -1.39
SQLE-204ENST00000520493 SMARCC1Q92922 1105 aaPredicted RBP6.39□□□□□ -1.39
SQLE-204ENST00000520493 CRBNQ96SW2 442 aa6.39□□□□□ -1.39
SQLE-204ENST00000520493 SLC9A7Q96T83 725 aa6.39□□□□□ -1.39
SQLE-204ENST00000520493 RNF32Q9H0A6 362 aa6.39□□□□□ -1.39
SQLE-204ENST00000520493 C19orf44Q9H6X5 657 aa6.39□□□□□ -1.39
SQLE-204ENST00000520493 PRR13Q9NZ81 148 aa6.39□□□□□ -1.39
SQLE-204ENST00000520493 SUCOQ9UBS9 1254 aaKnown RBP6.39□□□□□ -1.39
SQLE-204ENST00000520493 GPR160Q9UJ42 338 aa6.39□□□□□ -1.39
SQLE-204ENST00000520493 FAM86C2PA6NEL3 165 aa6.38□□□□□ -1.39
SQLE-204ENST00000520493 IGSF3O75054 1194 aa6.38□□□□□ -1.39
SQLE-204ENST00000520493 GLDCP23378 1020 aa6.38□□□□□ -1.39
SQLE-204ENST00000520493 ZC3H6P61129 1189 aaKnown RBP6.38□□□□□ -1.39
SQLE-204ENST00000520493 SNW1Q13573 536 aaKnown RBP6.38□□□□□ -1.39
SQLE-204ENST00000520493 AUHQ13825 339 aaKnown RBP6.38□□□□□ -1.39
SQLE-204ENST00000520493 SLC14A2Q15849 920 aa6.38□□□□□ -1.39
SQLE-204ENST00000520493 SKOR2Q2VWA4 1001 aaPredicted RBP6.38□□□□□ -1.39
SQLE-204ENST00000520493 IRF2BP1Q8IU81 584 aa6.38□□□□□ -1.39
SQLE-204ENST00000520493 CCDC144CPQ8IYA2 1237 aa6.38□□□□□ -1.39
SQLE-204ENST00000520493 USHBP1Q8N6Y0 703 aa6.38□□□□□ -1.39
SQLE-204ENST00000520493 DSCC1Q9BVC3 393 aa6.38□□□□□ -1.39
SQLE-204ENST00000520493 FKTNO75072 461 aa6.37□□□□□ -1.39
SQLE-204ENST00000520493 KIR2DL1P43626 348 aaPredicted RBP6.37□□□□□ -1.39
SQLE-204ENST00000520493 KIR2DL2P43627 348 aaPredicted RBP6.37□□□□□ -1.39
SQLE-204ENST00000520493 RACK1P63244 317 aaKnown RBP6.37□□□□□ -1.39
SQLE-204ENST00000520493 PAK2Q13177 524 aa6.37□□□□□ -1.39
SQLE-204ENST00000520493 BBS9Q3SYG4 887 aa6.37□□□□□ -1.39
SQLE-204ENST00000520493 LINC01599Q8WXQ3 324 aa6.37□□□□□ -1.39
SQLE-204ENST00000520493 MAP6Q96JE9 813 aa6.37□□□□□ -1.39
SQLE-204ENST00000520493 SLC26A8Q96RN1 970 aa6.37□□□□□ -1.39
SQLE-204ENST00000520493 GFOD1Q9NXC2 390 aa6.37□□□□□ -1.39
SQLE-204ENST00000520493 PPT2Q9UMR5 302 aa6.37□□□□□ -1.39
SQLE-204ENST00000520493 MEIS1O00470 390 aa6.36□□□□□ -1.39
SQLE-204ENST00000520493 GUCY2CP25092 1073 aa6.36□□□□□ -1.39
SQLE-204ENST00000520493 PDE6BP35913 854 aa6.36□□□□□ -1.39
SQLE-204ENST00000520493 PMS1P54277 932 aaKnown RBP6.36□□□□□ -1.39
SQLE-204ENST00000520493 CWF19L1Q69YN2 538 aaKnown RBP6.36□□□□□ -1.39
SQLE-204ENST00000520493 C7orf61Q8IZ16 206 aa6.36□□□□□ -1.39
SQLE-204ENST00000520493 RBBP8NLQ8NC74 664 aaPredicted RBP6.36□□□□□ -1.39
SQLE-204ENST00000520493 GPRASP2Q96D09 838 aa6.36□□□□□ -1.39
SQLE-204ENST00000520493 BORCS6Q96GS4 357 aa6.36□□□□□ -1.39
SQLE-204ENST00000520493 INTS4Q96HW7 963 aaKnown RBP6.36□□□□□ -1.39
SQLE-204ENST00000520493 YBX2Q9Y2T7 364 aaKnown RBP6.36□□□□□ -1.39
SQLE-204ENST00000520493 ZNF281Q9Y2X9 895 aa6.36□□□□□ -1.39
SQLE-204ENST00000520493 SLC12A7Q9Y666 1083 aa6.36□□□□□ -1.39
SQLE-204ENST00000520493 USP2O75604 605 aaPredicted RBP6.35□□□□□ -1.39
SQLE-204ENST00000520493 ACRP10323 421 aa6.35□□□□□ -1.39
SQLE-204ENST00000520493 BMP8BP34820 402 aa6.35□□□□□ -1.39
SQLE-204ENST00000520493 TIGD5Q53EQ6 642 aa6.35□□□□□ -1.39
SQLE-204ENST00000520493 NOL9Q5SY16 702 aaKnown RBP6.35□□□□□ -1.39
SQLE-204ENST00000520493 CEP128Q6ZU80 1094 aa6.35□□□□□ -1.39
SQLE-204ENST00000520493 NT5DC4Q86YG4 428 aa6.35□□□□□ -1.39
SQLE-204ENST00000520493 FCRL2Q96LA5 508 aaPredicted RBP6.35□□□□□ -1.39
SQLE-204ENST00000520493 SP110Q9HB58 689 aa6.35□□□□□ -1.39
SQLE-204ENST00000520493 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.35□□□□□ -1.39
SQLE-204ENST00000520493 SHROOM4Q9ULL8 1493 aa6.34□□□□□ -1.39
SQLE-204ENST00000520493 TMEM82A0PJX8 343 aa6.34□□□□□ -1.39
SQLE-204ENST00000520493 GSNP06396 782 aa6.34□□□□□ -1.39
SQLE-204ENST00000520493 ADRB1P08588 477 aa6.34□□□□□ -1.39
SQLE-204ENST00000520493 METTL16Q86W50 562 aaKnown RBP6.34□□□□□ -1.39
SQLE-204ENST00000520493 LSRQ86X29 649 aaPredicted RBP6.34□□□□□ -1.39
SQLE-204ENST00000520493 OR6P1Q8NGX9 317 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms