RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 SV2CQ496J9 727 aa8.14□□□□□ -1.11
NPM1-206ENST00000519955 ZMYM1Q5SVZ6 1142 aa8.14□□□□□ -1.11
NPM1-206ENST00000519955 CRACR2BQ8N4Y2 399 aaPredicted RBP8.14□□□□□ -1.11
NPM1-206ENST00000519955 FIBCD1Q8N539 461 aa8.14□□□□□ -1.11
NPM1-206ENST00000519955 ZNF513Q8N8E2 541 aaPredicted RBP8.14□□□□□ -1.11
NPM1-206ENST00000519955 BRF1Q92994 677 aa8.14□□□□□ -1.11
NPM1-206ENST00000519955 ATP13A1Q9HD20 1204 aa8.14□□□□□ -1.11
NPM1-206ENST00000519955 APEX2Q9UBZ4 518 aa8.14□□□□□ -1.11
NPM1-206ENST00000519955 IQCA1LA6NCM1 817 aa8.13□□□□□ -1.11
NPM1-206ENST00000519955 GSNP06396 782 aa8.13□□□□□ -1.11
NPM1-206ENST00000519955 MTERF2Q49AM1 385 aa8.13□□□□□ -1.11
NPM1-206ENST00000519955 POMZP3Q6PJE2 187 aa8.13□□□□□ -1.11
NPM1-206ENST00000519955 ARHGEF39Q8N4T4 335 aa8.13□□□□□ -1.11
NPM1-206ENST00000519955 BVESQ8NE79 360 aa8.13□□□□□ -1.11
NPM1-206ENST00000519955 ADCY4Q8NFM4 1077 aa8.13□□□□□ -1.11
NPM1-206ENST00000519955 TCTN2Q96GX1 697 aa8.13□□□□□ -1.11
NPM1-206ENST00000519955 NOL6Q9H6R4 1146 aaKnown RBP8.13□□□□□ -1.11
NPM1-206ENST00000519955 CCDC39Q9UFE4 941 aa8.13□□□□□ -1.11
NPM1-206ENST00000519955 DUSP13Q9UII6 198 aa8.13□□□□□ -1.11
NPM1-206ENST00000519955 FAM221BA6H8Z2 402 aa8.12□□□□□ -1.11
NPM1-206ENST00000519955 NOP56O00567 594 aaKnown RBP8.12□□□□□ -1.11
NPM1-206ENST00000519955 IKZF1Q13422 519 aa8.12□□□□□ -1.11
NPM1-206ENST00000519955 CWF19L1Q69YN2 538 aaKnown RBP8.12□□□□□ -1.11
NPM1-206ENST00000519955 PPP1R14AQ96A00 147 aa8.12□□□□□ -1.11
NPM1-206ENST00000519955 SGSM3Q96HU1 749 aa8.12□□□□□ -1.11
NPM1-206ENST00000519955 PCMTD2Q9NV79 361 aa8.12□□□□□ -1.11
NPM1-206ENST00000519955 LMCD1Q9NZU5 365 aa8.12□□□□□ -1.11
NPM1-206ENST00000519955 LRP2BPQ9P2M1 347 aa8.12□□□□□ -1.11
NPM1-206ENST00000519955 CGGBP1Q9UFW8 167 aaPredicted RBP8.12□□□□□ -1.11
NPM1-206ENST00000519955 ANGEL1Q9UNK9 670 aaKnown RBP8.12□□□□□ -1.11
NPM1-206ENST00000519955 WASH4PA8MWX3 477 aa8.11□□□□□ -1.11
NPM1-206ENST00000519955 MEIS1O00470 390 aa8.11□□□□□ -1.11
NPM1-206ENST00000519955 LTKP29376 864 aa8.11□□□□□ -1.11
NPM1-206ENST00000519955 BMP8BP34820 402 aa8.11□□□□□ -1.11
NPM1-206ENST00000519955 PCBP3P57721 371 aaKnown RBP8.11□□□□□ -1.11
NPM1-206ENST00000519955 BNIP3Q12983 259 aa8.11□□□□□ -1.11
NPM1-206ENST00000519955 GRB10Q13322 594 aa8.11□□□□□ -1.11
NPM1-206ENST00000519955 LRP8Q14114 963 aa8.11□□□□□ -1.11
NPM1-206ENST00000519955 ANGEL2Q5VTE6 544 aaKnown RBP8.11□□□□□ -1.11
NPM1-206ENST00000519955 RNF111Q6ZNA4 994 aa8.11□□□□□ -1.11
NPM1-206ENST00000519955 CREG2Q8IUH2 290 aa8.11□□□□□ -1.11
NPM1-206ENST00000519955 LRRN4CLQ8ND94 238 aa8.11□□□□□ -1.11
NPM1-206ENST00000519955 PIF1Q9H611 641 aa8.11□□□□□ -1.11
NPM1-206ENST00000519955 MINPP1Q9UNW1 487 aa8.11□□□□□ -1.11
NPM1-206ENST00000519955 AKT3Q9Y243 479 aa8.11□□□□□ -1.11
NPM1-206ENST00000519955 EMC9Q9Y3B6 208 aa8.11□□□□□ -1.11
NPM1-206ENST00000519955 SSU72P8A0A1W2PR75 194 aa8.1□□□□□ -1.11
NPM1-206ENST00000519955 ESR1P03372 595 aa8.1□□□□□ -1.11
NPM1-206ENST00000519955 CTSKP43235 329 aa8.1□□□□□ -1.11
NPM1-206ENST00000519955 POU4F1Q01851 419 aa8.1□□□□□ -1.11
NPM1-206ENST00000519955 PPP2R5DQ14738 602 aa8.1□□□□□ -1.11
NPM1-206ENST00000519955 NOP9Q86U38 636 aaKnown RBP8.1□□□□□ -1.11
NPM1-206ENST00000519955 LRRC47Q8N1G4 583 aaKnown RBP8.1□□□□□ -1.11
NPM1-206ENST00000519955 USHBP1Q8N6Y0 703 aa8.1□□□□□ -1.11
NPM1-206ENST00000519955 LINC00116Q8NCU8 138 aa8.1□□□□□ -1.11
NPM1-206ENST00000519955 FLCNQ8NFG4 579 aa8.1□□□□□ -1.11
NPM1-206ENST00000519955 ZDHHC15Q96MV8 337 aa8.1□□□□□ -1.11
NPM1-206ENST00000519955 ZMYM5Q9UJ78 669 aa8.1□□□□□ -1.11
NPM1-206ENST00000519955 H0Y8X5 98 aa8.09□□□□□ -1.11
NPM1-206ENST00000519955 ITGAVP06756 1048 aa8.09□□□□□ -1.11
NPM1-206ENST00000519955 CD8BP10966 210 aa8.09□□□□□ -1.11
NPM1-206ENST00000519955 ENDOUP21128 410 aaKnown RBP8.09□□□□□ -1.11
NPM1-206ENST00000519955 NOP2P46087 812 aaKnown RBP8.09□□□□□ -1.11
NPM1-206ENST00000519955 CRTC3Q6UUV7 619 aa8.09□□□□□ -1.11
NPM1-206ENST00000519955 ZNF227Q86WZ6 799 aa8.09□□□□□ -1.11
NPM1-206ENST00000519955 TRIM59Q8IWR1 403 aa8.09□□□□□ -1.11
NPM1-206ENST00000519955 DNAJC7Q99615 494 aa8.09□□□□□ -1.11
NPM1-206ENST00000519955 TCFL5Q9UL49 500 aa8.09□□□□□ -1.11
NPM1-206ENST00000519955 PCDHA11Q9Y5I1 949 aa8.09□□□□□ -1.11
NPM1-206ENST00000519955 WNT11O96014 354 aa8.08□□□□□ -1.12
NPM1-206ENST00000519955 SYPP08247 313 aa8.08□□□□□ -1.12
NPM1-206ENST00000519955 CD96P40200 585 aa8.08□□□□□ -1.12
NPM1-206ENST00000519955 AMPD2Q01433 879 aa8.08□□□□□ -1.12
NPM1-206ENST00000519955 EGR3Q06889 387 aa8.08□□□□□ -1.12
NPM1-206ENST00000519955 SSRP1Q08945 709 aaKnown RBP8.08□□□□□ -1.12
NPM1-206ENST00000519955 SPATC1Q76KD6 591 aa8.08□□□□□ -1.12
NPM1-206ENST00000519955 SPRED2Q7Z698 418 aa8.08□□□□□ -1.12
NPM1-206ENST00000519955 WFDC3Q8IUB2 231 aa8.08□□□□□ -1.12
NPM1-206ENST00000519955 MRGPRX3Q96LB0 322 aa8.08□□□□□ -1.12
NPM1-206ENST00000519955 KRTAP9-9Q9BYP9 154 aa8.08□□□□□ -1.12
NPM1-206ENST00000519955 KRTAP9-4Q9BYQ2 154 aa8.08□□□□□ -1.12
NPM1-206ENST00000519955 A0A1W2PQU0 124 aa8.07□□□□□ -1.12
NPM1-206ENST00000519955 ZNF205O95201 554 aa8.07□□□□□ -1.12
NPM1-206ENST00000519955 KCNH1O95259 989 aa8.07□□□□□ -1.12
NPM1-206ENST00000519955 VAV1P15498 845 aa8.07□□□□□ -1.12
NPM1-206ENST00000519955 ZP2Q05996 745 aa8.07□□□□□ -1.12
NPM1-206ENST00000519955 ZNF574Q6ZN55 896 aaPredicted RBP8.07□□□□□ -1.12
NPM1-206ENST00000519955 SPATA9Q9BWV2 254 aa8.07□□□□□ -1.12
NPM1-206ENST00000519955 FOXP3Q9BZS1 431 aa8.07□□□□□ -1.12
NPM1-206ENST00000519955 CARS2Q9HA77 564 aaKnown RBP8.07□□□□□ -1.12
NPM1-206ENST00000519955 CWC22Q9HCG8 908 aaKnown RBP8.07□□□□□ -1.12
NPM1-206ENST00000519955 PAK6Q9NQU5 681 aaPredicted RBP8.07□□□□□ -1.12
NPM1-206ENST00000519955 PFDN2Q9UHV9 154 aa8.07□□□□□ -1.12
NPM1-206ENST00000519955 KDM2BQ8NHM5 1336 aa8.06□□□□□ -1.12
NPM1-206ENST00000519955 SCO2A0A1W2PP80 73 aa8.06□□□□□ -1.12
NPM1-206ENST00000519955 HYAL3O43820 417 aaPredicted RBP8.06□□□□□ -1.12
NPM1-206ENST00000519955 FUT4P22083 530 aa8.06□□□□□ -1.12
NPM1-206ENST00000519955 TEKQ02763 1124 aa8.06□□□□□ -1.12
NPM1-206ENST00000519955 HSP90AA2PQ14568 343 aaPredicted RBP8.06□□□□□ -1.12
NPM1-206ENST00000519955 NFXL1Q6ZNB6 911 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms