RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 RGS13O14921 159 aa5.23□□□□□ -1.57
PCM1-208ENST00000518877 BUB1BO60566 1050 aaPredicted RBP5.23□□□□□ -1.57
PCM1-208ENST00000518877 DNAJA2O60884 412 aa5.23□□□□□ -1.57
PCM1-208ENST00000518877 GBP2P32456 591 aaPredicted RBP5.23□□□□□ -1.57
PCM1-208ENST00000518877 PSMD2Q13200 908 aa5.23□□□□□ -1.57
PCM1-208ENST00000518877 LAPTM5Q13571 262 aa5.23□□□□□ -1.57
PCM1-208ENST00000518877 KIR3DS1Q14943 382 aa5.23□□□□□ -1.57
PCM1-208ENST00000518877 BBS9Q3SYG4 887 aa5.23□□□□□ -1.57
PCM1-208ENST00000518877 HSF5Q4G112 596 aaPredicted RBP5.23□□□□□ -1.57
PCM1-208ENST00000518877 EAPPQ56P03 285 aaPredicted RBP5.23□□□□□ -1.57
PCM1-208ENST00000518877 SNAP47Q5SQN1 464 aa5.23□□□□□ -1.57
PCM1-208ENST00000518877 IGDCC3Q8IVU1 814 aa5.23□□□□□ -1.57
PCM1-208ENST00000518877 FCRL2Q96LA5 508 aaPredicted RBP5.23□□□□□ -1.57
PCM1-208ENST00000518877 TRAIPQ9BWF2 469 aa5.23□□□□□ -1.57
PCM1-208ENST00000518877 TNFRSF10DQ9UBN6 386 aa5.23□□□□□ -1.57
PCM1-208ENST00000518877 GPR55Q9Y2T6 319 aaPredicted RBP5.23□□□□□ -1.57
PCM1-208ENST00000518877 PRAMEF1O95521 474 aa5.22□□□□□ -1.57
PCM1-208ENST00000518877 PRKCAP17252 672 aa5.22□□□□□ -1.57
PCM1-208ENST00000518877 NCKAP1LP55160 1127 aa5.22□□□□□ -1.57
PCM1-208ENST00000518877 FAM160A1Q05DH4 1040 aa5.22□□□□□ -1.57
PCM1-208ENST00000518877 SNW1Q13573 536 aaKnown RBP5.22□□□□□ -1.57
PCM1-208ENST00000518877 ARSHQ5FYA8 562 aa5.22□□□□□ -1.57
PCM1-208ENST00000518877 FRMD5Q7Z6J6 570 aa5.22□□□□□ -1.57
PCM1-208ENST00000518877 RELL1Q8IUW5 271 aa5.22□□□□□ -1.57
PCM1-208ENST00000518877 NUP43Q8NFH3 380 aa5.22□□□□□ -1.57
PCM1-208ENST00000518877 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.22□□□□□ -1.57
PCM1-208ENST00000518877 PARP2Q9UGN5 583 aa5.22□□□□□ -1.57
PCM1-208ENST00000518877 ANKRD33BA6NCL7 494 aa5.21□□□□□ -1.58
PCM1-208ENST00000518877 FADS2P1A8MWK0 482 aa5.21□□□□□ -1.58
PCM1-208ENST00000518877 MEIS1O00470 390 aa5.21□□□□□ -1.58
PCM1-208ENST00000518877 KCNC1P48547 511 aa5.21□□□□□ -1.58
PCM1-208ENST00000518877 CYP4F8P98187 520 aa5.21□□□□□ -1.58
PCM1-208ENST00000518877 MPP2Q14168 576 aa5.21□□□□□ -1.58
PCM1-208ENST00000518877 RTP5Q14D33 572 aa5.21□□□□□ -1.58
PCM1-208ENST00000518877 NBPF9Q3BBW0 867 aa5.21□□□□□ -1.58
PCM1-208ENST00000518877 CDADC1Q9BWV3 514 aa5.21□□□□□ -1.58
PCM1-208ENST00000518877 PCDHA5Q9Y5H7 936 aa5.21□□□□□ -1.58
PCM1-208ENST00000518877 USP31Q70CQ4 1352 aa5.2□□□□□ -1.58
PCM1-208ENST00000518877 MINDY4BA8MYZ0 360 aa5.2□□□□□ -1.58
PCM1-208ENST00000518877 SIGLEC6O43699 453 aa5.2□□□□□ -1.58
PCM1-208ENST00000518877 UBOX5O94941 541 aa5.2□□□□□ -1.58
PCM1-208ENST00000518877 CTSHP09668 335 aa5.2□□□□□ -1.58
PCM1-208ENST00000518877 INSRRP14616 1297 aa5.2□□□□□ -1.58
PCM1-208ENST00000518877 XPCQ01831 940 aaPredicted RBP5.2□□□□□ -1.58
PCM1-208ENST00000518877 EFEMP1Q12805 493 aa5.2□□□□□ -1.58
PCM1-208ENST00000518877 PUM1Q14671 1186 aaKnown RBP eCLIP5.2□□□□□ -1.581e-11■■■□□ 14.9
PCM1-208ENST00000518877 NBPF12Q5TAG4 269 aaPredicted RBP5.2□□□□□ -1.58
PCM1-208ENST00000518877 REC114Q7Z4M0 266 aa5.2□□□□□ -1.58
PCM1-208ENST00000518877 NLGN1Q8N2Q7 840 aa5.2□□□□□ -1.58
PCM1-208ENST00000518877 GOLM1Q8NBJ4 401 aa5.2□□□□□ -1.58
PCM1-208ENST00000518877 RHOVQ96L33 236 aa5.2□□□□□ -1.58
PCM1-208ENST00000518877 TMEM74Q96NL1 305 aa5.2□□□□□ -1.58
PCM1-208ENST00000518877 A0A1W2PQ27 194 aa5.19□□□□□ -1.58
PCM1-208ENST00000518877 A0A1W2PQ64 194 aa5.19□□□□□ -1.58
PCM1-208ENST00000518877 A0A1W2PQC6 194 aa5.19□□□□□ -1.58
PCM1-208ENST00000518877 A0A1W2PQD8 194 aa5.19□□□□□ -1.58
PCM1-208ENST00000518877 TLR3O15455 904 aaKnown RBP5.19□□□□□ -1.58
PCM1-208ENST00000518877 PFKLP17858 780 aa5.19□□□□□ -1.58
PCM1-208ENST00000518877 ENDOUP21128 410 aaKnown RBP5.19□□□□□ -1.58
PCM1-208ENST00000518877 LIMS1P48059 325 aa5.19□□□□□ -1.58
PCM1-208ENST00000518877 DAB2P98082 770 aa5.19□□□□□ -1.58
PCM1-208ENST00000518877 PWP1Q13610 501 aa5.19□□□□□ -1.58
PCM1-208ENST00000518877 ZC3H14Q6PJT7 736 aaKnown RBP5.19□□□□□ -1.58
PCM1-208ENST00000518877 TP53I13Q8NBR0 393 aaPredicted RBP5.19□□□□□ -1.58
PCM1-208ENST00000518877 FBXO27Q8NI29 283 aa5.19□□□□□ -1.58
PCM1-208ENST00000518877 ZNF512BQ96KM6 892 aaPredicted RBP5.19□□□□□ -1.58
PCM1-208ENST00000518877 GPR20Q99678 358 aa5.19□□□□□ -1.58
PCM1-208ENST00000518877 PRDM14Q9GZV8 571 aa5.19□□□□□ -1.58
PCM1-208ENST00000518877 CHST7Q9NS84 486 aa5.19□□□□□ -1.58
PCM1-208ENST00000518877 USP40Q9NVE5 1235 aa5.19□□□□□ -1.58
PCM1-208ENST00000518877 PALD1Q9ULE6 856 aa5.19□□□□□ -1.58
PCM1-208ENST00000518877 MINPP1Q9UNW1 487 aa5.19□□□□□ -1.58
PCM1-208ENST00000518877 A0A1W2PQ45 241 aaPredicted RBP5.18□□□□□ -1.58
PCM1-208ENST00000518877 A0A1W2PQY0 241 aa5.18□□□□□ -1.58
PCM1-208ENST00000518877 POLR2BP30876 1174 aaKnown RBP5.18□□□□□ -1.58
PCM1-208ENST00000518877 SLURP1P55000 103 aa5.18□□□□□ -1.58
PCM1-208ENST00000518877 RAD51AP2Q09MP3 1159 aa5.18□□□□□ -1.58
PCM1-208ENST00000518877 UBXN11Q5T124 520 aa5.18□□□□□ -1.58
PCM1-208ENST00000518877 RPTNQ6XPR3 784 aa5.18□□□□□ -1.58
PCM1-208ENST00000518877 SLCO6A1Q86UG4 719 aa5.18□□□□□ -1.58
PCM1-208ENST00000518877 AEBP1Q8IUX7 1158 aa5.18□□□□□ -1.58
PCM1-208ENST00000518877 EAF1Q96JC9 268 aaPredicted RBP5.18□□□□□ -1.58
PCM1-208ENST00000518877 TNFRSF12AQ9NP84 129 aa5.18□□□□□ -1.58
PCM1-208ENST00000518877 ERVK13-1Q9NX77 482 aa5.18□□□□□ -1.58
PCM1-208ENST00000518877 IMPACTQ9P2X3 320 aa5.18□□□□□ -1.58
PCM1-208ENST00000518877 FBXL21Q9UKT6 434 aa5.18□□□□□ -1.58
PCM1-208ENST00000518877 PCDHB14Q9Y5E9 798 aa5.18□□□□□ -1.58
PCM1-208ENST00000518877 PATL2C9JE40 543 aaKnown RBP5.17□□□□□ -1.58
PCM1-208ENST00000518877 FFAR3O14843 346 aa5.17□□□□□ -1.58
PCM1-208ENST00000518877 PRICKLE3O43900 615 aaPredicted RBP5.17□□□□□ -1.58
PCM1-208ENST00000518877 CLEC3AO75596 197 aa5.17□□□□□ -1.58
PCM1-208ENST00000518877 ZNF200P98182 395 aaPredicted RBP5.17□□□□□ -1.58
PCM1-208ENST00000518877 CWF19L2Q2TBE0 894 aaKnown RBP5.17□□□□□ -1.58
PCM1-208ENST00000518877 PLEKHN1Q494U1 663 aaPredicted RBP5.17□□□□□ -1.58
PCM1-208ENST00000518877 KRTAP5-3Q6L8H2 238 aa5.17□□□□□ -1.58
PCM1-208ENST00000518877 LSRQ86X29 649 aaPredicted RBP5.17□□□□□ -1.58
PCM1-208ENST00000518877 FAM161BQ96MY7 647 aa5.17□□□□□ -1.58
PCM1-208ENST00000518877 RSRP1Q9BUV0 290 aa5.17□□□□□ -1.58
PCM1-208ENST00000518877 MKRN2Q9H000 416 aaKnown RBP5.17□□□□□ -1.58
PCM1-208ENST00000518877 GFOD1Q9NXC2 390 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms