RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 MAGEC3Q8TD91 643 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 ZNF483Q8TF39 744 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 UBXN4Q92575 508 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 ZNF396Q96N95 335 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 BAG1Q99933 345 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 USP26Q9BXU7 913 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 UBXN6Q9BZV1 441 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 TRIM7Q9C029 511 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 BHLHE41Q9C0J9 482 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 NIF3L1Q9GZT8 377 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 MAF1Q9H063 256 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 SOX17Q9H6I2 414 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 TTC12Q9H892 705 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 LATS2Q9NRM7 1088 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 IFT57Q9NWB7 429 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 PIM2Q9P1W9 311 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 ADAM21Q9UKJ8 722 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 FHOD1Q9Y613 1164 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 CAMSAP2Q08AD1 1489 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 ATXN2Q99700 1313 aaKnown RBP5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 BLMP54132 1417 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 FMN1Q68DA7 1419 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 KIF5CO60282 957 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 ESRRAP11474 423 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 HNRNPH1P31943 449 aaKnown RBP5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 SLC8A1P32418 973 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 KCNA1Q09470 495 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 PSMD2Q13200 908 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 G3BP1Q13283 466 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 ORC1Q13415 861 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 TAF7Q15545 349 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 CCDC158Q5M9N0 1113 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 CCDC183Q5T5S1 534 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 HHATQ5VTY9 493 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 USPL1Q5W0Q7 1092 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 NAIF1Q69YI7 327 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 FBXO38Q6PIJ6 1188 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 SEPT14Q6ZU15 432 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 TAX1BP1Q86VP1 789 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 CEP112Q8N8E3 955 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 GBP7Q8N8V2 638 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 C12orf50Q8NA57 414 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 NEK11Q8NG66 645 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 TDRD7Q8NHU6 1098 aaKnown RBP5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 GPT2Q8TD30 523 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 HDAC7Q8WUI4 952 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 LZICQ8WZA0 190 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 RSRC1Q96IZ7 334 aaKnown RBP5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 OSBPL9Q96SU4 736 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 POLR3CQ9BUI4 534 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 NRSN2Q9GZP1 204 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 ARFGAP3Q9NP61 516 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 MCM8Q9UJA3 840 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 ODF2LQ9ULJ1 636 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 RNF114Q9Y508 228 aa5.5□□□□□ -1.53
HMGB1P19-201ENST00000517578 SOS1Q07889 1333 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 SPATA31E1Q6ZUB1 1445 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 METTL12A8MUP2 240 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 ERC2O15083 957 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 CT47B1P0C2W7 299 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 VDRP11473 427 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 DRD2P14416 443 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 VCAM1P19320 739 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 GPTP24298 496 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 MAPK1P28482 360 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 GCKP35557 465 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 PSMD7P51665 324 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 SH3BGRP55822 239 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 CCT2P78371 535 aaKnown RBP5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 PREPLQ4J6C6 727 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 CDPF1Q6NVV7 123 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 NFXL1Q6ZNB6 911 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 B4GALNT4Q76KP1 1039 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 CCDC80Q76M96 950 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 MFN1Q8IWA4 741 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 FAM114A1Q8IWE2 563 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 FBXL6Q8N531 539 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 SAMD3Q8N6K7 520 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 ASAP3Q8TDY4 903 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 N4BP2L2Q92802 583 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 SMARCE1Q969G3 411 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 TEKT1Q969V4 418 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 FAM129BQ96TA1 746 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 GBP3Q9H0R5 595 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 RMI1Q9H9A7 625 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 CYP4F12Q9HCS2 524 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 SWAP70Q9UH65 585 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 ATP6V1DQ9Y5K8 247 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 GPRASP1Q5JY77 1395 aa5.49□□□□□ -1.53
HMGB1P19-201ENST00000517578 HFM1A2PYH4 1435 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 PTPRGP23470 1445 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 MAP3K5Q99683 1374 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 EFCAB8A8MWE9 144 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 PDLIM1O00151 329 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 EBAG9O00559 213 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 GPR182O15218 404 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 SRGAP3O43295 1099 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 CEP104O60308 925 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 CPNE3O75131 537 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms