RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 PPM1EQ8WY54 764 aa6.33□□□□□ -1.4
CLDND1-212ENST00000506885 TNKS2Q9H2K2 1166 aa6.33□□□□□ -1.4
CLDND1-212ENST00000506885 PRDM10Q9NQV6 1147 aa6.33□□□□□ -1.4
CLDND1-212ENST00000506885 ZIM2Q9NZV7 527 aa6.33□□□□□ -1.4
CLDND1-212ENST00000506885 ANGEL1Q9UNK9 670 aaKnown RBP6.33□□□□□ -1.4
CLDND1-212ENST00000506885 SNCAIPQ9Y6H5 919 aa6.33□□□□□ -1.4
CLDND1-212ENST00000506885 TLR3O15455 904 aaKnown RBP6.32□□□□□ -1.4
CLDND1-212ENST00000506885 DDAH1O94760 285 aa6.32□□□□□ -1.4
CLDND1-212ENST00000506885 PDE6BP35913 854 aa6.32□□□□□ -1.4
CLDND1-212ENST00000506885 POU5F1BQ06416 359 aa6.32□□□□□ -1.4
CLDND1-212ENST00000506885 RING1Q06587 406 aa6.32□□□□□ -1.4
CLDND1-212ENST00000506885 KSR2Q6VAB6 950 aa6.32□□□□□ -1.4
CLDND1-212ENST00000506885 KRBA2Q6ZNG9 492 aa6.32□□□□□ -1.4
CLDND1-212ENST00000506885 RNF180Q86T96 592 aa6.32□□□□□ -1.4
CLDND1-212ENST00000506885 TTC8Q8TAM2 541 aa6.32□□□□□ -1.4
CLDND1-212ENST00000506885 ZNF507Q8TCN5 953 aa6.32□□□□□ -1.4
CLDND1-212ENST00000506885 ISL2Q96A47 359 aa6.32□□□□□ -1.4
CLDND1-212ENST00000506885 ZNF669Q96BR6 464 aaPredicted RBP6.32□□□□□ -1.4
CLDND1-212ENST00000506885 LRRC3Q9BY71 257 aa6.32□□□□□ -1.4
CLDND1-212ENST00000506885 ASPSCR1Q9BZE9 553 aa6.32□□□□□ -1.4
CLDND1-212ENST00000506885 LGR6Q9HBX8 967 aa6.32□□□□□ -1.4
CLDND1-212ENST00000506885 TACC3Q9Y6A5 838 aa6.32□□□□□ -1.4
CLDND1-212ENST00000506885 DYNC1LI2O43237 492 aaPredicted RBP6.31□□□□□ -1.4
CLDND1-212ENST00000506885 AKAP10O43572 662 aa6.31□□□□□ -1.4
CLDND1-212ENST00000506885 NRDCO43847 1150 aa6.31□□□□□ -1.4
CLDND1-212ENST00000506885 FGAP02671 866 aa6.31□□□□□ -1.4
CLDND1-212ENST00000506885 PRNPP04156 253 aa6.31□□□□□ -1.4
CLDND1-212ENST00000506885 NEFMP07197 916 aa6.31□□□□□ -1.4
CLDND1-212ENST00000506885 CD53P19397 219 aa6.31□□□□□ -1.4
CLDND1-212ENST00000506885 TFE3P19532 575 aaPredicted RBP6.31□□□□□ -1.4
CLDND1-212ENST00000506885 BDNFP23560 247 aa6.31□□□□□ -1.4
CLDND1-212ENST00000506885 HOXA10P31260 410 aaPredicted RBP6.31□□□□□ -1.4
CLDND1-212ENST00000506885 MCM4P33991 863 aa6.31□□□□□ -1.4
CLDND1-212ENST00000506885 NEK2P51955 445 aa6.31□□□□□ -1.4
CLDND1-212ENST00000506885 MSMPQ1L6U9 139 aa6.31□□□□□ -1.4
CLDND1-212ENST00000506885 WDR78Q5VTH9 848 aa6.31□□□□□ -1.4
CLDND1-212ENST00000506885 AGMOQ6ZNB7 445 aa6.31□□□□□ -1.4
CLDND1-212ENST00000506885 VSIG10LQ86VR7 867 aa6.31□□□□□ -1.4
CLDND1-212ENST00000506885 GPATCH11Q8N954 259 aa6.31□□□□□ -1.4
CLDND1-212ENST00000506885 SVIPQ8NHG7 77 aa6.31□□□□□ -1.4
CLDND1-212ENST00000506885 FBXL18Q96ME1 805 aa6.31□□□□□ -1.4
CLDND1-212ENST00000506885 MKNK2Q9HBH9 465 aa6.31□□□□□ -1.4
CLDND1-212ENST00000506885 FBXO9Q9UK97 447 aaPredicted RBP6.31□□□□□ -1.4
CLDND1-212ENST00000506885 RPS6KL1Q9Y6S9 549 aa6.31□□□□□ -1.4
CLDND1-212ENST00000506885 DCDC2CA8MYV0 355 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 KATNA1O75449 491 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 FAM87AP0C7U9 286 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 TAL1P17542 331 aaPredicted RBP6.3□□□□□ -1.4
CLDND1-212ENST00000506885 PTMSP20962 102 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 ZNF165P49910 485 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 CASP7P55210 303 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 GP2P55259 537 aaKnown RBP6.3□□□□□ -1.4
CLDND1-212ENST00000506885 LMOD3Q0VAK6 560 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 PABPC4Q13310 644 aaKnown RBP eCLIP6.3□□□□□ -1.44e-9■□□□□ 10.6
CLDND1-212ENST00000506885 CDK5R2Q13319 367 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 PPM1JQ5JR12 505 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 C10orf62Q5T681 223 aaPredicted RBP6.3□□□□□ -1.4
CLDND1-212ENST00000506885 ZBTB37Q5TC79 503 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 SLC4A10Q6U841 1118 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 MPRIPQ6WCQ1 1025 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 ARHGAP27Q6ZUM4 889 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 C12orf40Q86WS4 652 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 LSRQ86X29 649 aaPredicted RBP6.3□□□□□ -1.4
CLDND1-212ENST00000506885 STK11IPQ8N1F8 1099 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 AFAP1L2Q8N4X5 818 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 FBXO27Q8NI29 283 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 MISP3Q96FF7 219 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 MIR1-1HGQ9H1L0 117 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 LRRC4CQ9HCJ2 640 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 SWAP70Q9UH65 585 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 ZNRF3Q9ULT6 936 aa6.3□□□□□ -1.4
CLDND1-212ENST00000506885 OAS3Q9Y6K5 1087 aaKnown RBP6.3□□□□□ -1.4
CLDND1-212ENST00000506885 GSG1L2A8MUP6 293 aa6.29□□□□□ -1.4
CLDND1-212ENST00000506885 B2RBV5 119 aa6.29□□□□□ -1.4
CLDND1-212ENST00000506885 RFPL3O75679 317 aa6.29□□□□□ -1.4
CLDND1-212ENST00000506885 F13A1P00488 732 aa6.29□□□□□ -1.4
CLDND1-212ENST00000506885 FAM153BP0C7A2 387 aa6.29□□□□□ -1.4
CLDND1-212ENST00000506885 IMPDH2P12268 514 aa6.29□□□□□ -1.4
CLDND1-212ENST00000506885 RAPGEF1Q13905 1077 aa6.29□□□□□ -1.4
CLDND1-212ENST00000506885 PPP2R5EQ16537 467 aa6.29□□□□□ -1.4
CLDND1-212ENST00000506885 RASIP1Q5U651 963 aa6.29□□□□□ -1.4
CLDND1-212ENST00000506885 C6orf15Q6UXA7 325 aaPredicted RBP6.29□□□□□ -1.4
CLDND1-212ENST00000506885 CYFIP1Q7L576 1253 aa6.29□□□□□ -1.4
CLDND1-212ENST00000506885 CCDC84Q86UT8 332 aaPredicted RBP6.29□□□□□ -1.4
CLDND1-212ENST00000506885 AMOTL1Q8IY63 956 aa6.29□□□□□ -1.4
CLDND1-212ENST00000506885 FAM9BQ8IZU0 186 aa6.29□□□□□ -1.4
CLDND1-212ENST00000506885 SHISA5Q8N114 240 aa6.29□□□□□ -1.4
CLDND1-212ENST00000506885 RIN3Q8TB24 985 aa6.29□□□□□ -1.4
CLDND1-212ENST00000506885 SLC26A8Q96RN1 970 aa6.29□□□□□ -1.4
CLDND1-212ENST00000506885 DUSP23Q9BVJ7 150 aa6.29□□□□□ -1.4
CLDND1-212ENST00000506885 GTF2IRD1Q9UHL9 959 aa6.29□□□□□ -1.4
CLDND1-212ENST00000506885 INTUQ9ULD6 942 aa6.29□□□□□ -1.4
CLDND1-212ENST00000506885 MAPRE3Q9UPY8 281 aa6.29□□□□□ -1.4
CLDND1-212ENST00000506885 CSADQ9Y600 493 aa6.29□□□□□ -1.4
CLDND1-212ENST00000506885 LRIG2O94898 1065 aa6.28□□□□□ -1.4
CLDND1-212ENST00000506885 JAG1P78504 1218 aa6.28□□□□□ -1.4
CLDND1-212ENST00000506885 PIN1Q13526 163 aaPredicted RBP6.28□□□□□ -1.4
CLDND1-212ENST00000506885 CBX2Q14781 532 aaPredicted RBP6.28□□□□□ -1.4
CLDND1-212ENST00000506885 LONRF2Q1L5Z9 754 aa6.28□□□□□ -1.4
CLDND1-212ENST00000506885 CWF19L2Q2TBE0 894 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms