RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 RASA3Q14644 834 aa6.18□□□□□ -1.42
TOPBP1-204ENST00000505804 BMS1Q14692 1282 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-204ENST00000505804 NFXL1Q6ZNB6 911 aa6.18□□□□□ -1.42
TOPBP1-204ENST00000505804 TMPRSS7Q7RTY8 843 aa6.18□□□□□ -1.42
TOPBP1-204ENST00000505804 VSIG10LQ86VR7 867 aa6.18□□□□□ -1.42
TOPBP1-204ENST00000505804 WFDC3Q8IUB2 231 aa6.18□□□□□ -1.42
TOPBP1-204ENST00000505804 LRRN4CLQ8ND94 238 aa6.18□□□□□ -1.42
TOPBP1-204ENST00000505804 FLCNQ8NFG4 579 aa6.18□□□□□ -1.42
TOPBP1-204ENST00000505804 MKL1Q969V6 931 aa6.18□□□□□ -1.42
TOPBP1-204ENST00000505804 DEPDC7Q96QD5 511 aa6.18□□□□□ -1.42
TOPBP1-204ENST00000505804 SNTG2Q9NY99 539 aa6.18□□□□□ -1.42
TOPBP1-204ENST00000505804 ANGEL1Q9UNK9 670 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-204ENST00000505804 CDK11AQ9UQ88 783 aaPredicted RBP6.18□□□□□ -1.42
TOPBP1-204ENST00000505804 AKT3Q9Y243 479 aa6.18□□□□□ -1.42
TOPBP1-204ENST00000505804 DIS3Q9Y2L1 958 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-204ENST00000505804 H0Y8X5 98 aa6.17□□□□□ -1.42
TOPBP1-204ENST00000505804 WNT11O96014 354 aa6.17□□□□□ -1.42
TOPBP1-204ENST00000505804 NAT2P11245 290 aa6.17□□□□□ -1.42
TOPBP1-204ENST00000505804 LTKP29376 864 aa6.17□□□□□ -1.42
TOPBP1-204ENST00000505804 RASGRF1Q13972 1273 aa6.17□□□□□ -1.42
TOPBP1-204ENST00000505804 LRP8Q14114 963 aa6.17□□□□□ -1.42
TOPBP1-204ENST00000505804 ARHGEF39Q8N4T4 335 aa6.17□□□□□ -1.42
TOPBP1-204ENST00000505804 BVESQ8NE79 360 aa6.17□□□□□ -1.42
TOPBP1-204ENST00000505804 RCC1LQ96I51 464 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-204ENST00000505804 ZDHHC15Q96MV8 337 aa6.17□□□□□ -1.42
TOPBP1-204ENST00000505804 CARS2Q9HA77 564 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-204ENST00000505804 LRP2BPQ9P2M1 347 aa6.17□□□□□ -1.42
TOPBP1-204ENST00000505804 PCDHA11Q9Y5I1 949 aa6.17□□□□□ -1.42
TOPBP1-204ENST00000505804 VAMP4O75379 141 aa6.16□□□□□ -1.42
TOPBP1-204ENST00000505804 GSNP06396 782 aa6.16□□□□□ -1.42
TOPBP1-204ENST00000505804 ITGAVP06756 1048 aa6.16□□□□□ -1.42
TOPBP1-204ENST00000505804 SYPP08247 313 aa6.16□□□□□ -1.42
TOPBP1-204ENST00000505804 ZP2Q05996 745 aa6.16□□□□□ -1.42
TOPBP1-204ENST00000505804 EGR3Q06889 387 aa6.16□□□□□ -1.42
TOPBP1-204ENST00000505804 SLC10A6Q3KNW5 377 aa6.16□□□□□ -1.42
TOPBP1-204ENST00000505804 MTERF2Q49AM1 385 aa6.16□□□□□ -1.42
TOPBP1-204ENST00000505804 ARTNQ5T4W7 220 aa6.16□□□□□ -1.42
TOPBP1-204ENST00000505804 CRTC3Q6UUV7 619 aa6.16□□□□□ -1.42
TOPBP1-204ENST00000505804 SPATC1Q76KD6 591 aa6.16□□□□□ -1.42
TOPBP1-204ENST00000505804 ST13P5Q8NFI4 369 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-204ENST00000505804 FOXP3Q9BZS1 431 aa6.16□□□□□ -1.42
TOPBP1-204ENST00000505804 PIF1Q9H611 641 aa6.16□□□□□ -1.42
TOPBP1-204ENST00000505804 PAK6Q9NQU5 681 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-204ENST00000505804 PRDM7Q9NQW5 492 aa6.16□□□□□ -1.42
TOPBP1-204ENST00000505804 CGGBP1Q9UFW8 167 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-204ENST00000505804 TCFL5Q9UL49 500 aa6.16□□□□□ -1.42
TOPBP1-204ENST00000505804 SF3B6Q9Y3B4 125 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-204ENST00000505804 SSU72P8A0A1W2PR75 194 aa6.15□□□□□ -1.42
TOPBP1-204ENST00000505804 NOP56O00567 594 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-204ENST00000505804 KCNH1O95259 989 aa6.15□□□□□ -1.42
TOPBP1-204ENST00000505804 VAV1P15498 845 aa6.15□□□□□ -1.42
TOPBP1-204ENST00000505804 PCBP3P57721 371 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-204ENST00000505804 NFE2L2Q16236 605 aa6.15□□□□□ -1.42
TOPBP1-204ENST00000505804 ANGEL2Q5VTE6 544 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-204ENST00000505804 CWF19L1Q69YN2 538 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-204ENST00000505804 LRP10Q7Z4F1 713 aa6.15□□□□□ -1.42
TOPBP1-204ENST00000505804 TP53INP2Q8IXH6 220 aa6.15□□□□□ -1.42
TOPBP1-204ENST00000505804 LINC00116Q8NCU8 138 aa6.15□□□□□ -1.42
TOPBP1-204ENST00000505804 DNAJC7Q99615 494 aa6.15□□□□□ -1.42
TOPBP1-204ENST00000505804 EPN3Q9H201 632 aa6.15□□□□□ -1.42
TOPBP1-204ENST00000505804 LMCD1Q9NZU5 365 aa6.15□□□□□ -1.42
TOPBP1-204ENST00000505804 PFDN2Q9UHV9 154 aa6.15□□□□□ -1.42
TOPBP1-204ENST00000505804 EMC9Q9Y3B6 208 aa6.15□□□□□ -1.42
TOPBP1-204ENST00000505804 A0A1W2PQU0 124 aa6.14□□□□□ -1.43
TOPBP1-204ENST00000505804 TBX1O43435 398 aa6.14□□□□□ -1.43
TOPBP1-204ENST00000505804 FKTNO75072 461 aa6.14□□□□□ -1.43
TOPBP1-204ENST00000505804 BMP8BP34820 402 aa6.14□□□□□ -1.43
TOPBP1-204ENST00000505804 POU4F1Q01851 419 aa6.14□□□□□ -1.43
TOPBP1-204ENST00000505804 TEKQ02763 1124 aa6.14□□□□□ -1.43
TOPBP1-204ENST00000505804 IFRD2Q12894 506 aaPredicted RBP6.14□□□□□ -1.43
TOPBP1-204ENST00000505804 DPY19L1Q2PZI1 675 aa6.14□□□□□ -1.43
TOPBP1-204ENST00000505804 ZPBP2Q6X784 338 aa6.14□□□□□ -1.43
TOPBP1-204ENST00000505804 MRFAP1L1Q96HT8 127 aa6.14□□□□□ -1.43
TOPBP1-204ENST00000505804 MRGPRX3Q96LB0 322 aa6.14□□□□□ -1.43
TOPBP1-204ENST00000505804 FCRL3Q96P31 734 aaPredicted RBP6.14□□□□□ -1.43
TOPBP1-204ENST00000505804 SLC12A9Q9BXP2 914 aa6.14□□□□□ -1.43
TOPBP1-204ENST00000505804 ZMYM5Q9UJ78 669 aa6.14□□□□□ -1.43
TOPBP1-204ENST00000505804 AGRPO00253 132 aa6.13□□□□□ -1.43
TOPBP1-204ENST00000505804 DIAPH1O60610 1272 aaKnown RBP6.13□□□□□ -1.43
TOPBP1-204ENST00000505804 CD3EP07766 207 aa6.13□□□□□ -1.43
TOPBP1-204ENST00000505804 RPL10P27635 214 aaKnown RBP6.13□□□□□ -1.43
TOPBP1-204ENST00000505804 NOP2P46087 812 aaKnown RBP6.13□□□□□ -1.43
TOPBP1-204ENST00000505804 AMPD2Q01433 879 aa6.13□□□□□ -1.43
TOPBP1-204ENST00000505804 POMZP3Q6PJE2 187 aa6.13□□□□□ -1.43
TOPBP1-204ENST00000505804 RNF111Q6ZNA4 994 aa6.13□□□□□ -1.43
TOPBP1-204ENST00000505804 ZNF227Q86WZ6 799 aa6.13□□□□□ -1.43
TOPBP1-204ENST00000505804 TRIM59Q8IWR1 403 aa6.13□□□□□ -1.43
TOPBP1-204ENST00000505804 PI4K2BQ8TCG2 481 aa6.13□□□□□ -1.43
TOPBP1-204ENST00000505804 MCMBPQ9BTE3 642 aa6.13□□□□□ -1.43
TOPBP1-204ENST00000505804 ADAMTS10Q9H324 1103 aa6.13□□□□□ -1.43
TOPBP1-204ENST00000505804 ZFP64Q9NPA5 681 aa6.13□□□□□ -1.43
TOPBP1-204ENST00000505804 DNAJC25-GNG10A0A024R161 153 aa6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 IQCA1LA6NCM1 817 aa6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 ZNF205O95201 554 aa6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 GSTM1P09488 218 aa6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 IFNGR1P15260 489 aa6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 FUT4P22083 530 aa6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 GRIA2P42262 883 aa6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 SSRP1Q08945 709 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-204ENST00000505804 PLCL1Q15111 1095 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms