RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 C2orf69Q8N8R5 385 aa6.07□□□□□ -1.44
CDH9-203ENST00000505045 KRTAP4-11Q9BYQ6 195 aa6.07□□□□□ -1.44
CDH9-203ENST00000505045 GDF2Q9UK05 429 aaPredicted RBP6.07□□□□□ -1.44
CDH9-203ENST00000505045 MAFBQ9Y5Q3 323 aaPredicted RBP6.07□□□□□ -1.44
CDH9-203ENST00000505045 MYH2Q9UKX2 1941 aa6.07□□□□□ -1.44
CDH9-203ENST00000505045 PALM3A6NDB9 673 aaPredicted RBP6.06□□□□□ -1.44
CDH9-203ENST00000505045 EYA2O00167 538 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 EFSO43281 561 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 CT47B1P0C2W7 299 aaPredicted RBP6.06□□□□□ -1.44
CDH9-203ENST00000505045 UBTFL1P0CB47 393 aaPredicted RBP6.06□□□□□ -1.44
CDH9-203ENST00000505045 MAPTP10636 758 aaKnown RBP6.06□□□□□ -1.44
CDH9-203ENST00000505045 HIBADHP31937 336 aaKnown RBP6.06□□□□□ -1.44
CDH9-203ENST00000505045 CACNB3P54284 484 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 HNRNPUQ00839 825 aaKnown RBP eCLIP6.06□□□□□ -1.44
CDH9-203ENST00000505045 CHAF1AQ13111 956 aaPredicted RBP6.06□□□□□ -1.44
CDH9-203ENST00000505045 SH3PXD2AQ5TCZ1 1133 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 SLCO4C1Q6ZQN7 724 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 FBXO33Q7Z6M2 555 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 DEFB129Q9H1M3 183 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 TFIP11Q9UBB9 837 aaKnown RBP6.06□□□□□ -1.44
CDH9-203ENST00000505045 TTF2Q9UNY4 1162 aaKnown RBP6.06□□□□□ -1.44
CDH9-203ENST00000505045 KIF16BQ96L93 1317 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 ZSWIM8A7E2V4 1837 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 DOCK2Q92608 1830 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 ARAFP10398 606 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 BMP4P12644 408 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 ADORA1P30542 326 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 FKBP1AP62942 108 aaKnown RBP6.06□□□□□ -1.44
CDH9-203ENST00000505045 PUM3Q15397 648 aaKnown RBP6.06□□□□□ -1.44
CDH9-203ENST00000505045 DLGAP5Q15398 846 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 TBCELQ5QJ74 424 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 INTS3Q68E01 1043 aaKnown RBP6.06□□□□□ -1.44
CDH9-203ENST00000505045 APOBEC3FQ8IUX4 373 aaKnown RBP6.06□□□□□ -1.44
CDH9-203ENST00000505045 GOLGA6L1Q8N7Z2 621 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 NEDD1Q8NHV4 660 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 CLMNQ96JQ2 1002 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 CSRNP1Q96S65 589 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 KRTAP4-5Q9BYR2 181 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 TDRD3Q9H7E2 651 aaKnown RBP6.06□□□□□ -1.44
CDH9-203ENST00000505045 VEZTQ9HBM0 779 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 KLF15Q9UIH9 416 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 HDAC9Q9UKV0 1011 aa6.06□□□□□ -1.44
CDH9-203ENST00000505045 CDK5RAP2Q96SN8 1893 aa6.05□□□□□ -1.44
CDH9-203ENST00000505045 RLBP1P12271 317 aa6.05□□□□□ -1.44
CDH9-203ENST00000505045 ARSJQ5FYB0 599 aaPredicted RBP6.05□□□□□ -1.44
CDH9-203ENST00000505045 NBPF12Q5TAG4 269 aaPredicted RBP6.05□□□□□ -1.44
CDH9-203ENST00000505045 EDARADDQ8WWZ3 215 aa6.05□□□□□ -1.44
CDH9-203ENST00000505045 FRAT1Q92837 279 aaPredicted RBP6.05□□□□□ -1.44
CDH9-203ENST00000505045 TEPSINQ96N21 525 aa6.05□□□□□ -1.44
CDH9-203ENST00000505045 API5Q9BZZ5 524 aaKnown RBP6.05□□□□□ -1.44
CDH9-203ENST00000505045 GPC6Q9Y625 555 aaPredicted RBP6.05□□□□□ -1.44
CDH9-203ENST00000505045 MAST2Q6P0Q8 1798 aa6.05□□□□□ -1.44
CDH9-203ENST00000505045 AK9Q5TCS8 1911 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 PNMA6EA0A0J9YXQ4 647 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 TRPA1O75762 1119 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 PRDX5P30044 214 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 PHKA1P46020 1223 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 CRKP46108 304 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 RBM5P52756 815 aaKnown RBP eCLIP6.04□□□□□ -1.44
CDH9-203ENST00000505045 FKBP1BP68106 108 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 RASA3Q14644 834 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 ARTNQ5T4W7 220 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 ATF7IPQ6VMQ6 1270 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 DZIP1LQ8IYY4 767 aaKnown RBP6.04□□□□□ -1.44
CDH9-203ENST00000505045 TMEM57Q8N5G2 664 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 ABHD8Q96I13 439 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 PPP1R12CQ9BZL4 782 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 TMEM39BQ9GZU3 492 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 TSPAN10Q9H1Z9 355 aaPredicted RBP6.04□□□□□ -1.44
CDH9-203ENST00000505045 R3HDMLQ9H3Y0 253 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 C1orf115Q9H7X2 142 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 RNF186Q9NXI6 227 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 ZNF70Q9UC06 446 aaPredicted RBP6.04□□□□□ -1.44
CDH9-203ENST00000505045 ANGEL1Q9UNK9 670 aaKnown RBP6.04□□□□□ -1.44
CDH9-203ENST00000505045 PTPRFP10586 1907 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 SIPA1L1O43166 1804 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 SERTM1A2A2V5 107 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 DCDC2BA2VCK2 349 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 SFI1A8K8P3 1242 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 TCP10L2B9ZVM9 353 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 SRGAP3O43295 1099 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 CIAO1O76071 339 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 PSMA6P60900 246 aaKnown RBP6.04□□□□□ -1.44
CDH9-203ENST00000505045 SNRPNP63162 240 aaKnown RBP6.04□□□□□ -1.44
CDH9-203ENST00000505045 ATP2B3Q16720 1220 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 LDLRAD1Q5T700 205 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 C1orf53Q5VUE5 145 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 PI16Q6UXB8 463 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 VPS37DQ86XT2 251 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 ARHGAP45Q92619 1136 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 COPRSQ9NQ92 184 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 AVENQ9NQS1 362 aaPredicted RBP6.04□□□□□ -1.44
CDH9-203ENST00000505045 SERPINA10Q9UK55 444 aa6.04□□□□□ -1.44
CDH9-203ENST00000505045 RFX7Q2KHR2 1363 aa6.03□□□□□ -1.44
CDH9-203ENST00000505045 ZBED9Q6R2W3 1325 aa6.03□□□□□ -1.44
CDH9-203ENST00000505045 CA12O43570 354 aa6.03□□□□□ -1.44
CDH9-203ENST00000505045 IFIT1P09914 478 aaKnown RBP6.03□□□□□ -1.44
CDH9-203ENST00000505045 EPXP11678 715 aa6.03□□□□□ -1.44
CDH9-203ENST00000505045 SLC5A1P13866 664 aa6.03□□□□□ -1.44
CDH9-203ENST00000505045 MTX1Q13505 466 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms