RNA–Protein interactions for RNA: ENST00000498479.5

RC3H2-210, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 2

Gene RC3H2, Length 5,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-210ENST00000498479 THAP9Q9H5L6 903 aa13.17□□□□□ -0.3
RC3H2-210ENST00000498479 IKBKGQ9Y6K9 419 aa13.17□□□□□ -0.3
RC3H2-210ENST00000498479 ABHD10Q9NUJ1 306 aa13.17□□□□□ -0.3
RC3H2-210ENST00000498479 ODF2LQ9ULJ1 636 aa13.17□□□□□ -0.3
RC3H2-210ENST00000498479 CEP83Q9Y592 693 aa13.17□□□□□ -0.3
RC3H2-210ENST00000498479 ADGRB2O60241 1585 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 WHAMMQ8TF30 809 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 HNRNPLLQ8WVV9 542 aaKnown RBP13.16□□□□□ -0.3
RC3H2-210ENST00000498479 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.16□□□□□ -0.3
RC3H2-210ENST00000498479 TNKSO95271 1327 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 TARSL2A2RTX5 802 aaKnown RBP13.16□□□□□ -0.3
RC3H2-210ENST00000498479 B4DLN1 442 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 RGS16O15492 202 aaPredicted RBP13.16□□□□□ -0.3
RC3H2-210ENST00000498479 DDAH1O94760 285 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 A1BGP04217 495 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 USP14P54578 494 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 GLE1Q53GS7 698 aaKnown RBP13.16□□□□□ -0.3
RC3H2-210ENST00000498479 SMYD4Q8IYR2 804 aaPredicted RBP13.16□□□□□ -0.3
RC3H2-210ENST00000498479 NRXN1Q9ULB1 1477 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 HECW2Q9P2P5 1572 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 STK36Q9NRP7 1315 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 hCG_1642624A0A1W2PR95 340 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 KCNK3O14649 394 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 HEXIM1O94992 359 aaKnown RBP13.16□□□□□ -0.3
RC3H2-210ENST00000498479 ZBTB16Q05516 673 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 TCP11X2Q5H9J9 407 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 DCAF17Q5H9S7 520 aaPredicted RBP13.16□□□□□ -0.3
RC3H2-210ENST00000498479 CMTR1Q8N1G2 835 aaKnown RBP13.16□□□□□ -0.3
RC3H2-210ENST00000498479 CNOT6LQ96LI5 555 aaKnown RBP13.16□□□□□ -0.3
RC3H2-210ENST00000498479 TRIM31Q9BZY9 425 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 NLRC4Q9NPP4 1024 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 TMEM110-MUSTN1A8MSY1 372 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 JPH2Q9BR39 696 aaPredicted RBP13.16□□□□□ -0.3
RC3H2-210ENST00000498479 SALL3Q9BXA9 1300 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 HMGB1P1B2RPK0 211 aaPredicted RBP13.16□□□□□ -0.3
RC3H2-210ENST00000498479 CHUKO15111 745 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 PRDM1O75626 825 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 TNFAIP3P21580 790 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 GALNT17Q6IS24 598 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 ENGASEQ8NFI3 743 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 HDAC9Q9UKV0 1011 aa13.16□□□□□ -0.3
RC3H2-210ENST00000498479 BUB1O43683 1085 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 SCG2P13521 617 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 IL2RBP14784 551 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 TXKP42681 527 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 EXOSC10Q01780 885 aaKnown RBP13.15□□□□□ -0.3
RC3H2-210ENST00000498479 USP37Q86T82 979 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 NHEJ1Q9H9Q4 299 aaPredicted RBP13.15□□□□□ -0.3
RC3H2-210ENST00000498479 HOMER3Q9NSC5 361 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 TUBE1Q9UJT0 475 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 KRIT1O00522 736 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 CALUO43852 315 aaPredicted RBP13.15□□□□□ -0.3
RC3H2-210ENST00000498479 NR1D1P20393 614 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 ARID4AP29374 1257 aaPredicted RBP13.15□□□□□ -0.3
RC3H2-210ENST00000498479 GGCXP38435 758 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 DPF2Q92785 391 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 AIFM3Q96NN9 605 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 EPB41L5Q9HCM4 733 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 EXOC5O00471 708 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 PCP11498 1178 aaKnown RBP13.15□□□□□ -0.3
RC3H2-210ENST00000498479 ADD2P35612 726 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 PHKG2P15735 406 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 GCKP35557 465 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 LRCH2Q5VUJ6 765 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 COG1Q8WTW3 980 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 AMFRQ9UKV5 643 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 PCDHB6Q9Y5E3 794 aa13.15□□□□□ -0.3
RC3H2-210ENST00000498479 MB21D1Q8N884 522 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 CCDC197Q8NCU1 140 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 LSM14BQ9BX40 385 aaKnown RBP13.14□□□□□ -0.31
RC3H2-210ENST00000498479 ATP6V0A2Q9Y487 856 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 VIRMAQ69YN4 1812 aaKnown RBP13.14□□□□□ -0.31
RC3H2-210ENST00000498479 USP32Q8NFA0 1604 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 TMEM132AQ24JP5 1023 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 VSIG1Q86XK7 387 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 SNX29Q8TEQ0 813 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 RUBCNQ92622 972 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 KRT12Q99456 494 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 GPHNQ9NQX3 736 aaPredicted RBP13.14□□□□□ -0.31
RC3H2-210ENST00000498479 CCDC169A6NNP5 214 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 ZPR1O75312 459 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 PCCAP05165 728 aaPredicted RBP13.14□□□□□ -0.31
RC3H2-210ENST00000498479 P2RX5Q93086 422 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 VCXQ9H320 206 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 LAD1O00515 517 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 TRIM66O15016 1216 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 FAM13AO94988 1023 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 VSNL1P62760 191 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 TRAF1Q13077 416 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 CCDC174Q6PII3 467 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 SHC4Q6S5L8 630 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 CCDC63Q8NA47 563 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 ANKRD65E5RJM6 399 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 LUC7L3O95232 432 aaKnown RBP13.14□□□□□ -0.31
RC3H2-210ENST00000498479 TBC1D8O95759 1140 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 NR5A1Q13285 461 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 DYMQ7RTS9 669 aa13.14□□□□□ -0.31
RC3H2-210ENST00000498479 RAB3IPQ96QF0 476 aaPredicted RBP13.14□□□□□ -0.31
RC3H2-210ENST00000498479 TACO1Q9BSH4 297 aaKnown RBP13.14□□□□□ -0.31
RC3H2-210ENST00000498479 IQCGQ9H095 443 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms