RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 PIK3R6Q5UE93 754 aa7.49□□□□□ -1.21
BRCA1-224ENST00000497488 XRRA1Q6P2D8 792 aa7.49□□□□□ -1.21
BRCA1-224ENST00000497488 LRFN4Q6PJG9 635 aa7.49□□□□□ -1.21
BRCA1-224ENST00000497488 MMS22LQ6ZRQ5 1243 aa7.49□□□□□ -1.21
BRCA1-224ENST00000497488 VN1R5Q7Z5H4 357 aa7.49□□□□□ -1.21
BRCA1-224ENST00000497488 KIF18BQ86Y91 864 aa7.49□□□□□ -1.21
BRCA1-224ENST00000497488 ZNF513Q8N8E2 541 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-224ENST00000497488 PPP1R14AQ96A00 147 aa7.49□□□□□ -1.21
BRCA1-224ENST00000497488 TNIP3Q96KP6 325 aa7.49□□□□□ -1.21
BRCA1-224ENST00000497488 MAGEB10Q96LZ2 347 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-224ENST00000497488 LRGUKQ96M69 825 aa7.49□□□□□ -1.21
BRCA1-224ENST00000497488 HAUS7Q99871 368 aa7.49□□□□□ -1.21
BRCA1-224ENST00000497488 LGR4Q9BXB1 951 aa7.49□□□□□ -1.21
BRCA1-224ENST00000497488 GPAMQ9HCL2 828 aa7.49□□□□□ -1.21
BRCA1-224ENST00000497488 KLHL3Q9UH77 587 aa7.49□□□□□ -1.21
BRCA1-224ENST00000497488 LOC102724428A0A0B4J2F2 783 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 RNASEH2AO75792 299 aaKnown RBP7.48□□□□□ -1.21
BRCA1-224ENST00000497488 SETSIPP0DME0 302 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 RAG1P15918 1043 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 RHOQP17081 205 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 ADCYAP1R1P41586 468 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 ECE1P42892 770 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 SIK1P57059 783 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 ADCY1Q08828 1119 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 KLF1Q13351 362 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-224ENST00000497488 BIRC3Q13489 604 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 LAPTM4AQ15012 233 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 HEATR6Q6AI08 1181 aaKnown RBP7.48□□□□□ -1.21
BRCA1-224ENST00000497488 SRLQ86TD4 932 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 DRC7Q8IY82 874 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 FAM186BQ8IYM0 893 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 CMTR2Q8IYT2 770 aaKnown RBP7.48□□□□□ -1.21
BRCA1-224ENST00000497488 PPHLN1Q8NEY8 458 aaKnown RBP7.48□□□□□ -1.21
BRCA1-224ENST00000497488 PTPRN2Q92932 1015 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 KIFC2Q96AC6 838 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 WNK4Q96J92 1243 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 MPP4Q96JB8 637 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 DHRS1Q96LJ7 313 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 NUP88Q99567 741 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-224ENST00000497488 AAASQ9NRG9 546 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 FAM86C1Q9NVL1 165 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 SOX13Q9UN79 622 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 DGKBQ9Y6T7 804 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 CC2D2AQ9P2K1 1620 aa7.48□□□□□ -1.21
BRCA1-224ENST00000497488 ZNF891A8MT65 544 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-224ENST00000497488 CHURC1-FNTBB4DL54 471 aa7.47□□□□□ -1.21
BRCA1-224ENST00000497488 TBX1O43435 398 aa7.47□□□□□ -1.21
BRCA1-224ENST00000497488 COPB2P35606 906 aa7.47□□□□□ -1.21
BRCA1-224ENST00000497488 AK2P54819 239 aa7.47□□□□□ -1.21
BRCA1-224ENST00000497488 IL2P60568 153 aa7.47□□□□□ -1.21
BRCA1-224ENST00000497488 RBM10P98175 930 aaKnown RBP7.47□□□□□ -1.21
BRCA1-224ENST00000497488 PDE4BQ07343 736 aa7.47□□□□□ -1.21
BRCA1-224ENST00000497488 FAPQ12884 760 aa7.47□□□□□ -1.21
BRCA1-224ENST00000497488 AP3B2Q13367 1082 aa7.47□□□□□ -1.21
BRCA1-224ENST00000497488 SART3Q15020 963 aaKnown RBP7.47□□□□□ -1.21
BRCA1-224ENST00000497488 ICE2Q659A1 982 aa7.47□□□□□ -1.21
BRCA1-224ENST00000497488 ZCCHC8Q6NZY4 707 aaKnown RBP7.47□□□□□ -1.21
BRCA1-224ENST00000497488 HDXQ7Z353 690 aa7.47□□□□□ -1.21
BRCA1-224ENST00000497488 NKAPQ8N5F7 415 aaKnown RBP7.47□□□□□ -1.21
BRCA1-224ENST00000497488 GPBAR1Q8TDU6 330 aa7.47□□□□□ -1.21
BRCA1-224ENST00000497488 HSPBAP1Q96EW2 488 aa7.47□□□□□ -1.21
BRCA1-224ENST00000497488 GPR101Q96P66 508 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-224ENST00000497488 KLHL25Q9H0H3 589 aa7.47□□□□□ -1.21
BRCA1-224ENST00000497488 VTA1Q9NP79 307 aa7.47□□□□□ -1.21
BRCA1-224ENST00000497488 C1orf112Q9NSG2 853 aa7.47□□□□□ -1.21
BRCA1-224ENST00000497488 TOR4AQ9NXH8 423 aa7.47□□□□□ -1.21
BRCA1-224ENST00000497488 PTPN22Q9Y2R2 807 aa7.47□□□□□ -1.21
BRCA1-224ENST00000497488 J3QW42 95 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 EPB41L2O43491 1005 aaKnown RBP7.46□□□□□ -1.22
BRCA1-224ENST00000497488 DLX3O60479 287 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 FKBP9O95302 570 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 TP53P04637 393 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-224ENST00000497488 ESRRAP11474 423 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-224ENST00000497488 VCAM1P19320 739 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 RENBPP51606 427 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 KRT85P78386 507 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 GPLD1P80108 840 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 MYBPC2Q14324 1141 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 PUM3Q15397 648 aaKnown RBP7.46□□□□□ -1.22
BRCA1-224ENST00000497488 TDRD10Q5VZ19 366 aaKnown RBP7.46□□□□□ -1.22
BRCA1-224ENST00000497488 Q6ZNB5 142 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 FKBP9P1Q75LS8 142 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 CHST15Q7LFX5 561 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-224ENST00000497488 PNMA8AQ86V59 439 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-224ENST00000497488 TMEM192Q8IY95 271 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 CCDC89Q8N998 374 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 SMC1BQ8NDV3 1235 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 C1orf162Q8NEQ5 155 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-224ENST00000497488 ENOX1Q8TC92 643 aaKnown RBP7.46□□□□□ -1.22
BRCA1-224ENST00000497488 DDX54Q8TDD1 881 aaKnown RBP7.46□□□□□ -1.22
BRCA1-224ENST00000497488 SKA1Q96BD8 255 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 ACSBG1Q96GR2 724 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 FAXDC2Q96IV6 333 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 SLC6A18Q96N87 628 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 MYD88Q99836 296 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 NAA15Q9BXJ9 866 aaKnown RBP7.46□□□□□ -1.22
BRCA1-224ENST00000497488 SLC12A5Q9H2X9 1139 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 PGAP2Q9UHJ9 254 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 ADAM30Q9UKF2 790 aa7.46□□□□□ -1.22
BRCA1-224ENST00000497488 DYTNA2CJ06 578 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms