RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 LMNB2Q03252 620 aa6.25□□□□□ -1.41
CLK1-214ENST00000496205 SNW1Q13573 536 aaKnown RBP6.25□□□□□ -1.41
CLK1-214ENST00000496205 SP8Q8IXZ3 490 aa6.25□□□□□ -1.41
CLK1-214ENST00000496205 ZNF655Q8N720 491 aaPredicted RBP6.25□□□□□ -1.41
CLK1-214ENST00000496205 LINC01356Q8N9X3 169 aa6.25□□□□□ -1.41
CLK1-214ENST00000496205 LINC00116Q8NCU8 138 aa6.25□□□□□ -1.41
CLK1-214ENST00000496205 TEPSINQ96N21 525 aa6.25□□□□□ -1.41
CLK1-214ENST00000496205 ASCC2Q9H1I8 757 aaPredicted RBP6.25□□□□□ -1.41
CLK1-214ENST00000496205 UBOX5O94941 541 aa6.24□□□□□ -1.41
CLK1-214ENST00000496205 RECKO95980 971 aa6.24□□□□□ -1.41
CLK1-214ENST00000496205 SYPP08247 313 aa6.24□□□□□ -1.41
CLK1-214ENST00000496205 GBP1P32455 592 aa6.24□□□□□ -1.41
CLK1-214ENST00000496205 NCKAP1LP55160 1127 aa6.24□□□□□ -1.41
CLK1-214ENST00000496205 PCBP3P57721 371 aaKnown RBP6.24□□□□□ -1.41
CLK1-214ENST00000496205 EFEMP1Q12805 493 aa6.24□□□□□ -1.41
CLK1-214ENST00000496205 TAF1CQ15572 869 aaPredicted RBP6.24□□□□□ -1.41
CLK1-214ENST00000496205 EAPPQ56P03 285 aaPredicted RBP6.24□□□□□ -1.41
CLK1-214ENST00000496205 FAM161BQ96MY7 647 aa6.24□□□□□ -1.41
CLK1-214ENST00000496205 PWWP2AQ96N64 755 aa6.24□□□□□ -1.41
CLK1-214ENST00000496205 TMPRSS5Q9H3S3 457 aa6.24□□□□□ -1.41
CLK1-214ENST00000496205 MINPP1Q9UNW1 487 aa6.24□□□□□ -1.41
CLK1-214ENST00000496205 PCDHA5Q9Y5H7 936 aa6.24□□□□□ -1.41
CLK1-214ENST00000496205 FADS2P1A8MWK0 482 aa6.23□□□□□ -1.41
CLK1-214ENST00000496205 ABLIM1O14639 778 aa6.23□□□□□ -1.41
CLK1-214ENST00000496205 RGS13O14921 159 aa6.23□□□□□ -1.41
CLK1-214ENST00000496205 CTSHP09668 335 aa6.23□□□□□ -1.41
CLK1-214ENST00000496205 CEBPAP49715 358 aaPredicted RBP6.23□□□□□ -1.41
CLK1-214ENST00000496205 NBPF9Q3BBW0 867 aa6.23□□□□□ -1.41
CLK1-214ENST00000496205 HSF5Q4G112 596 aaPredicted RBP6.23□□□□□ -1.41
CLK1-214ENST00000496205 LDLRAD1Q5T700 205 aa6.23□□□□□ -1.41
CLK1-214ENST00000496205 TMC6Q7Z403 805 aa6.23□□□□□ -1.41
CLK1-214ENST00000496205 SSU72P8A0A1W2PR75 194 aa6.22□□□□□ -1.41
CLK1-214ENST00000496205 ZC3H12DA2A288 527 aaKnown RBP6.22□□□□□ -1.41
CLK1-214ENST00000496205 PRICKLE3O43900 615 aaPredicted RBP6.22□□□□□ -1.41
CLK1-214ENST00000496205 MPOP05164 745 aa6.22□□□□□ -1.41
CLK1-214ENST00000496205 ST13P50502 369 aaKnown RBP6.22□□□□□ -1.41
CLK1-214ENST00000496205 PLP2Q04941 152 aa6.22□□□□□ -1.41
CLK1-214ENST00000496205 ZXDCQ2QGD7 858 aaPredicted RBP6.22□□□□□ -1.41
CLK1-214ENST00000496205 ERICH6BQ5W0A0 696 aa6.22□□□□□ -1.41
CLK1-214ENST00000496205 FRMD5Q7Z6J6 570 aa6.22□□□□□ -1.41
CLK1-214ENST00000496205 FBXO27Q8NI29 283 aa6.22□□□□□ -1.41
CLK1-214ENST00000496205 RHOVQ96L33 236 aa6.22□□□□□ -1.41
CLK1-214ENST00000496205 USP31Q70CQ4 1352 aa6.21□□□□□ -1.41
CLK1-214ENST00000496205 FFAR3O14843 346 aa6.21□□□□□ -1.42
CLK1-214ENST00000496205 BUB1BO60566 1050 aaPredicted RBP6.21□□□□□ -1.42
CLK1-214ENST00000496205 PRAMEF1O95521 474 aa6.21□□□□□ -1.42
CLK1-214ENST00000496205 MRPL58Q14197 206 aaKnown RBP6.21□□□□□ -1.42
CLK1-214ENST00000496205 RTP5Q14D33 572 aa6.21□□□□□ -1.42
CLK1-214ENST00000496205 RAB3GAP1Q15042 981 aa6.21□□□□□ -1.42
CLK1-214ENST00000496205 ZNF326Q5BKZ1 582 aaKnown RBP6.21□□□□□ -1.42
CLK1-214ENST00000496205 NBPF12Q5TAG4 269 aaPredicted RBP6.21□□□□□ -1.42
CLK1-214ENST00000496205 OLFML2BQ68BL8 750 aa6.21□□□□□ -1.42
CLK1-214ENST00000496205 BDH2Q9BUT1 245 aa6.21□□□□□ -1.42
CLK1-214ENST00000496205 TNFRSF10DQ9UBN6 386 aa6.21□□□□□ -1.42
CLK1-214ENST00000496205 PARP2Q9UGN5 583 aa6.21□□□□□ -1.42
CLK1-214ENST00000496205 GPR55Q9Y2T6 319 aaPredicted RBP6.21□□□□□ -1.42
CLK1-214ENST00000496205 NUDT19A8MXV4 375 aa6.2□□□□□ -1.42
CLK1-214ENST00000496205 INSRRP14616 1297 aa6.2□□□□□ -1.42
CLK1-214ENST00000496205 SPATS1Q496A3 300 aa6.2□□□□□ -1.42
CLK1-214ENST00000496205 ARSHQ5FYA8 562 aa6.2□□□□□ -1.42
CLK1-214ENST00000496205 DIEXFQ68CQ4 756 aaKnown RBP6.2□□□□□ -1.42
CLK1-214ENST00000496205 GALNT18Q6P9A2 607 aa6.2□□□□□ -1.42
CLK1-214ENST00000496205 FCRL2Q96LA5 508 aaPredicted RBP6.2□□□□□ -1.42
CLK1-214ENST00000496205 PRDM14Q9GZV8 571 aa6.2□□□□□ -1.42
CLK1-214ENST00000496205 PRKCAP17252 672 aa6.19□□□□□ -1.42
CLK1-214ENST00000496205 POLR2BP30876 1174 aaKnown RBP6.19□□□□□ -1.42
CLK1-214ENST00000496205 CHMP4BP1P59074 171 aa6.19□□□□□ -1.42
CLK1-214ENST00000496205 RNF4P78317 190 aa6.19□□□□□ -1.42
CLK1-214ENST00000496205 FAM160A1Q05DH4 1040 aa6.19□□□□□ -1.42
CLK1-214ENST00000496205 REC114Q7Z4M0 266 aa6.19□□□□□ -1.42
CLK1-214ENST00000496205 SLCO6A1Q86UG4 719 aa6.19□□□□□ -1.42
CLK1-214ENST00000496205 BORCS6Q96GS4 357 aa6.19□□□□□ -1.42
CLK1-214ENST00000496205 TAF6LQ9Y6J9 622 aa6.19□□□□□ -1.42
CLK1-214ENST00000496205 WTIPA6NIX2 430 aaPredicted RBP6.18□□□□□ -1.42
CLK1-214ENST00000496205 GARTP22102 1010 aa6.18□□□□□ -1.42
CLK1-214ENST00000496205 VAMP1P23763 118 aa6.18□□□□□ -1.42
CLK1-214ENST00000496205 IGFBP6P24592 240 aaPredicted RBP6.18□□□□□ -1.42
CLK1-214ENST00000496205 GBP2P32456 591 aaPredicted RBP6.18□□□□□ -1.42
CLK1-214ENST00000496205 LIMS1P48059 325 aa6.18□□□□□ -1.42
CLK1-214ENST00000496205 SLURP1P55000 103 aa6.18□□□□□ -1.42
CLK1-214ENST00000496205 DAB2P98082 770 aa6.18□□□□□ -1.42
CLK1-214ENST00000496205 LAPTM5Q13571 262 aa6.18□□□□□ -1.42
CLK1-214ENST00000496205 CBX2Q14781 532 aaPredicted RBP6.18□□□□□ -1.42
CLK1-214ENST00000496205 RPTNQ6XPR3 784 aa6.18□□□□□ -1.42
CLK1-214ENST00000496205 GOLM1Q8NBJ4 401 aa6.18□□□□□ -1.42
CLK1-214ENST00000496205 TMEM74Q96NL1 305 aa6.18□□□□□ -1.42
CLK1-214ENST00000496205 TNFRSF12AQ9NP84 129 aa6.18□□□□□ -1.42
CLK1-214ENST00000496205 ERVK13-1Q9NX77 482 aa6.18□□□□□ -1.42
CLK1-214ENST00000496205 ACSL6Q9UKU0 697 aa6.18□□□□□ -1.42
CLK1-214ENST00000496205 IRS2Q9Y4H2 1338 aa6.18□□□□□ -1.42
CLK1-214ENST00000496205 SIGLEC6O43699 453 aa6.17□□□□□ -1.42
CLK1-214ENST00000496205 RAG1P15918 1043 aa6.17□□□□□ -1.42
CLK1-214ENST00000496205 ARL4AP40617 200 aa6.17□□□□□ -1.42
CLK1-214ENST00000496205 CYP4F8P98187 520 aa6.17□□□□□ -1.42
CLK1-214ENST00000496205 MPP2Q14168 576 aa6.17□□□□□ -1.42
CLK1-214ENST00000496205 PUM1Q14671 1186 aaKnown RBP eCLIP6.17□□□□□ -1.42
CLK1-214ENST00000496205 HHIPL2Q6UWX4 724 aa6.17□□□□□ -1.42
CLK1-214ENST00000496205 ADGRG2Q8IZP9 1017 aa6.17□□□□□ -1.42
CLK1-214ENST00000496205 TMEM52Q8NDY8 209 aa6.17□□□□□ -1.42
CLK1-214ENST00000496205 NUP43Q8NFH3 380 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms