RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 CCT2P78371 535 aaKnown RBP12.69□□□□□ -0.38
TFF3-203ENST00000489676 USP17L24Q0WX57 530 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 POTEEQ6S8J3 1075 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 CATSPERGQ6ZRH7 1159 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 FAM43AQ8N2R8 423 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 SRBD1Q8N5C6 995 aaKnown RBP12.69□□□□□ -0.38
TFF3-203ENST00000489676 MTMR8Q96EF0 704 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 SPZ1Q9BXG8 430 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 CPVLQ9H3G5 476 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 RIOX1Q9H6W3 641 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 GPCPD1Q9NPB8 672 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 PPP1R9AQ9ULJ8 1098 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 NAP1L2Q9ULW6 460 aaPredicted RBP12.69□□□□□ -0.38
TFF3-203ENST00000489676 CCDC196A0A1B0GTZ2 297 aa12.68□□□□□ -0.38
TFF3-203ENST00000489676 SPDYE16A6NNV3 312 aaPredicted RBP12.68□□□□□ -0.38
TFF3-203ENST00000489676 TMEM232C9JQI7 657 aa12.68□□□□□ -0.38
TFF3-203ENST00000489676 AOC2O75106 756 aa12.68□□□□□ -0.38
TFF3-203ENST00000489676 IFNAR1P17181 557 aa12.68□□□□□ -0.38
TFF3-203ENST00000489676 SMARCA1P28370 1054 aa12.68□□□□□ -0.38
TFF3-203ENST00000489676 SLC16A2P36021 539 aa12.68□□□□□ -0.38
TFF3-203ENST00000489676 TM4SF4P48230 202 aa12.68□□□□□ -0.38
TFF3-203ENST00000489676 VEGFBP49765 207 aa12.68□□□□□ -0.38
TFF3-203ENST00000489676 GNAQP50148 359 aa12.68□□□□□ -0.38
TFF3-203ENST00000489676 KIF23Q02241 960 aaPredicted RBP12.68□□□□□ -0.38
TFF3-203ENST00000489676 SYDE2Q5VT97 1194 aa12.68□□□□□ -0.38
TFF3-203ENST00000489676 LBX2Q6XYB7 198 aa12.68□□□□□ -0.38
TFF3-203ENST00000489676 PAXIP1Q6ZW49 1069 aaPredicted RBP12.68□□□□□ -0.38
TFF3-203ENST00000489676 FAM160B2Q86V87 743 aa12.68□□□□□ -0.38
TFF3-203ENST00000489676 CCDC83Q8IWF9 413 aa12.68□□□□□ -0.38
TFF3-203ENST00000489676 HSCBQ8IWL3 235 aa12.68□□□□□ -0.38
TFF3-203ENST00000489676 SLF1Q9BQI6 1058 aa12.68□□□□□ -0.38
TFF3-203ENST00000489676 LZTS2Q9BRK4 669 aa12.68□□□□□ -0.38
TFF3-203ENST00000489676 TANGO6Q9C0B7 1094 aa12.68□□□□□ -0.38
TFF3-203ENST00000489676 ASCC2Q9H1I8 757 aaPredicted RBP12.68□□□□□ -0.38
TFF3-203ENST00000489676 ZCCHC17Q9NP64 241 aaKnown RBP12.68□□□□□ -0.38
TFF3-203ENST00000489676 FEM1BQ9UK73 627 aa12.68□□□□□ -0.38
TFF3-203ENST00000489676 ADAMTS5Q9UNA0 930 aa12.68□□□□□ -0.38
TFF3-203ENST00000489676 RBM19Q9Y4C8 960 aaKnown RBP12.68□□□□□ -0.38
TFF3-203ENST00000489676 MYH6P13533 1939 aa12.68□□□□□ -0.38
TFF3-203ENST00000489676 ADGRA2Q96PE1 1338 aa12.67□□□□□ -0.38
TFF3-203ENST00000489676 WDR33Q9C0J8 1336 aaKnown RBP12.67□□□□□ -0.38
TFF3-203ENST00000489676 FLOT1O75955 427 aa12.67□□□□□ -0.38
TFF3-203ENST00000489676 DSG3P32926 999 aa12.67□□□□□ -0.38
TFF3-203ENST00000489676 INHBEP58166 350 aa12.67□□□□□ -0.38
TFF3-203ENST00000489676 SREBF2Q12772 1141 aa12.67□□□□□ -0.38
TFF3-203ENST00000489676 IFNL1Q8IU54 200 aa12.67□□□□□ -0.38
TFF3-203ENST00000489676 ADGRF4Q8IZF3 695 aa12.67□□□□□ -0.38
TFF3-203ENST00000489676 CMTR1Q8N1G2 835 aaKnown RBP12.67□□□□□ -0.38
TFF3-203ENST00000489676 NSUN7Q8NE18 718 aaKnown RBP12.67□□□□□ -0.38
TFF3-203ENST00000489676 REPS2Q8NFH8 660 aa12.67□□□□□ -0.38
TFF3-203ENST00000489676 SMARCC2Q8TAQ2 1214 aa12.67□□□□□ -0.38
TFF3-203ENST00000489676 UBA5Q9GZZ9 404 aa12.67□□□□□ -0.38
TFF3-203ENST00000489676 JMJD4Q9H9V9 463 aa12.67□□□□□ -0.38
TFF3-203ENST00000489676 PRR12Q9ULL5 1215 aa12.67□□□□□ -0.38
TFF3-203ENST00000489676 STK36Q9NRP7 1315 aa12.66□□□□□ -0.38
TFF3-203ENST00000489676 PDHXO00330 501 aa12.66□□□□□ -0.38
TFF3-203ENST00000489676 GRM1Q13255 1194 aa12.66□□□□□ -0.38
TFF3-203ENST00000489676 PABPC4Q13310 644 aaKnown RBP eCLIP12.66□□□□□ -0.38
TFF3-203ENST00000489676 PRPF38AQ8NAV1 312 aaKnown RBP12.66□□□□□ -0.38
TFF3-203ENST00000489676 CHURC1Q8WUH1 139 aa12.66□□□□□ -0.38
TFF3-203ENST00000489676 ATG4CQ96DT6 458 aa12.66□□□□□ -0.38
TFF3-203ENST00000489676 RNF26Q9BY78 433 aaPredicted RBP12.66□□□□□ -0.38
TFF3-203ENST00000489676 RANBP17Q9H2T7 1088 aaKnown RBP12.66□□□□□ -0.38
TFF3-203ENST00000489676 ZNF536O15090 1300 aa12.65□□□□□ -0.38
TFF3-203ENST00000489676 PTPDC1A2A3K4 754 aa12.65□□□□□ -0.38
TFF3-203ENST00000489676 VWA5AO00534 786 aa12.65□□□□□ -0.38
TFF3-203ENST00000489676 DHX16O60231 1041 aaKnown RBP12.65□□□□□ -0.38
TFF3-203ENST00000489676 JAK2O60674 1132 aa12.65□□□□□ -0.38
TFF3-203ENST00000489676 PPP1R11O60927 126 aaPredicted RBP12.65□□□□□ -0.38
TFF3-203ENST00000489676 DTNBO60941 627 aa12.65□□□□□ -0.38
TFF3-203ENST00000489676 FMNL1O95466 1100 aaPredicted RBP12.65□□□□□ -0.38
TFF3-203ENST00000489676 MAP2K2P36507 400 aa12.65□□□□□ -0.38
TFF3-203ENST00000489676 HERVK_113P62684 666 aa12.65□□□□□ -0.38
TFF3-203ENST00000489676 IRX3P78415 501 aaPredicted RBP12.65□□□□□ -0.38
TFF3-203ENST00000489676 COG2Q14746 738 aa12.65□□□□□ -0.38
TFF3-203ENST00000489676 PKN1Q16512 942 aa12.65□□□□□ -0.38
TFF3-203ENST00000489676 PHKBQ93100 1093 aa12.65□□□□□ -0.38
TFF3-203ENST00000489676 KIFC2Q96AC6 838 aa12.65□□□□□ -0.38
TFF3-203ENST00000489676 P2RX7Q99572 595 aaKnown RBP12.65□□□□□ -0.38
TFF3-203ENST00000489676 LLPHQ9BRT6 129 aaKnown RBP12.65□□□□□ -0.38
TFF3-203ENST00000489676 SLC38A10Q9HBR0 1119 aa12.65□□□□□ -0.38
TFF3-203ENST00000489676 ISY1Q9ULR0 285 aaKnown RBP12.65□□□□□ -0.38
TFF3-203ENST00000489676 RBBP6Q7Z6E9 1792 aaKnown RBP12.65□□□□□ -0.38
TFF3-203ENST00000489676 SMCHD1A6NHR9 2005 aa12.64□□□□□ -0.39
TFF3-203ENST00000489676 CPLX1O14810 134 aa12.64□□□□□ -0.39
TFF3-203ENST00000489676 ATP2A1O14983 1001 aa12.64□□□□□ -0.39
TFF3-203ENST00000489676 ZBTB5O15062 677 aa12.64□□□□□ -0.39
TFF3-203ENST00000489676 PRPF3O43395 683 aaKnown RBP12.64□□□□□ -0.39
TFF3-203ENST00000489676 CNMDO75829 334 aa12.64□□□□□ -0.39
TFF3-203ENST00000489676 CDKL5O76039 1030 aa12.64□□□□□ -0.39
TFF3-203ENST00000489676 FDX1P10109 184 aa12.64□□□□□ -0.39
TFF3-203ENST00000489676 CYP2C8P10632 490 aa12.64□□□□□ -0.39
TFF3-203ENST00000489676 FDPSP14324 419 aaKnown RBP12.64□□□□□ -0.39
TFF3-203ENST00000489676 OSBPP22059 807 aa12.64□□□□□ -0.39
TFF3-203ENST00000489676 ANP32AP39687 249 aaKnown RBP12.64□□□□□ -0.39
TFF3-203ENST00000489676 IKQ13123 557 aaPredicted RBP12.64□□□□□ -0.39
TFF3-203ENST00000489676 CDC37Q16543 378 aaPredicted RBP12.64□□□□□ -0.39
TFF3-203ENST00000489676 CPLX2Q6PUV4 134 aaKnown RBP12.64□□□□□ -0.39
TFF3-203ENST00000489676 REM2Q8IYK8 340 aaPredicted RBP12.64□□□□□ -0.39
TFF3-203ENST00000489676 CCDC82Q8N4S0 544 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms