RNA–Protein interactions for RNA: ENST00000488254.6

NOLC1-207, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NOLC1, Length 2,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-207ENST00000488254 CCDC196A0A1B0GTZ2 297 aa11.76□□□□□ -0.53
NOLC1-207ENST00000488254 VPS37CA5D8V6 355 aaPredicted RBP11.76□□□□□ -0.53
NOLC1-207ENST00000488254 NT5C2P49902 561 aa11.76□□□□□ -0.53
NOLC1-207ENST00000488254 LARP1BQ659C4 914 aaKnown RBP11.76□□□□□ -0.53
NOLC1-207ENST00000488254 TANGO6Q9C0B7 1094 aa11.76□□□□□ -0.53
NOLC1-207ENST00000488254 KIAA1683Q9H0B3 1180 aa11.76□□□□□ -0.53
NOLC1-207ENST00000488254 RBM28Q9NW13 759 aaKnown RBP11.76□□□□□ -0.53
NOLC1-207ENST00000488254 VPS54Q9P1Q0 977 aa11.76□□□□□ -0.53
NOLC1-207ENST00000488254 KCNJ14Q9UNX9 436 aa11.76□□□□□ -0.53
NOLC1-207ENST00000488254 ZDHHC9Q9Y397 364 aa11.76□□□□□ -0.53
NOLC1-207ENST00000488254 TRPM7Q96QT4 1865 aa11.76□□□□□ -0.53
NOLC1-207ENST00000488254 FMNL1O95466 1100 aaPredicted RBP11.75□□□□□ -0.53
NOLC1-207ENST00000488254 HTRA3P83110 453 aa11.75□□□□□ -0.53
NOLC1-207ENST00000488254 TYW1BQ6NUM6 668 aa11.75□□□□□ -0.53
NOLC1-207ENST00000488254 GADL1Q6ZQY3 521 aa11.75□□□□□ -0.53
NOLC1-207ENST00000488254 ERO1BQ86YB8 467 aa11.75□□□□□ -0.53
NOLC1-207ENST00000488254 WDR18Q9BV38 432 aa11.75□□□□□ -0.53
NOLC1-207ENST00000488254 RPAP3Q9H6T3 665 aaPredicted RBP11.75□□□□□ -0.53
NOLC1-207ENST00000488254 JMJD4Q9H9V9 463 aa11.75□□□□□ -0.53
NOLC1-207ENST00000488254 DDX49Q9Y6V7 483 aaKnown RBP11.75□□□□□ -0.53
NOLC1-207ENST00000488254 NID2Q14112 1375 aa11.75□□□□□ -0.53
NOLC1-207ENST00000488254 HTTP42858 3142 aa11.75□□□□□ -0.53
NOLC1-207ENST00000488254 PASKQ96RG2 1323 aa11.75□□□□□ -0.53
NOLC1-207ENST00000488254 SPDYE5A6NIY4 337 aa11.75□□□□□ -0.53
NOLC1-207ENST00000488254 TOMM70O94826 608 aa11.75□□□□□ -0.53
NOLC1-207ENST00000488254 FAM173BQ6P4H8 233 aa11.75□□□□□ -0.53
NOLC1-207ENST00000488254 CPLX2Q6PUV4 134 aaKnown RBP11.75□□□□□ -0.53
NOLC1-207ENST00000488254 GMCL1Q96IK5 515 aa11.75□□□□□ -0.53
NOLC1-207ENST00000488254 LLPHQ9BRT6 129 aaKnown RBP11.75□□□□□ -0.53
NOLC1-207ENST00000488254 ALG1Q9BT22 464 aa11.75□□□□□ -0.53
NOLC1-207ENST00000488254 AS3MTQ9HBK9 375 aa11.75□□□□□ -0.53
NOLC1-207ENST00000488254 GOLGA6L22H0YM25 854 aa11.74□□□□□ -0.53
NOLC1-207ENST00000488254 PPP1R11O60927 126 aaPredicted RBP11.74□□□□□ -0.53
NOLC1-207ENST00000488254 RCAN1P53805 252 aa11.74□□□□□ -0.53
NOLC1-207ENST00000488254 ASPRV1Q53RT3 343 aa11.74□□□□□ -0.53
NOLC1-207ENST00000488254 SMC1BQ8NDV3 1235 aa11.74□□□□□ -0.53
NOLC1-207ENST00000488254 DCAF4Q8WV16 495 aa11.74□□□□□ -0.53
NOLC1-207ENST00000488254 COA7Q96BR5 231 aa11.74□□□□□ -0.53
NOLC1-207ENST00000488254 LMBRD1Q9NUN5 540 aa11.74□□□□□ -0.53
NOLC1-207ENST00000488254 FLOT1O75955 427 aa11.74□□□□□ -0.53
NOLC1-207ENST00000488254 HEATR3Q7Z4Q2 680 aa11.74□□□□□ -0.53
NOLC1-207ENST00000488254 SAPCD2Q86UD0 394 aa11.74□□□□□ -0.53
NOLC1-207ENST00000488254 TRIM22Q8IYM9 498 aa11.74□□□□□ -0.53
NOLC1-207ENST00000488254 TRIM44Q96DX7 344 aaPredicted RBP11.74□□□□□ -0.53
NOLC1-207ENST00000488254 PRR12Q9ULL5 1215 aa11.74□□□□□ -0.53
NOLC1-207ENST00000488254 ABT1Q9ULW3 272 aaKnown RBP11.74□□□□□ -0.53
NOLC1-207ENST00000488254 CDKL5O76039 1030 aa11.73□□□□□ -0.53
NOLC1-207ENST00000488254 NASPP49321 788 aaPredicted RBP11.73□□□□□ -0.53
NOLC1-207ENST00000488254 STAT2P52630 851 aa11.73□□□□□ -0.53
NOLC1-207ENST00000488254 ZNF445P59923 1031 aa11.73□□□□□ -0.53
NOLC1-207ENST00000488254 AKAP17AQ02040 695 aaKnown RBP11.73□□□□□ -0.53
NOLC1-207ENST00000488254 PPATQ06203 517 aa11.73□□□□□ -0.53
NOLC1-207ENST00000488254 CCDC173Q0VFZ6 552 aa11.73□□□□□ -0.53
NOLC1-207ENST00000488254 USH1GQ495M9 461 aa11.73□□□□□ -0.53
NOLC1-207ENST00000488254 GPATCH4Q5T3I0 446 aaKnown RBP11.73□□□□□ -0.53
NOLC1-207ENST00000488254 CCDC174Q6PII3 467 aa11.73□□□□□ -0.53
NOLC1-207ENST00000488254 MAP3K14Q99558 947 aa11.73□□□□□ -0.53
NOLC1-207ENST00000488254 SH2D4AQ9H788 454 aa11.73□□□□□ -0.53
NOLC1-207ENST00000488254 PRPF3O43395 683 aaKnown RBP11.72□□□□□ -0.53
NOLC1-207ENST00000488254 STX6O43752 255 aa11.72□□□□□ -0.53
NOLC1-207ENST00000488254 ZNF157P51786 506 aaPredicted RBP11.72□□□□□ -0.53
NOLC1-207ENST00000488254 NUCB2P80303 420 aa11.72□□□□□ -0.53
NOLC1-207ENST00000488254 PPP4R3BQ5MIZ7 849 aa11.72□□□□□ -0.53
NOLC1-207ENST00000488254 SYDE2Q5VT97 1194 aa11.72□□□□□ -0.53
NOLC1-207ENST00000488254 WWC2Q6AWC2 1192 aa11.72□□□□□ -0.53
NOLC1-207ENST00000488254 MCTP1Q6DN14 999 aa11.72□□□□□ -0.53
NOLC1-207ENST00000488254 C8orf76Q96K31 380 aa11.72□□□□□ -0.53
NOLC1-207ENST00000488254 ZIC5Q96T25 663 aa11.72□□□□□ -0.53
NOLC1-207ENST00000488254 RNF26Q9BY78 433 aaPredicted RBP11.72□□□□□ -0.53
NOLC1-207ENST00000488254 RIOX1Q9H6W3 641 aa11.72□□□□□ -0.53
NOLC1-207ENST00000488254 MTMR6Q9Y217 621 aa11.72□□□□□ -0.53
NOLC1-207ENST00000488254 H3BQV1 296 aa11.72□□□□□ -0.53
NOLC1-207ENST00000488254 DEXIO95424 95 aa11.72□□□□□ -0.53
NOLC1-207ENST00000488254 HMGN5P82970 282 aaKnown RBP11.72□□□□□ -0.53
NOLC1-207ENST00000488254 NOM1Q5C9Z4 860 aaKnown RBP11.72□□□□□ -0.53
NOLC1-207ENST00000488254 IFFO2Q5TF58 517 aa11.72□□□□□ -0.53
NOLC1-207ENST00000488254 CPXCR1Q8N123 301 aa11.72□□□□□ -0.53
NOLC1-207ENST00000488254 SPZ1Q9BXG8 430 aa11.72□□□□□ -0.53
NOLC1-207ENST00000488254 GINM1Q9NU53 330 aa11.72□□□□□ -0.53
NOLC1-207ENST00000488254 SCG2P13521 617 aa11.71□□□□□ -0.53
NOLC1-207ENST00000488254 GNAQP50148 359 aa11.71□□□□□ -0.53
NOLC1-207ENST00000488254 PPIL2Q13356 520 aa11.71□□□□□ -0.53
NOLC1-207ENST00000488254 MOGSQ13724 837 aa11.71□□□□□ -0.53
NOLC1-207ENST00000488254 PPP2R5BQ15173 497 aa11.71□□□□□ -0.53
NOLC1-207ENST00000488254 CDC37Q16543 378 aaPredicted RBP11.71□□□□□ -0.53
NOLC1-207ENST00000488254 QRICH1Q2TAL8 776 aa11.71□□□□□ -0.53
NOLC1-207ENST00000488254 POTEEQ6S8J3 1075 aa11.71□□□□□ -0.53
NOLC1-207ENST00000488254 PAXIP1Q6ZW49 1069 aaPredicted RBP11.71□□□□□ -0.53
NOLC1-207ENST00000488254 OXER1Q8TDS5 423 aa11.71□□□□□ -0.53
NOLC1-207ENST00000488254 ATG4CQ96DT6 458 aa11.71□□□□□ -0.53
NOLC1-207ENST00000488254 RRP36Q96EU6 259 aaKnown RBP11.71□□□□□ -0.53
NOLC1-207ENST00000488254 CWC22Q9HCG8 908 aaKnown RBP11.71□□□□□ -0.53
NOLC1-207ENST00000488254 TMOD4Q9NZQ9 345 aa11.71□□□□□ -0.53
NOLC1-207ENST00000488254 A0A0G2JLL6 359 aaPredicted RBP11.71□□□□□ -0.54
NOLC1-207ENST00000488254 WDR46O15213 610 aaKnown RBP11.71□□□□□ -0.54
NOLC1-207ENST00000488254 ECM2O94769 699 aaPredicted RBP11.71□□□□□ -0.54
NOLC1-207ENST00000488254 USP14P54578 494 aa11.71□□□□□ -0.54
NOLC1-207ENST00000488254 PFKFB3Q16875 520 aaPredicted RBP11.71□□□□□ -0.54
NOLC1-207ENST00000488254 ZSCAN23Q3MJ62 389 aa11.71□□□□□ -0.54
NOLC1-207ENST00000488254 KRT40Q6A162 431 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms