RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 CD163Q86VB7 1156 aa8.11□□□□□ -1.11
SEC22C-215ENST00000487701 ARHGAP45Q92619 1136 aa8.11□□□□□ -1.11
SEC22C-215ENST00000487701 API5Q9BZZ5 524 aaKnown RBP8.11□□□□□ -1.11
SEC22C-215ENST00000487701 USP44Q9H0E7 712 aa8.11□□□□□ -1.11
SEC22C-215ENST00000487701 SMG9Q9H0W8 520 aaKnown RBP8.11□□□□□ -1.11
SEC22C-215ENST00000487701 NMRK2Q9NPI5 230 aa8.11□□□□□ -1.11
SEC22C-215ENST00000487701 C9orf78Q9NZ63 289 aaPredicted RBP8.11□□□□□ -1.11
SEC22C-215ENST00000487701 FRRS1LQ9P0K9 344 aa8.11□□□□□ -1.11
SEC22C-215ENST00000487701 USTQ9Y2C2 406 aa8.11□□□□□ -1.11
SEC22C-215ENST00000487701 ADAMTSL1Q8N6G6 1762 aa8.11□□□□□ -1.11
SEC22C-215ENST00000487701 J3QW42 95 aa8.1□□□□□ -1.11
SEC22C-215ENST00000487701 GHRHP01286 108 aa8.1□□□□□ -1.11
SEC22C-215ENST00000487701 RAC1P63000 192 aa8.1□□□□□ -1.11
SEC22C-215ENST00000487701 AOC3Q16853 763 aa8.1□□□□□ -1.11
SEC22C-215ENST00000487701 NOM1Q5C9Z4 860 aaKnown RBP8.1□□□□□ -1.11
SEC22C-215ENST00000487701 LMBR1LQ6UX01 489 aa8.1□□□□□ -1.11
SEC22C-215ENST00000487701 DPP8Q6V1X1 898 aaPredicted RBP8.1□□□□□ -1.11
SEC22C-215ENST00000487701 ATF7IPQ6VMQ6 1270 aa8.1□□□□□ -1.11
SEC22C-215ENST00000487701 ANKRD18AQ8IVF6 992 aa8.1□□□□□ -1.11
SEC22C-215ENST00000487701 ANKRD44Q8N8A2 993 aa8.1□□□□□ -1.11
SEC22C-215ENST00000487701 GPR101Q96P66 508 aaPredicted RBP8.1□□□□□ -1.11
SEC22C-215ENST00000487701 CDC5LQ99459 802 aaKnown RBP8.1□□□□□ -1.11
SEC22C-215ENST00000487701 RBSNQ9H1K0 784 aa8.1□□□□□ -1.11
SEC22C-215ENST00000487701 POLLQ9UGP5 575 aa8.1□□□□□ -1.11
SEC22C-215ENST00000487701 GLTPD2A6NH11 291 aa8.09□□□□□ -1.11
SEC22C-215ENST00000487701 WTIPA6NIX2 430 aaPredicted RBP8.09□□□□□ -1.11
SEC22C-215ENST00000487701 FZD9O00144 591 aa8.09□□□□□ -1.11
SEC22C-215ENST00000487701 PPIP5K2O43314 1243 aa8.09□□□□□ -1.11
SEC22C-215ENST00000487701 ABL1P00519 1130 aa8.09□□□□□ -1.11
SEC22C-215ENST00000487701 FURINP09958 794 aa8.09□□□□□ -1.11
SEC22C-215ENST00000487701 SOX18P35713 384 aa8.09□□□□□ -1.11
SEC22C-215ENST00000487701 CCT4P50991 539 aaKnown RBP8.09□□□□□ -1.11
SEC22C-215ENST00000487701 DNM1Q05193 864 aaKnown RBP8.09□□□□□ -1.11
SEC22C-215ENST00000487701 KIAA2012Q0VF49 1180 aa8.09□□□□□ -1.11
SEC22C-215ENST00000487701 AAMPQ13685 434 aa8.09□□□□□ -1.11
SEC22C-215ENST00000487701 RABL6Q3YEC7 729 aaPredicted RBP8.09□□□□□ -1.11
SEC22C-215ENST00000487701 TTC39BQ5VTQ0 682 aaPredicted RBP8.09□□□□□ -1.11
SEC22C-215ENST00000487701 INTS3Q68E01 1043 aaKnown RBP8.09□□□□□ -1.11
SEC22C-215ENST00000487701 B4GALNT3Q6L9W6 998 aa8.09□□□□□ -1.11
SEC22C-215ENST00000487701 DMRTC2Q8IXT2 367 aaPredicted RBP8.09□□□□□ -1.11
SEC22C-215ENST00000487701 TTC16Q8NEE8 873 aa8.09□□□□□ -1.11
SEC22C-215ENST00000487701 TBC1D16Q8TBP0 767 aa8.09□□□□□ -1.11
SEC22C-215ENST00000487701 EDEM1Q92611 657 aa8.09□□□□□ -1.11
SEC22C-215ENST00000487701 FRAT1Q92837 279 aaPredicted RBP8.09□□□□□ -1.11
SEC22C-215ENST00000487701 BICC1Q9H694 974 aaKnown RBP8.09□□□□□ -1.11
SEC22C-215ENST00000487701 BSDC1Q9NW68 430 aaPredicted RBP8.09□□□□□ -1.11
SEC22C-215ENST00000487701 PODXL2Q9NZ53 605 aa8.09□□□□□ -1.11
SEC22C-215ENST00000487701 ARAP2Q8WZ64 1704 aa8.09□□□□□ -1.11
SEC22C-215ENST00000487701 XDHP47989 1333 aa8.08□□□□□ -1.12
SEC22C-215ENST00000487701 KDM2BQ8NHM5 1336 aa8.08□□□□□ -1.12
SEC22C-215ENST00000487701 A0A0A0MRY4 1105 aa8.08□□□□□ -1.12
SEC22C-215ENST00000487701 ANKRD18BA2A2Z9 1011 aa8.08□□□□□ -1.12
SEC22C-215ENST00000487701 DDNO94850 711 aaPredicted RBP8.08□□□□□ -1.12
SEC22C-215ENST00000487701 RLBP1P12271 317 aa8.08□□□□□ -1.12
SEC22C-215ENST00000487701 PCSK2P16519 638 aa8.08□□□□□ -1.12
SEC22C-215ENST00000487701 EIF1AXP47813 144 aaKnown RBP8.08□□□□□ -1.12
SEC22C-215ENST00000487701 IFIT5Q13325 482 aaKnown RBP8.08□□□□□ -1.12
SEC22C-215ENST00000487701 SUPT20HQ8NEM7 779 aa8.08□□□□□ -1.12
SEC22C-215ENST00000487701 PLD4Q96BZ4 506 aa8.08□□□□□ -1.12
SEC22C-215ENST00000487701 MEIS3Q99687 375 aa8.08□□□□□ -1.12
SEC22C-215ENST00000487701 TMX4Q9H1E5 349 aaPredicted RBP8.08□□□□□ -1.12
SEC22C-215ENST00000487701 MINPP1Q9UNW1 487 aa8.08□□□□□ -1.12
SEC22C-215ENST00000487701 YDJCA8MPS7 323 aa8.07□□□□□ -1.12
SEC22C-215ENST00000487701 IPO8O15397 1037 aaKnown RBP8.07□□□□□ -1.12
SEC22C-215ENST00000487701 UFL1O94874 794 aa8.07□□□□□ -1.12
SEC22C-215ENST00000487701 KLRK1P26718 216 aa8.07□□□□□ -1.12
SEC22C-215ENST00000487701 IGHMBP2P38935 993 aaKnown RBP8.07□□□□□ -1.12
SEC22C-215ENST00000487701 ZNF211Q13398 564 aaPredicted RBP8.07□□□□□ -1.12
SEC22C-215ENST00000487701 GRIK4Q16099 956 aa8.07□□□□□ -1.12
SEC22C-215ENST00000487701 C8orf34Q49A92 452 aa8.07□□□□□ -1.12
SEC22C-215ENST00000487701 XP32Q5T750 250 aa8.07□□□□□ -1.12
SEC22C-215ENST00000487701 ZKSCAN2Q63HK3 967 aa8.07□□□□□ -1.12
SEC22C-215ENST00000487701 ZNF438Q7Z4V0 828 aa8.07□□□□□ -1.12
SEC22C-215ENST00000487701 WFDC8Q8IUA0 241 aa8.07□□□□□ -1.12
SEC22C-215ENST00000487701 NIM1KQ8IY84 436 aa8.07□□□□□ -1.12
SEC22C-215ENST00000487701 TMEM57Q8N5G2 664 aa8.07□□□□□ -1.12
SEC22C-215ENST00000487701 JDP2Q8WYK2 163 aa8.07□□□□□ -1.12
SEC22C-215ENST00000487701 YTHDC1Q96MU7 727 aaKnown RBP8.07□□□□□ -1.12
SEC22C-215ENST00000487701 NACC1Q96RE7 527 aa8.07□□□□□ -1.12
SEC22C-215ENST00000487701 MPHOSPH8Q99549 860 aa8.07□□□□□ -1.12
SEC22C-215ENST00000487701 VPS33BQ9H267 617 aa8.07□□□□□ -1.12
SEC22C-215ENST00000487701 ABI2Q9NYB9 513 aaPredicted RBP8.07□□□□□ -1.12
SEC22C-215ENST00000487701 TRPM7Q96QT4 1865 aa8.06□□□□□ -1.12
SEC22C-215ENST00000487701 ECM29Q5VYK3 1845 aa8.06□□□□□ -1.12
SEC22C-215ENST00000487701 UBTFL1P0CB47 393 aaPredicted RBP8.06□□□□□ -1.12
SEC22C-215ENST00000487701 RFX5P48382 616 aaPredicted RBP8.06□□□□□ -1.12
SEC22C-215ENST00000487701 CHRNDQ07001 517 aa8.06□□□□□ -1.12
SEC22C-215ENST00000487701 CCDC57Q2TAC2 916 aa8.06□□□□□ -1.12
SEC22C-215ENST00000487701 GDF6Q6KF10 455 aaPredicted RBP8.06□□□□□ -1.12
SEC22C-215ENST00000487701 ALKBH2Q6NS38 261 aa8.06□□□□□ -1.12
SEC22C-215ENST00000487701 PHLDB3Q6NSJ2 640 aa8.06□□□□□ -1.12
SEC22C-215ENST00000487701 OR13H1Q8NG92 308 aa8.06□□□□□ -1.12
SEC22C-215ENST00000487701 KLHDC4Q8TBB5 520 aa8.06□□□□□ -1.12
SEC22C-215ENST00000487701 PUS3Q9BZE2 481 aaKnown RBP8.06□□□□□ -1.12
SEC22C-215ENST00000487701 DBNDD1Q9H9R9 158 aa8.06□□□□□ -1.12
SEC22C-215ENST00000487701 ANO2Q9NQ90 1003 aa8.06□□□□□ -1.12
SEC22C-215ENST00000487701 LRRFIP2Q9Y608 721 aaKnown RBP8.06□□□□□ -1.12
SEC22C-215ENST00000487701 MED23Q9ULK4 1368 aa8.06□□□□□ -1.12
SEC22C-215ENST00000487701 IRS2Q9Y4H2 1338 aa8.05□□□□□ -1.12
SEC22C-215ENST00000487701 CEP350Q5VT06 3117 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms