RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 CEP128Q6ZU80 1094 aa6.73□□□□□ -1.33
UBR3-211ENST00000487689 DACT3Q96B18 629 aaPredicted RBP6.73□□□□□ -1.33
UBR3-211ENST00000487689 SIGLEC10Q96LC7 697 aa6.73□□□□□ -1.33
UBR3-211ENST00000487689 FOXP3Q9BZS1 431 aa6.73□□□□□ -1.33
UBR3-211ENST00000487689 MKRN2Q9H000 416 aaKnown RBP6.73□□□□□ -1.33
UBR3-211ENST00000487689 COPRSQ9NQ92 184 aa6.73□□□□□ -1.33
UBR3-211ENST00000487689 FBXL21Q9UKT6 434 aa6.73□□□□□ -1.33
UBR3-211ENST00000487689 IRAK3Q9Y616 596 aa6.73□□□□□ -1.33
UBR3-211ENST00000487689 FKTNO75072 461 aa6.72□□□□□ -1.33
UBR3-211ENST00000487689 SYPP08247 313 aa6.72□□□□□ -1.33
UBR3-211ENST00000487689 GARTP22102 1010 aa6.72□□□□□ -1.33
UBR3-211ENST00000487689 ARL4AP40617 200 aa6.72□□□□□ -1.33
UBR3-211ENST00000487689 GALK1P51570 392 aa6.72□□□□□ -1.33
UBR3-211ENST00000487689 NBPF12Q5TAG4 269 aaPredicted RBP6.72□□□□□ -1.33
UBR3-211ENST00000487689 OVOS1Q6IE37 1185 aa6.72□□□□□ -1.33
UBR3-211ENST00000487689 NLRC3Q7RTR2 1065 aa6.72□□□□□ -1.33
UBR3-211ENST00000487689 SIRT2Q8IXJ6 389 aa6.72□□□□□ -1.33
UBR3-211ENST00000487689 REXO1Q8N1G1 1221 aaKnown RBP6.72□□□□□ -1.33
UBR3-211ENST00000487689 TCTN2Q96GX1 697 aa6.72□□□□□ -1.33
UBR3-211ENST00000487689 HDAC8Q9BY41 377 aa6.72□□□□□ -1.33
UBR3-211ENST00000487689 SIRT5Q9NXA8 310 aa6.72□□□□□ -1.33
UBR3-211ENST00000487689 PSPNO60542 156 aa6.71□□□□□ -1.34
UBR3-211ENST00000487689 DNAJA2O60884 412 aa6.71□□□□□ -1.34
UBR3-211ENST00000487689 UBOX5O94941 541 aa6.71□□□□□ -1.34
UBR3-211ENST00000487689 VMACQ2NL98 169 aa6.71□□□□□ -1.34
UBR3-211ENST00000487689 NBPF9Q3BBW0 867 aa6.71□□□□□ -1.34
UBR3-211ENST00000487689 CDCP2Q5VXM1 449 aa6.71□□□□□ -1.34
UBR3-211ENST00000487689 LINC00116Q8NCU8 138 aa6.71□□□□□ -1.34
UBR3-211ENST00000487689 LINC01599Q8WXQ3 324 aa6.71□□□□□ -1.34
UBR3-211ENST00000487689 NKD1Q969G9 470 aa6.71□□□□□ -1.34
UBR3-211ENST00000487689 MAP6Q96JE9 813 aa6.71□□□□□ -1.34
UBR3-211ENST00000487689 DHRS1Q96LJ7 313 aa6.71□□□□□ -1.34
UBR3-211ENST00000487689 EHMT1Q9H9B1 1298 aa6.71□□□□□ -1.34
UBR3-211ENST00000487689 KCNQ5Q9NR82 932 aa6.71□□□□□ -1.34
UBR3-211ENST00000487689 PCDHB12Q9Y5F1 795 aa6.71□□□□□ -1.34
UBR3-211ENST00000487689 GREM1O60565 184 aa6.7□□□□□ -1.34
UBR3-211ENST00000487689 USP2O75604 605 aaPredicted RBP6.7□□□□□ -1.34
UBR3-211ENST00000487689 TMEM62Q0P6H9 643 aa6.7□□□□□ -1.34
UBR3-211ENST00000487689 SPATS1Q496A3 300 aa6.7□□□□□ -1.34
UBR3-211ENST00000487689 TMC3Q7Z5M5 1100 aa6.7□□□□□ -1.34
UBR3-211ENST00000487689 USHBP1Q8N6Y0 703 aa6.7□□□□□ -1.34
UBR3-211ENST00000487689 SYT8Q8NBV8 401 aa6.7□□□□□ -1.34
UBR3-211ENST00000487689 SHISA4Q96DD7 197 aa6.7□□□□□ -1.34
UBR3-211ENST00000487689 ADAM7Q9H2U9 754 aa6.7□□□□□ -1.34
UBR3-211ENST00000487689 CNNM2Q9H8M5 875 aa6.7□□□□□ -1.34
UBR3-211ENST00000487689 CRTAC1Q9NQ79 661 aa6.7□□□□□ -1.34
UBR3-211ENST00000487689 CHST7Q9NS84 486 aa6.7□□□□□ -1.34
UBR3-211ENST00000487689 MBD1Q9UIS9 605 aaPredicted RBP6.7□□□□□ -1.34
UBR3-211ENST00000487689 TAF6LQ9Y6J9 622 aa6.7□□□□□ -1.34
UBR3-211ENST00000487689 A0A1W2PQ27 194 aa6.69□□□□□ -1.34
UBR3-211ENST00000487689 A0A1W2PQ64 194 aa6.69□□□□□ -1.34
UBR3-211ENST00000487689 A0A1W2PQC6 194 aa6.69□□□□□ -1.34
UBR3-211ENST00000487689 A0A1W2PQD8 194 aa6.69□□□□□ -1.34
UBR3-211ENST00000487689 ABLIM1O14639 778 aa6.69□□□□□ -1.34
UBR3-211ENST00000487689 SIGLEC6O43699 453 aa6.69□□□□□ -1.34
UBR3-211ENST00000487689 NRDCO43847 1150 aa6.69□□□□□ -1.34
UBR3-211ENST00000487689 PRAMEF1O95521 474 aa6.69□□□□□ -1.34
UBR3-211ENST00000487689 INSRRP14616 1297 aa6.69□□□□□ -1.34
UBR3-211ENST00000487689 EPHB3P54753 998 aa6.69□□□□□ -1.34
UBR3-211ENST00000487689 SRSF3P84103 164 aaKnown RBP6.69□□□□□ -1.34
UBR3-211ENST00000487689 EFEMP1Q12805 493 aa6.69□□□□□ -1.34
UBR3-211ENST00000487689 GALNT18Q6P9A2 607 aa6.69□□□□□ -1.34
UBR3-211ENST00000487689 KIAA0825Q8IV33 1275 aa6.69□□□□□ -1.34
UBR3-211ENST00000487689 TMEM87AQ8NBN3 555 aa6.69□□□□□ -1.34
UBR3-211ENST00000487689 VWCEQ96DN2 955 aa6.69□□□□□ -1.34
UBR3-211ENST00000487689 ATG4CQ96DT6 458 aa6.69□□□□□ -1.34
UBR3-211ENST00000487689 UBP1Q9NZI7 540 aa6.69□□□□□ -1.34
UBR3-211ENST00000487689 TNFRSF10DQ9UBN6 386 aa6.69□□□□□ -1.34
UBR3-211ENST00000487689 IMPDH2P12268 514 aa6.68□□□□□ -1.34
UBR3-211ENST00000487689 POLR2BP30876 1174 aaKnown RBP6.68□□□□□ -1.34
UBR3-211ENST00000487689 RTP1P59025 263 aa6.68□□□□□ -1.34
UBR3-211ENST00000487689 CWF19L1Q69YN2 538 aaKnown RBP6.68□□□□□ -1.34
UBR3-211ENST00000487689 SP8Q8IXZ3 490 aa6.68□□□□□ -1.34
UBR3-211ENST00000487689 ZNF512BQ96KM6 892 aaPredicted RBP6.68□□□□□ -1.34
UBR3-211ENST00000487689 FCRL2Q96LA5 508 aaPredicted RBP6.68□□□□□ -1.34
UBR3-211ENST00000487689 TEPSINQ96N21 525 aa6.68□□□□□ -1.34
UBR3-211ENST00000487689 SPON2Q9BUD6 331 aa6.68□□□□□ -1.34
UBR3-211ENST00000487689 DSCC1Q9BVC3 393 aa6.68□□□□□ -1.34
UBR3-211ENST00000487689 CDADC1Q9BWV3 514 aa6.68□□□□□ -1.34
UBR3-211ENST00000487689 PRDM14Q9GZV8 571 aa6.68□□□□□ -1.34
UBR3-211ENST00000487689 EPB41L4AQ9HCS5 686 aaPredicted RBP6.68□□□□□ -1.34
UBR3-211ENST00000487689 EBF1Q9UH73 591 aa6.68□□□□□ -1.34
UBR3-211ENST00000487689 WTIPA6NIX2 430 aaPredicted RBP6.67□□□□□ -1.34
UBR3-211ENST00000487689 HRKO00198 91 aa6.67□□□□□ -1.34
UBR3-211ENST00000487689 MEIS1O00470 390 aa6.67□□□□□ -1.34
UBR3-211ENST00000487689 MPOP05164 745 aa6.67□□□□□ -1.34
UBR3-211ENST00000487689 PNLIPP16233 465 aa6.67□□□□□ -1.34
UBR3-211ENST00000487689 CLCQ05315 142 aa6.67□□□□□ -1.34
UBR3-211ENST00000487689 PUM1Q14671 1186 aaKnown RBP eCLIP6.67□□□□□ -1.34
UBR3-211ENST00000487689 NLRX1Q86UT6 975 aa6.67□□□□□ -1.34
UBR3-211ENST00000487689 NAT16Q8N8M0 369 aa6.67□□□□□ -1.34
UBR3-211ENST00000487689 SLC6A18Q96N87 628 aa6.67□□□□□ -1.34
UBR3-211ENST00000487689 NT5C1AQ9BXI3 368 aa6.67□□□□□ -1.34
UBR3-211ENST00000487689 NME1P15531 152 aaKnown RBP6.66□□□□□ -1.34
UBR3-211ENST00000487689 CRKP46108 304 aa6.66□□□□□ -1.34
UBR3-211ENST00000487689 PLP2Q04941 152 aa6.66□□□□□ -1.34
UBR3-211ENST00000487689 LAPTM5Q13571 262 aa6.66□□□□□ -1.34
UBR3-211ENST00000487689 CCDC144CPQ8IYA2 1237 aa6.66□□□□□ -1.34
UBR3-211ENST00000487689 RGS22Q8NE09 1264 aa6.66□□□□□ -1.34
UBR3-211ENST00000487689 HHIPL1Q96JK4 782 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms