RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 RTP1P59025 263 aa5.91□□□□□ -1.46
SNRNP27-204ENST00000487029 TAGLNQ01995 201 aaKnown RBP5.91□□□□□ -1.46
SNRNP27-204ENST00000487029 SNW1Q13573 536 aaKnown RBP5.91□□□□□ -1.46
SNRNP27-204ENST00000487029 BBS9Q3SYG4 887 aa5.91□□□□□ -1.46
SNRNP27-204ENST00000487029 ERICH6BQ5W0A0 696 aa5.91□□□□□ -1.46
SNRNP27-204ENST00000487029 HHIPL2Q6UWX4 724 aa5.91□□□□□ -1.46
SNRNP27-204ENST00000487029 TMC6Q7Z403 805 aa5.91□□□□□ -1.46
SNRNP27-204ENST00000487029 ENOX1Q8TC92 643 aaKnown RBP5.91□□□□□ -1.46
SNRNP27-204ENST00000487029 BORCS6Q96GS4 357 aa5.91□□□□□ -1.46
SNRNP27-204ENST00000487029 PRR36Q9H6K5 1346 aa5.91□□□□□ -1.46
SNRNP27-204ENST00000487029 GRIN3BO60391 1043 aa5.9□□□□□ -1.46
SNRNP27-204ENST00000487029 PRPF40AO75400 957 aaKnown RBP5.9□□□□□ -1.46
SNRNP27-204ENST00000487029 F13A1P00488 732 aa5.9□□□□□ -1.46
SNRNP27-204ENST00000487029 CEBPAP49715 358 aaPredicted RBP5.9□□□□□ -1.46
SNRNP27-204ENST00000487029 DAGLBQ8NCG7 672 aa5.9□□□□□ -1.46
SNRNP27-204ENST00000487029 MRRFQ96E11 262 aaKnown RBP5.9□□□□□ -1.46
SNRNP27-204ENST00000487029 BCL11AQ9H165 835 aa5.9□□□□□ -1.46
SNRNP27-204ENST00000487029 MINPP1Q9UNW1 487 aa5.9□□□□□ -1.46
SNRNP27-204ENST00000487029 FADS2P1A8MWK0 482 aa5.89□□□□□ -1.47
SNRNP27-204ENST00000487029 BUB1BO60566 1050 aaPredicted RBP5.89□□□□□ -1.47
SNRNP27-204ENST00000487029 SYPP08247 313 aa5.89□□□□□ -1.47
SNRNP27-204ENST00000487029 HSF5Q4G112 596 aaPredicted RBP5.89□□□□□ -1.47
SNRNP27-204ENST00000487029 LINC00116Q8NCU8 138 aa5.89□□□□□ -1.47
SNRNP27-204ENST00000487029 NUDT19A8MXV4 375 aa5.88□□□□□ -1.47
SNRNP27-204ENST00000487029 ABLIM1O14639 778 aa5.88□□□□□ -1.47
SNRNP27-204ENST00000487029 UBOX5O94941 541 aa5.88□□□□□ -1.47
SNRNP27-204ENST00000487029 HTR3BO95264 441 aa5.88□□□□□ -1.47
SNRNP27-204ENST00000487029 MPOP05164 745 aa5.88□□□□□ -1.47
SNRNP27-204ENST00000487029 LIMS1P48059 325 aa5.88□□□□□ -1.47
SNRNP27-204ENST00000487029 SLURP1P55000 103 aa5.88□□□□□ -1.47
SNRNP27-204ENST00000487029 PCBP3P57721 371 aaKnown RBP5.88□□□□□ -1.47
SNRNP27-204ENST00000487029 RAB3GAP1Q15042 981 aa5.88□□□□□ -1.47
SNRNP27-204ENST00000487029 CCDC84Q86UT8 332 aaPredicted RBP5.88□□□□□ -1.47
SNRNP27-204ENST00000487029 PHACTR4Q8IZ21 702 aa5.88□□□□□ -1.47
SNRNP27-204ENST00000487029 ADGRG2Q8IZP9 1017 aa5.88□□□□□ -1.47
SNRNP27-204ENST00000487029 GATAD2BQ8WXI9 593 aa5.88□□□□□ -1.47
SNRNP27-204ENST00000487029 ASCC2Q9H1I8 757 aaPredicted RBP5.88□□□□□ -1.47
SNRNP27-204ENST00000487029 KIAA1522Q9P206 1035 aaPredicted RBP5.88□□□□□ -1.47
SNRNP27-204ENST00000487029 PF4P02776 101 aa5.87□□□□□ -1.47
SNRNP27-204ENST00000487029 VAMP1P23763 118 aa5.87□□□□□ -1.47
SNRNP27-204ENST00000487029 IGFBP6P24592 240 aaPredicted RBP5.87□□□□□ -1.47
SNRNP27-204ENST00000487029 CAMK2GQ13555 558 aaPredicted RBP5.87□□□□□ -1.47
SNRNP27-204ENST00000487029 ZNF655Q8N720 491 aaPredicted RBP5.87□□□□□ -1.47
SNRNP27-204ENST00000487029 DUSP9Q99956 384 aaKnown RBP5.87□□□□□ -1.47
SNRNP27-204ENST00000487029 GPR55Q9Y2T6 319 aaPredicted RBP5.87□□□□□ -1.47
SNRNP27-204ENST00000487029 IRS2Q9Y4H2 1338 aa5.86□□□□□ -1.47
SNRNP27-204ENST00000487029 A0A1B0GTL3 188 aa5.86□□□□□ -1.47
SNRNP27-204ENST00000487029 SSU72P8A0A1W2PR75 194 aa5.86□□□□□ -1.47
SNRNP27-204ENST00000487029 BPNT1O95861 308 aa5.86□□□□□ -1.47
SNRNP27-204ENST00000487029 PRKCAP17252 672 aa5.86□□□□□ -1.47
SNRNP27-204ENST00000487029 KCNC1P48547 511 aa5.86□□□□□ -1.47
SNRNP27-204ENST00000487029 XPCQ01831 940 aaPredicted RBP5.86□□□□□ -1.47
SNRNP27-204ENST00000487029 NBPF9Q3BBW0 867 aa5.86□□□□□ -1.47
SNRNP27-204ENST00000487029 OLFML2BQ68BL8 750 aa5.86□□□□□ -1.47
SNRNP27-204ENST00000487029 GALNT18Q6P9A2 607 aa5.86□□□□□ -1.47
SNRNP27-204ENST00000487029 RPTNQ6XPR3 784 aa5.86□□□□□ -1.47
SNRNP27-204ENST00000487029 FERMT3Q86UX7 667 aa5.86□□□□□ -1.47
SNRNP27-204ENST00000487029 TNFRSF10DQ9UBN6 386 aa5.86□□□□□ -1.47
SNRNP27-204ENST00000487029 PARP2Q9UGN5 583 aa5.86□□□□□ -1.47
SNRNP27-204ENST00000487029 PLA2G2DQ9UNK4 145 aa5.86□□□□□ -1.47
SNRNP27-204ENST00000487029 MYRFQ9Y2G1 1151 aa5.86□□□□□ -1.47
SNRNP27-204ENST00000487029 RGS13O14921 159 aa5.85□□□□□ -1.47
SNRNP27-204ENST00000487029 AKAP8O43823 692 aaKnown RBP5.85□□□□□ -1.47
SNRNP27-204ENST00000487029 PRAMEF1O95521 474 aa5.85□□□□□ -1.47
SNRNP27-204ENST00000487029 GBP1P32455 592 aa5.85□□□□□ -1.47
SNRNP27-204ENST00000487029 ITGAEP38570 1179 aa5.85□□□□□ -1.47
SNRNP27-204ENST00000487029 LMNB2Q03252 620 aa5.85□□□□□ -1.47
SNRNP27-204ENST00000487029 CBX2Q14781 532 aaPredicted RBP5.85□□□□□ -1.47
SNRNP27-204ENST00000487029 VWA3BQ502W6 1294 aa5.85□□□□□ -1.47
SNRNP27-204ENST00000487029 ZFYVE27Q5T4F4 411 aa5.85□□□□□ -1.47
SNRNP27-204ENST00000487029 SLCO6A1Q86UG4 719 aa5.85□□□□□ -1.47
SNRNP27-204ENST00000487029 FBXO27Q8NI29 283 aa5.85□□□□□ -1.47
SNRNP27-204ENST00000487029 FCRL2Q96LA5 508 aaPredicted RBP5.85□□□□□ -1.47
SNRNP27-204ENST00000487029 NOC4LQ9BVI4 516 aaKnown RBP5.85□□□□□ -1.47
SNRNP27-204ENST00000487029 TNFRSF12AQ9NP84 129 aa5.85□□□□□ -1.47
SNRNP27-204ENST00000487029 ERVK13-1Q9NX77 482 aa5.85□□□□□ -1.47
SNRNP27-204ENST00000487029 WTIPA6NIX2 430 aaPredicted RBP5.84□□□□□ -1.47
SNRNP27-204ENST00000487029 RLBP1P12271 317 aa5.84□□□□□ -1.47
SNRNP27-204ENST00000487029 DAB2P98082 770 aa5.84□□□□□ -1.47
SNRNP27-204ENST00000487029 CYP4F8P98187 520 aa5.84□□□□□ -1.47
SNRNP27-204ENST00000487029 NBPF12Q5TAG4 269 aaPredicted RBP5.84□□□□□ -1.47
SNRNP27-204ENST00000487029 TMC4Q7Z404 712 aa5.84□□□□□ -1.47
SNRNP27-204ENST00000487029 GPR20Q99678 358 aa5.84□□□□□ -1.47
SNRNP27-204ENST00000487029 ACSL6Q9UKU0 697 aa5.84□□□□□ -1.47
SNRNP27-204ENST00000487029 TAF6LQ9Y6J9 622 aa5.84□□□□□ -1.47
SNRNP27-204ENST00000487029 PLA2G1BP04054 148 aaKnown RBP5.83□□□□□ -1.48
SNRNP27-204ENST00000487029 CTSHP09668 335 aa5.83□□□□□ -1.48
SNRNP27-204ENST00000487029 ARL4AP40617 200 aa5.83□□□□□ -1.48
SNRNP27-204ENST00000487029 ZNF200P98182 395 aaPredicted RBP5.83□□□□□ -1.48
SNRNP27-204ENST00000487029 PSMD2Q13200 908 aa5.83□□□□□ -1.48
SNRNP27-204ENST00000487029 LAPTM5Q13571 262 aa5.83□□□□□ -1.48
SNRNP27-204ENST00000487029 MRPL58Q14197 206 aaKnown RBP5.83□□□□□ -1.48
SNRNP27-204ENST00000487029 TAF1CQ15572 869 aaPredicted RBP5.83□□□□□ -1.48
SNRNP27-204ENST00000487029 PLEKHN1Q494U1 663 aaPredicted RBP5.83□□□□□ -1.48
SNRNP27-204ENST00000487029 LSRQ86X29 649 aaPredicted RBP5.83□□□□□ -1.48
SNRNP27-204ENST00000487029 TMEM52Q8NDY8 209 aa5.83□□□□□ -1.48
SNRNP27-204ENST00000487029 RHOVQ96L33 236 aa5.83□□□□□ -1.48
SNRNP27-204ENST00000487029 PRDM14Q9GZV8 571 aa5.83□□□□□ -1.48
SNRNP27-204ENST00000487029 MRS2Q9HD23 443 aa5.83□□□□□ -1.48
SNRNP27-204ENST00000487029 HCFC2Q9Y5Z7 792 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms