RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 TMEM265A0A087WTH1 108 aa15.23■□□□□ 0.03
SSR4-211ENST00000486204 B4E1Z4 1266 aa15.23■□□□□ 0.03
SSR4-211ENST00000486204 TTLL1O95922 423 aa15.23■□□□□ 0.03
SSR4-211ENST00000486204 XRCC5P13010 732 aaKnown RBP15.23■□□□□ 0.03
SSR4-211ENST00000486204 CCND3P30281 292 aaPredicted RBP15.23■□□□□ 0.03
SSR4-211ENST00000486204 NT5C2P49902 561 aa15.23■□□□□ 0.03
SSR4-211ENST00000486204 SMAD3P84022 425 aaKnown RBP15.23■□□□□ 0.03
SSR4-211ENST00000486204 ATP2B2Q01814 1243 aa15.23■□□□□ 0.03
SSR4-211ENST00000486204 PABPC4Q13310 644 aaKnown RBP eCLIP15.23■□□□□ 0.039e-9■■■■■ 34.3
SSR4-211ENST00000486204 NECTIN1Q15223 517 aa15.23■□□□□ 0.03
SSR4-211ENST00000486204 CASC1Q6TDU7 716 aa15.23■□□□□ 0.03
SSR4-211ENST00000486204 CATSPERGQ6ZRH7 1159 aa15.23■□□□□ 0.03
SSR4-211ENST00000486204 KIAA1211Q6ZU35 1233 aa15.23■□□□□ 0.03
SSR4-211ENST00000486204 TRMT44Q8IYL2 757 aaKnown RBP15.23■□□□□ 0.03
SSR4-211ENST00000486204 SPICE1Q8N0Z3 855 aa15.23■□□□□ 0.03
SSR4-211ENST00000486204 LPAR1Q92633 364 aa15.23■□□□□ 0.03
SSR4-211ENST00000486204 NUDT12Q9BQG2 462 aa15.23■□□□□ 0.03
SSR4-211ENST00000486204 RPAP3Q9H6T3 665 aaPredicted RBP15.23■□□□□ 0.03
SSR4-211ENST00000486204 TCP11L1Q9NUJ3 509 aa15.23■□□□□ 0.03
SSR4-211ENST00000486204 CLIP2Q9UDT6 1046 aa15.23■□□□□ 0.03
SSR4-211ENST00000486204 ZNF236Q9UL36 1845 aa15.22■□□□□ 0.03
SSR4-211ENST00000486204 USP17L15C9J2P7 530 aa15.22■□□□□ 0.03
SSR4-211ENST00000486204 USP17L13C9JLJ4 530 aa15.22■□□□□ 0.03
SSR4-211ENST00000486204 USP17L11C9JVI0 530 aa15.22■□□□□ 0.03
SSR4-211ENST00000486204 USP17L18D6R9N7 530 aa15.22■□□□□ 0.03
SSR4-211ENST00000486204 USP17L22D6RA61 530 aa15.22■□□□□ 0.03
SSR4-211ENST00000486204 USP17L17D6RBQ6 530 aa15.22■□□□□ 0.03
SSR4-211ENST00000486204 USP17L19D6RCP7 530 aa15.22■□□□□ 0.03
SSR4-211ENST00000486204 USP17L20D6RJB6 530 aa15.22■□□□□ 0.03
SSR4-211ENST00000486204 WDR46O15213 610 aaKnown RBP15.22■□□□□ 0.03
SSR4-211ENST00000486204 KDM4AO75164 1064 aa15.22■□□□□ 0.03
SSR4-211ENST00000486204 ZKSCAN1P17029 563 aaPredicted RBP15.22■□□□□ 0.03
SSR4-211ENST00000486204 USP17L24Q0WX57 530 aa15.22■□□□□ 0.03
SSR4-211ENST00000486204 C9orf50Q5SZB4 431 aa15.22■□□□□ 0.03
SSR4-211ENST00000486204 RCSD1Q6JBY9 416 aa15.22■□□□□ 0.03
SSR4-211ENST00000486204 LRRC47Q8N1G4 583 aaKnown RBP15.22■□□□□ 0.03
SSR4-211ENST00000486204 ESR2Q92731 530 aa15.22■□□□□ 0.03
SSR4-211ENST00000486204 E7EWF7 191 aa15.21■□□□□ 0.03
SSR4-211ENST00000486204 F5H6K3 240 aa15.21■□□□□ 0.03
SSR4-211ENST00000486204 SLC27A2O14975 620 aa15.21■□□□□ 0.03
SSR4-211ENST00000486204 NDUFB10O96000 172 aa15.21■□□□□ 0.03
SSR4-211ENST00000486204 ATN1P54259 1190 aaPredicted RBP15.21■□□□□ 0.03
SSR4-211ENST00000486204 HERVK_113P62684 666 aa15.21■□□□□ 0.03
SSR4-211ENST00000486204 IRX3P78415 501 aaPredicted RBP15.21■□□□□ 0.03
SSR4-211ENST00000486204 KLRC3Q07444 240 aa15.21■□□□□ 0.03
SSR4-211ENST00000486204 GMCL1P1Q8NEA9 526 aa15.21■□□□□ 0.03
SSR4-211ENST00000486204 SOCS4Q8WXH5 440 aa15.21■□□□□ 0.03
SSR4-211ENST00000486204 P2RX7Q99572 595 aaKnown RBP15.21■□□□□ 0.03
SSR4-211ENST00000486204 CNNM2Q9H8M5 875 aa15.21■□□□□ 0.03
SSR4-211ENST00000486204 GOPCQ9HD26 462 aa15.21■□□□□ 0.03
SSR4-211ENST00000486204 ZSWIM5Q9P217 1185 aa15.21■□□□□ 0.03
SSR4-211ENST00000486204 MORF4L1Q9UBU8 362 aa15.21■□□□□ 0.03
SSR4-211ENST00000486204 CDH23Q9H251 3354 aa15.21■□□□□ 0.03
SSR4-211ENST00000486204 DNAH12Q6ZR08 3092 aa15.2■□□□□ 0.02
SSR4-211ENST00000486204 SPDYE16A6NNV3 312 aaPredicted RBP15.2■□□□□ 0.02
SSR4-211ENST00000486204 COL9A3Q14050 684 aaPredicted RBP15.2■□□□□ 0.02
SSR4-211ENST00000486204 CREB3L3Q68CJ9 461 aa15.2■□□□□ 0.02
SSR4-211ENST00000486204 LBX2Q6XYB7 198 aa15.2■□□□□ 0.02
SSR4-211ENST00000486204 CYB5R4Q7L1T6 521 aa15.2■□□□□ 0.02
SSR4-211ENST00000486204 RASGRP2Q7LDG7 609 aa15.2■□□□□ 0.02
SSR4-211ENST00000486204 NUP88Q99567 741 aaPredicted RBP15.2■□□□□ 0.02
SSR4-211ENST00000486204 ZKSCAN3Q9BRR0 538 aa15.2■□□□□ 0.02
SSR4-211ENST00000486204 KRT23Q9C075 422 aa15.2■□□□□ 0.02
SSR4-211ENST00000486204 TXNRD2Q9NNW7 524 aa15.2■□□□□ 0.02
SSR4-211ENST00000486204 STX8Q9UNK0 236 aa15.2■□□□□ 0.02
SSR4-211ENST00000486204 PEX10O60683 326 aa15.19■□□□□ 0.02
SSR4-211ENST00000486204 HOXD11P31277 338 aaPredicted RBP15.19■□□□□ 0.02
SSR4-211ENST00000486204 PPP4R3BQ5MIZ7 849 aa15.19■□□□□ 0.02
SSR4-211ENST00000486204 FAM83BQ5T0W9 1011 aa15.19■□□□□ 0.02
SSR4-211ENST00000486204 MB21D2Q8IYB1 491 aaPredicted RBP15.19■□□□□ 0.02
SSR4-211ENST00000486204 USP38Q8NB14 1042 aa15.19■□□□□ 0.02
SSR4-211ENST00000486204 TMEM47Q9BQJ4 181 aa15.19■□□□□ 0.02
SSR4-211ENST00000486204 TANGO6Q9C0B7 1094 aa15.19■□□□□ 0.02
SSR4-211ENST00000486204 LCTP09848 1927 aa15.19■□□□□ 0.02
SSR4-211ENST00000486204 TNKSO95271 1327 aa15.18■□□□□ 0.02
SSR4-211ENST00000486204 CNMDO75829 334 aa15.18■□□□□ 0.02
SSR4-211ENST00000486204 ANTXR2P58335 489 aa15.18■□□□□ 0.02
SSR4-211ENST00000486204 RTP1P59025 263 aa15.18■□□□□ 0.02
SSR4-211ENST00000486204 SEC23AQ15436 765 aa15.18■□□□□ 0.02
SSR4-211ENST00000486204 CCL14Q16627 93 aa15.18■□□□□ 0.02
SSR4-211ENST00000486204 ENAHQ8N8S7 591 aaPredicted RBP15.18■□□□□ 0.02
SSR4-211ENST00000486204 GPRC5AQ8NFJ5 357 aa15.18■□□□□ 0.02
SSR4-211ENST00000486204 TTC14Q96N46 770 aa15.18■□□□□ 0.02
SSR4-211ENST00000486204 FBXO28Q9NVF7 368 aa15.18■□□□□ 0.02
SSR4-211ENST00000486204 RBPJLQ9UBG7 517 aa15.18■□□□□ 0.02
SSR4-211ENST00000486204 BAZ2BQ9UIF8 2168 aaKnown RBP15.17■□□□□ 0.02
SSR4-211ENST00000486204 TOP1P11387 765 aaKnown RBP15.17■□□□□ 0.02
SSR4-211ENST00000486204 DSG3P32926 999 aa15.17■□□□□ 0.02
SSR4-211ENST00000486204 RGS2P41220 211 aa15.17■□□□□ 0.02
SSR4-211ENST00000486204 COG2Q14746 738 aa15.17■□□□□ 0.02
SSR4-211ENST00000486204 SLFN13Q68D06 897 aa15.17■□□□□ 0.02
SSR4-211ENST00000486204 IQCA1Q86XH1 822 aa15.17■□□□□ 0.02
SSR4-211ENST00000486204 DGKHQ86XP1 1220 aa15.17■□□□□ 0.02
SSR4-211ENST00000486204 RASEFQ8IZ41 740 aa15.17■□□□□ 0.02
SSR4-211ENST00000486204 NCOA7Q8NI08 942 aa15.17■□□□□ 0.02
SSR4-211ENST00000486204 GTF3C2Q8WUA4 911 aaPredicted RBP15.17■□□□□ 0.02
SSR4-211ENST00000486204 ANKS1AQ92625 1134 aa15.17■□□□□ 0.02
SSR4-211ENST00000486204 USP6NLQ92738 828 aa15.17■□□□□ 0.02
SSR4-211ENST00000486204 BADQ92934 168 aa15.17■□□□□ 0.02
SSR4-211ENST00000486204 KCNB2Q92953 911 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms