RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 TMA7Q9Y2S6 64 aaKnown RBP8.55□□□□□ -1.04
SF3B1-210ENST00000482158 H0Y8X5 98 aa8.54□□□□□ -1.04
SF3B1-210ENST00000482158 H3BS24 57 aa8.54□□□□□ -1.04
SF3B1-210ENST00000482158 MEIS1O00470 390 aa8.54□□□□□ -1.04
SF3B1-210ENST00000482158 GRIA2P42262 883 aa8.54□□□□□ -1.04
SF3B1-210ENST00000482158 CLCN7P51798 805 aa8.54□□□□□ -1.04
SF3B1-210ENST00000482158 PPP2R5DQ14738 602 aa8.54□□□□□ -1.04
SF3B1-210ENST00000482158 IFI16Q16666 785 aaKnown RBP8.54□□□□□ -1.04
SF3B1-210ENST00000482158 MSMPQ1L6U9 139 aa8.54□□□□□ -1.04
SF3B1-210ENST00000482158 GAB4Q2WGN9 574 aa8.54□□□□□ -1.04
SF3B1-210ENST00000482158 FOXB2Q5VYV0 432 aa8.54□□□□□ -1.04
SF3B1-210ENST00000482158 SDE2Q6IQ49 451 aa8.54□□□□□ -1.04
SF3B1-210ENST00000482158 TSPYL5Q86VY4 417 aaPredicted RBP8.54□□□□□ -1.04
SF3B1-210ENST00000482158 TRIM59Q8IWR1 403 aa8.54□□□□□ -1.04
SF3B1-210ENST00000482158 LRRC47Q8N1G4 583 aaKnown RBP8.54□□□□□ -1.04
SF3B1-210ENST00000482158 DAGLBQ8NCG7 672 aa8.54□□□□□ -1.04
SF3B1-210ENST00000482158 THAP3Q8WTV1 239 aaPredicted RBP8.54□□□□□ -1.04
SF3B1-210ENST00000482158 SUGT1Q9Y2Z0 365 aa8.54□□□□□ -1.04
SF3B1-210ENST00000482158 IQCA1LA6NCM1 817 aa8.53□□□□□ -1.04
SF3B1-210ENST00000482158 PPP2R2AP63151 447 aa8.53□□□□□ -1.04
SF3B1-210ENST00000482158 ZBTB38Q8NAP3 1195 aaPredicted RBP8.53□□□□□ -1.04
SF3B1-210ENST00000482158 PPP1R14AQ96A00 147 aa8.53□□□□□ -1.04
SF3B1-210ENST00000482158 TCTN2Q96GX1 697 aa8.53□□□□□ -1.04
SF3B1-210ENST00000482158 SNX11Q9Y5W9 270 aa8.53□□□□□ -1.04
SF3B1-210ENST00000482158 PITPNM2Q9BZ72 1349 aa8.53□□□□□ -1.04
SF3B1-210ENST00000482158 YOD1Q5VVQ6 348 aaPredicted RBP8.52□□□□□ -1.05
SF3B1-210ENST00000482158 CRTC3Q6UUV7 619 aa8.52□□□□□ -1.05
SF3B1-210ENST00000482158 THAP5Q7Z6K1 395 aa8.52□□□□□ -1.05
SF3B1-210ENST00000482158 ZNF655Q8N720 491 aaPredicted RBP8.52□□□□□ -1.05
SF3B1-210ENST00000482158 UBE2FQ969M7 185 aa8.52□□□□□ -1.05
SF3B1-210ENST00000482158 MCMBPQ9BTE3 642 aa8.52□□□□□ -1.05
SF3B1-210ENST00000482158 DSCC1Q9BVC3 393 aa8.52□□□□□ -1.05
SF3B1-210ENST00000482158 ASCC2Q9H1I8 757 aaPredicted RBP8.52□□□□□ -1.05
SF3B1-210ENST00000482158 GPATCH2Q9NW75 528 aa8.52□□□□□ -1.05
SF3B1-210ENST00000482158 ZSWIM5Q9P217 1185 aa8.52□□□□□ -1.05
SF3B1-210ENST00000482158 LRP2BPQ9P2M1 347 aa8.52□□□□□ -1.05
SF3B1-210ENST00000482158 PTCH2Q9Y6C5 1203 aa8.52□□□□□ -1.05
SF3B1-210ENST00000482158 TMEM265A0A087WTH1 108 aa8.51□□□□□ -1.05
SF3B1-210ENST00000482158 ESYT3A0FGR9 886 aa8.51□□□□□ -1.05
SF3B1-210ENST00000482158 AGRPO00253 132 aa8.51□□□□□ -1.05
SF3B1-210ENST00000482158 NOP56O00567 594 aaKnown RBP8.51□□□□□ -1.05
SF3B1-210ENST00000482158 ENPP3O14638 875 aa8.51□□□□□ -1.05
SF3B1-210ENST00000482158 VAMP4O75379 141 aa8.51□□□□□ -1.05
SF3B1-210ENST00000482158 KCNH1O95259 989 aa8.51□□□□□ -1.05
SF3B1-210ENST00000482158 MED26O95402 600 aa8.51□□□□□ -1.05
SF3B1-210ENST00000482158 TPP2P29144 1249 aaPredicted RBP8.51□□□□□ -1.05
SF3B1-210ENST00000482158 CYP4F3Q08477 520 aa8.51□□□□□ -1.05
SF3B1-210ENST00000482158 GRB10Q13322 594 aa8.51□□□□□ -1.05
SF3B1-210ENST00000482158 CLEC16AQ2KHT3 1053 aa8.51□□□□□ -1.05
SF3B1-210ENST00000482158 USHBP1Q8N6Y0 703 aa8.51□□□□□ -1.05
SF3B1-210ENST00000482158 BTN2A2Q8WVV5 523 aa8.51□□□□□ -1.05
SF3B1-210ENST00000482158 ZDHHC15Q96MV8 337 aa8.51□□□□□ -1.05
SF3B1-210ENST00000482158 TRIT1Q9H3H1 467 aaKnown RBP8.51□□□□□ -1.05
SF3B1-210ENST00000482158 ATP13A1Q9HD20 1204 aa8.51□□□□□ -1.05
SF3B1-210ENST00000482158 TMEM260Q9NX78 707 aa8.51□□□□□ -1.05
SF3B1-210ENST00000482158 GSNP06396 782 aa8.5□□□□□ -1.05
SF3B1-210ENST00000482158 HSP90AA2PQ14568 343 aaPredicted RBP8.5□□□□□ -1.05
SF3B1-210ENST00000482158 SF1Q15637 639 aaKnown RBP8.5□□□□□ -1.05
SF3B1-210ENST00000482158 LONRF2Q1L5Z9 754 aa8.5□□□□□ -1.05
SF3B1-210ENST00000482158 GTF2IRD2BQ6EKJ0 949 aa8.5□□□□□ -1.05
SF3B1-210ENST00000482158 GTF2IRD2Q86UP8 949 aa8.5□□□□□ -1.05
SF3B1-210ENST00000482158 WFDC3Q8IUB2 231 aa8.5□□□□□ -1.05
SF3B1-210ENST00000482158 FAM177A1Q8N128 213 aaPredicted RBP8.5□□□□□ -1.05
SF3B1-210ENST00000482158 SF3B6Q9Y3B4 125 aaKnown RBP8.5□□□□□ -1.05
SF3B1-210ENST00000482158 ESR1P03372 595 aa8.49□□□□□ -1.05
SF3B1-210ENST00000482158 EXOC2Q96KP1 924 aa8.49□□□□□ -1.05
SF3B1-210ENST00000482158 AARSD1Q9BTE6 412 aaKnown RBP8.49□□□□□ -1.05
SF3B1-210ENST00000482158 RNF112Q9ULX5 631 aa8.49□□□□□ -1.05
SF3B1-210ENST00000482158 TRAV20A0A0B4J274 112 aa8.48□□□□□ -1.05
SF3B1-210ENST00000482158 FGFR1P11362 822 aa8.48□□□□□ -1.05
SF3B1-210ENST00000482158 VAV1P15498 845 aa8.48□□□□□ -1.05
SF3B1-210ENST00000482158 BMP8BP34820 402 aa8.48□□□□□ -1.05
SF3B1-210ENST00000482158 PRKCQQ04759 706 aa8.48□□□□□ -1.05
SF3B1-210ENST00000482158 FAM209AQ5JX71 171 aa8.48□□□□□ -1.05
SF3B1-210ENST00000482158 EGFLAMQ63HQ2 1017 aa8.48□□□□□ -1.05
SF3B1-210ENST00000482158 POMZP3Q6PJE2 187 aa8.48□□□□□ -1.05
SF3B1-210ENST00000482158 KISS1RQ969F8 398 aaPredicted RBP8.48□□□□□ -1.05
SF3B1-210ENST00000482158 OSBP2Q969R2 916 aa8.48□□□□□ -1.05
SF3B1-210ENST00000482158 HRASLS5Q96KN8 279 aa8.48□□□□□ -1.05
SF3B1-210ENST00000482158 FCRL3Q96P31 734 aaPredicted RBP8.48□□□□□ -1.05
SF3B1-210ENST00000482158 SLC12A9Q9BXP2 914 aa8.48□□□□□ -1.05
SF3B1-210ENST00000482158 NKX2-4Q9H2Z4 354 aa8.48□□□□□ -1.05
SF3B1-210ENST00000482158 FANCLQ9NW38 375 aa8.48□□□□□ -1.05
SF3B1-210ENST00000482158 GPR55Q9Y2T6 319 aaPredicted RBP8.48□□□□□ -1.05
SF3B1-210ENST00000482158 ZNF205O95201 554 aa8.47□□□□□ -1.05
SF3B1-210ENST00000482158 L1CAMP32004 1257 aa8.47□□□□□ -1.05
SF3B1-210ENST00000482158 CD96P40200 585 aa8.47□□□□□ -1.05
SF3B1-210ENST00000482158 BNIP3Q12983 259 aa8.47□□□□□ -1.05
SF3B1-210ENST00000482158 AOC3Q16853 763 aa8.47□□□□□ -1.05
SF3B1-210ENST00000482158 DPY19L1Q2PZI1 675 aa8.47□□□□□ -1.05
SF3B1-210ENST00000482158 TMPRSS7Q7RTY8 843 aa8.47□□□□□ -1.05
SF3B1-210ENST00000482158 CRACR2BQ8N4Y2 399 aaPredicted RBP8.47□□□□□ -1.05
SF3B1-210ENST00000482158 LINC00116Q8NCU8 138 aa8.47□□□□□ -1.05
SF3B1-210ENST00000482158 ZSWIM2Q8NEG5 633 aa8.47□□□□□ -1.05
SF3B1-210ENST00000482158 FOXP3Q9BZS1 431 aa8.47□□□□□ -1.05
SF3B1-210ENST00000482158 DUSP13Q9UII6 198 aa8.47□□□□□ -1.05
SF3B1-210ENST00000482158 VAV3Q9UKW4 847 aa8.47□□□□□ -1.05
SF3B1-210ENST00000482158 PCDHA11Q9Y5I1 949 aa8.47□□□□□ -1.05
SF3B1-210ENST00000482158 PRODHO43272 600 aa8.46□□□□□ -1.06
SF3B1-210ENST00000482158 DLX3O60479 287 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms