RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 GALNT15Q8N3T1 639 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 MLKLQ8NB16 471 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 RASSF8Q8NHQ8 419 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 EYA1Q99502 592 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 SYT11Q9BT88 431 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 NAT10Q9H0A0 1025 aaKnown RBP4.64□□□□□ -1.67
USP16-205ENST00000474835 CYLDQ9NQC7 956 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 LMCD1Q9NZU5 365 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 STK26Q9P289 416 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 TTC7AQ9ULT0 858 aaPredicted RBP4.64□□□□□ -1.67
USP16-205ENST00000474835 KAT6BQ8WYB5 2073 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 TMEM221A6NGB7 291 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 BTBD19C9JJ37 291 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 POLR3GO15318 223 aaPredicted RBP4.63□□□□□ -1.67
USP16-205ENST00000474835 CBFA2T2O43439 604 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 APPP05067 770 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 LMAN1P49257 510 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 PIP4K2BP78356 416 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 FOXO4P98177 505 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 CDC37Q16543 378 aaPredicted RBP4.63□□□□□ -1.67
USP16-205ENST00000474835 USP41Q3LFD5 358 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 CGB2Q6NT52 195 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 SLFN11Q7Z7L1 901 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 DRC7Q8IY82 874 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 RASGEF1CQ8N431 466 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 RRP36Q96EU6 259 aaKnown RBP4.63□□□□□ -1.67
USP16-205ENST00000474835 TFIP11Q9UBB9 837 aaKnown RBP4.63□□□□□ -1.67
USP16-205ENST00000474835 TAOK2Q9UL54 1235 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 MYO6Q9UM54 1294 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 C15orf41Q9Y2V0 281 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 AKR1B15C9JRZ8 316 aaPredicted RBP4.63□□□□□ -1.67
USP16-205ENST00000474835 ASAP2O43150 1006 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 HMOX1P09601 288 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 HSP90B1P14625 803 aaKnown RBP4.63□□□□□ -1.67
USP16-205ENST00000474835 SKIV2L2P42285 1042 aaKnown RBP4.63□□□□□ -1.67
USP16-205ENST00000474835 RBL2Q08999 1139 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 ITIH4Q14624 930 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 RRS1Q15050 365 aaKnown RBP4.63□□□□□ -1.67
USP16-205ENST00000474835 HSP90AB4PQ58FF6 505 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 FOXD4L5Q5VV16 416 aaPredicted RBP4.63□□□□□ -1.67
USP16-205ENST00000474835 ANO1Q5XXA6 986 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 Q6ZUG5 572 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 C3orf62Q6ZUJ4 267 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 HDGFL2Q7Z4V5 671 aaPredicted RBP4.63□□□□□ -1.67
USP16-205ENST00000474835 MFN1Q8IWA4 741 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 SLC35F6Q8N357 371 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 FNBP4Q8N3X1 1017 aaPredicted RBP4.63□□□□□ -1.67
USP16-205ENST00000474835 PHC3Q8NDX5 983 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 IGDCC4Q8TDY8 1250 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 ATP8B4Q8TF62 1192 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 SCFD2Q8WU76 684 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 FOXD4L4Q8WXT5 416 aaPredicted RBP4.63□□□□□ -1.67
USP16-205ENST00000474835 SYTL4Q96C24 671 aaPredicted RBP4.63□□□□□ -1.67
USP16-205ENST00000474835 EPB41L1Q9H4G0 881 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 PHAXQ9H814 394 aaKnown RBP4.63□□□□□ -1.67
USP16-205ENST00000474835 LEMD3Q9Y2U8 911 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 NR2E3Q9Y5X4 410 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 GMEB1Q9Y692 573 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 GJB6O95452 261 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 ATP1A1P05023 1023 aaKnown RBP4.63□□□□□ -1.67
USP16-205ENST00000474835 GNAQP50148 359 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 PHEXP78562 749 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 GOLGA8FQ08AF8 430 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 GOLGA8DPQ0D2H9 430 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 PABPC4Q13310 644 aaKnown RBP eCLIP4.63□□□□□ -1.672e-11■■■■■ 76.6
USP16-205ENST00000474835 ALX1Q15699 326 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 ACCSLQ4AC99 568 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 FILIP1LQ4L180 1135 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 ERMARDQ5T6L9 678 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 HGSNATQ68CP4 663 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 NBPF5PQ86XG9 351 aaPredicted RBP4.63□□□□□ -1.67
USP16-205ENST00000474835 HDAC7Q8WUI4 952 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 RNPC3Q96LT9 517 aaKnown RBP4.63□□□□□ -1.67
USP16-205ENST00000474835 NEK1Q96PY6 1258 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 CDC5LQ99459 802 aaKnown RBP4.63□□□□□ -1.67
USP16-205ENST00000474835 STK31Q9BXU1 1019 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 AATFQ9NY61 560 aaKnown RBP eCLIP4.63□□□□□ -1.67
USP16-205ENST00000474835 CNOT8Q9UFF9 292 aaKnown RBP4.63□□□□□ -1.67
USP16-205ENST00000474835 XDHP47989 1333 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 SPATA31A5Q5VU36 1347 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 SPATA31A6Q5VVP1 1343 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 SPATA31A7Q8IWB4 1347 aa4.63□□□□□ -1.67
USP16-205ENST00000474835 E7ENQ6 273 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 E7EWF7 191 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 SMAPO00193 183 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 FOXN1O15353 648 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 ORC4O43929 436 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 FAM155BO75949 473 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 VIMP08670 466 aaKnown RBP4.62□□□□□ -1.67
USP16-205ENST00000474835 SCTRP47872 440 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 IFFO1Q0D2I5 559 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 IL17AQ16552 155 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 CLEC16AQ2KHT3 1053 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 RRP12Q5JTH9 1297 aaKnown RBP4.62□□□□□ -1.67
USP16-205ENST00000474835 AGBL2Q5U5Z8 902 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 SPATA1Q5VX52 437 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 TMED8Q6PL24 325 aaPredicted RBP4.62□□□□□ -1.67
USP16-205ENST00000474835 IQCA1Q86XH1 822 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 PARP9Q8IXQ6 854 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 LMBR1Q8WVP7 490 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms